XLOC_006320 (gene) - C. hemisphaerica

Overview
NameXLOC_006320
Unique NameXLOC_006320
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000124:255588..262131+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006320 ID=XLOC_006320|Name=XLOC_006320|organism=Clytia hemisphaerica|type=gene|length=6544bp|location=Sequence derived from alignment at sc0000124:255588..262131+ (Clytia hemisphaerica)
CCAGTGAAAGACTTAAATTGATAGCATTCATTGCAGCATAATCTTTACTT TACTGCACAGTCACTCATGTCTGTAACTTTCTATTTAGAGACCAAAATAT ATGctaaaaatatgctcaaaatGAACAAAGATTCTGATGCTGAACATCTA CACAATGGCAAGGCTGTAATATCAGATCAAGGCACTGAACAATCTATTGA AGTTTCATTTGAACCTGAAGGAGAGACAAAAACATTTCCAGAGTTGTTAG CAGATCCAGCCGTGGAAATTGTAGATGAATTTGATATAAACACTGTGCAA TCTCCTGAAGATTTAGGCATAGCTCGTGAAGTTGAAAATATAATCTCTTC ACAAACATCACAACAACAAAATGTAGAAAACGAACCACTTAAATTGGATG ACGTTTCTTGGCAGTCAGAACAGTTTAAAAAGCTTCCCAATAAGCCTGGC ATTGAAGATCTAATCTCAAATCCTTCTGATAACAGTGTTCAAGAGGTGTC AATAAAATCTCCTATTGAAACTTCAAAACTCACAGAAGACAAGTTTGAAG AGAAAATTCCATCAACAGAAAAGCAAGGGGAAGAGAATGAGAACCACAGT GAAGTTTCTACACAAGAAAAATATCCGCAAGAAGATAGAACAGAGAATCT GCGTCACAGTAAAACTACTTTACAAGATGAATCGGCGGATAAGGATCACA GTGAAGTTTCTTCACAGGAGAAACATCTTTTTCATCAGGAAGATGGATCA GAAGATGAGGATCCCAATGAAACTATTTTACAAGAGGGACATCTTTCTGT CCAAGAAGATGAAACCAAGGACAAGCTTCACAGTGAAACTGCTTTACAAG AGAAACATCTTTCTGTCCAATTTCAAGTCCAAGAAGAAGGTGCAGAAGAG GATTCAGAAGAAATCATTGTAGTAGCAATCATTGAAGAAGACTATAAAGA ATGCAATACTTCAAATGGTATGTTAACAAAAATATACAATCACTCGTAAT GCTGCCAATTtaagaaaataactttttccaactttttggacctacctccg ggtgccccggtggaggtcctatgaattaacctctgtctgttcgtccgNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacgctatgttttctga ctgattttttttcatttttctccttgcattgctatctaactttcatcatc aggtaggtccattcagcatctagcttgtttttattagtttgttctgattt tttgcagaaagatgcgtattcgcaatgctcaaaacatagccgagtccgat ttttgagaacaatttttttccggttgaaaattccgtttttgcagattttc attggattttttccttatatttctatgtttttcacacaaaaacattattg ataacaatgctcaccatcaagcatgattcgattgtcaataaaactgattt ttgcgtccacaactttctatttattttttccttacaatccttccatcaat caatgatgaatttcttgcgttatgcattttcgctaaacgctatgtcttct gactgattttttttcatttttctccttgcattgctatctaactttcatca tcaggtaggtccattcagcatctagcttgtttaatCGTGGCAATACTAGG TCACAATTCGCAAGCAAACTACGAGTGTAACTAGTGTAATATTCTGTTTA CCACAACATCttgttttctttcttgaatttttactaaaaaatcaaaaaga tgtTTATATTCGGATTTTGCTGCTTATCATATTTCATTAAGGTATGTCTa taaatcgcgatcttaaaatcttNaacttaaaaagtgtcttaggattttat ttctaaccgagttgtttttcctcaatttacagataactgaaaaaatcaca tttaaatttacttttttatcgatgtttttacagaatttaggatttaaaga gttaaagtcaatcccaaaaaaaatcccaagatacttttttagttcaatct attgggaacatagtatcgaaattattttttcaaaattcaaaagctatggg tgactttaacttctttgaagtaggtaaggttaaaatcttaagattttaat tatatcctgcccagttttttaaattcagctgaaacttttaccattagaaa gagattattattggctttcagaaaatatatacttttgatatataaaaatt tgttgttctgaagatatgatcaattaaagagaatgtgtcaagaaaggtga acacataccttaaattGTCTGGTTTTGCTGGTTTTTTAAGTGTAACTAGT GTAACCTAAAAATCTTGGGACAACAATCCCTCCCATTAATAATAACATTT CATTGGCTGTAGATAATTCGTTTTGGAACAAAATATAACTGCTATGTGGG TGTACATTCTTAGCCAGTCACTTAACGCCTTATATTATAGCCATAGGcca tgatttttttcaactgTTAACTTGCCTATTGCAATTTGTCATCTACCATT TAGCAAAATATTGTACTGTATTGTCATGTTTCCCTCATTTTGTTTCTGAT TGATATGAATTTTCTCGTTTTGTAGCTGAGGAGACAATATcaaaaagata tccaaagcgAAAAAGGAAGAGGTCGAAAGCTTATAAGGATGACCTTGATG ATGAAGACCTGGATAATGAAGACCTGAACGAGACTGTTacaaagaagatg aaaaatgataaGAAGAAAACAGGGAAATCACAAAAAGCCAAAAAGGGGGT AAATGCAAAAAACAAAACCTCCCCAAAGAAAGCCAAGACAGTAAACAACA AAAGTGAAATTGAGGAAGATTTGTCAGATGAAAGTTCTCAACAAGAAGAA AATCATACAATAAGTTATGAAATTTACTCGTGTAAAACTTGTCATCAGAT TTTCACTAGGAAAGGTAACTTAAAACAACACATGAAGATTCACACTAGGG ATAATGAGATCAAGTGTGAAGTTTGTGGGAAACGATTTGTAAGAATGTCC AATTTTACAACACATTTGAGGACTCACACTGGGGAAAAACCTCACCAATG TGACTTTTGTCCTATGCGATTTGGCCGCAGTGATCATTTGAAAGAACATC TCAGAAGTCATACAGGCGAAAGACCTTACAATTGTGAAACATGTGACAAG AGTTTCTTTACAGGTATAATATTAATTTCCCTATCTTCCATGCTCTTTTA GTTTTTGTAAAGTATATTCAAAATTATTAAGCCTctcgatgttcttaact ttttgagttttaagtctgaaaaaatttttattcttgcctttttTTTGTGA CTGTTTTTGTGTGATCTcttaaaaaatgaaatgttttagAACCATCAAAG CCTTTATGTTCTTATTATGTTTTgtctttcacaaaaaatatttccattcT GTTTCTTTATCATTATCAATAAAGAAGTTGGTGTTGCCGGTGCTTTGTTC TCTTCCACCTTTAATTTATGtgaattaatttttaatttccccATTTCCCC AAAAATGAGATTATCCTGCTGGAATtgttgggccattccattttgtatca atacagggggtggacgaacatttccaggagtattttttcatttttccacg GGTTAAaaggttattctaaaatttccaaggcgTAAAGGACTGATTTTAGT TTGTCAACCCTCACTTCTATCTAAggtacaaaaagaattttccaagggtt ctttgGAAatcttgccattttccagggagtATCCACAAATCtttaagaat ctttttttgccttgaaaaggttcgtccaccctctgtatggaaattttaat GGAATAACCCATTGGGATTAGGAAACTTATAAAGAAAAACCCTTTAATTT CATGATGCCATTTCCTTTCTTACTTACTgtaaaaaaatcccaaaacaaGC AAGTTTATCAAAATTTGCATTGGAGATTCCTTTTCGCAACATTTTCATAA GCAAAAACTAAAAGTGAATTAATAATTTATAAGACTCTTTTTAGGTATTT TTTACCACTTTGACTTTTACACACCTTTTATAAGCAAATACAATTTTTGG GGCATGGTTTGAGTTGCTCAGAATTTGGGTCATTTTCTGAAATATCTGAA ATATCTATACCCCCTGATATCATAGGATATATTTTATGgttattgggtca agggctataTTGTCTGTCATGGTTAGAAGAAAGTTTTTACTTTTACaaga tgatgaaaaaaaatcataaattatcTTTACAACAAGCAAGTTCAAACCAA AATTCGCattggagatttttttctcatttgcataaaacctttttttagta aaacaaaaagtaaattaTCTCTATCTCTTAACATTCAGGTACAGCGTTAA AGAATCACAACCGTATCCACACCGGTGAAAAACCATACAAATGTAAAAAA TGCCAAGAATCTTTTAGACAACAAAGTATGTTGATATACCATCTCGAATC GAAGTGTGGTGATTGCAAATTCACGTGTGAAACTTGTTCAAAGACATTCA CTTCATCTAGAGGTCTCAGAGAGCACATGTTGTGTCATAGTACTGAACGC CCTCATAAATGCACAGTTTGTGAGAAATCATTTGTACGGTTATCACATCT CAGAGAACACACTTTAACACATATGCCTGCAGACCATGAAGCTTATCATT GTCCAGTATGTGCGCAGACTTTTTCTACCAAAGGAAAATTATCAAGACAT AAATCAATGCATTCCGAAAAACCACCACCAGTTTGTGATGTTTGTGGTAA AGAATTTAAAGTTCTTGGTGATATGAGGTTACACAAGAAACGTGTCCACA GTACTGAACGTCCATATAAATGCGAAGTCTGTCCGAAAACGTTTGCACAG CGATCCAATCTAAAGAAACATTTACGTCTACATACAGGTGAGAAACCATT CAAATGTGAGTTCTGTGGAACTTGCTTTGCTCAAAATGGAAATCTGGAAA GTCACAAACGTACACATACTGGGGAGAAGCCTTACCAGTGTGATCAATGT GAAAGTAGATTCGCACAGCTTTCGAATCTCAAAAAGCATGCTTTGACACA CCATCAGAGCAAAACTTTAACAGAATATTCGACGTCCAATTTGAATCCTT TAGAATCTCTTCTTGACCAACAACAGAGCATTAATTTCAACATGACATCT GTGACAATACCTGGCGATGACTCATTACAAACCATAAATGCATCAAGTAT ACGCCTTTGAATGTTACTTAATGTAATTATTTAACCAAATCATCTCTGGG ATTTACATGGACATTGCTACTAACAATAATTTCAGAATTTGTAAATGGCA TTCTAAGAAAGATTTCTACAAGACTATATTCATGAATGAATCCTAAATTG AGAATTTGATACATAGTTTATATTATGAAATTTAACTATTTACAGAATTT CTGGTTCTAAAATCTATAACTTTTTTGCTCATCTAAAGTTTATTATAATG acatttctttaataattgaTTCTTTCAGGGGGTTAGGGAGCAGGCTGCTA AGCATTGATATTTGAAAGTAGTTGACACCATCACGTCTTCTTATTTTAGT ACTAACCCCAACTAGAAATATCAATATTTAGAAAGAAAGGAGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011274TCONS_00011274Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011274-proteinTCONS_00011274-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000124supercontigsc0000124:255588..262131 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.64 5.5 2.89 1.72 9.63 7.72 9.33 9.67 4.94 4.9 5.5 4.25 4.04 3.95 3.96 4.16 4.91 5.84 3.45 2.7 3.28 2.57 13.09 12.22 10.92 10.28 1.98 1.64 9.87 11.64