XLOC_026740 (gene) - C. hemisphaerica

Overview
NameXLOC_026740
Unique NameXLOC_026740
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003833:5000..9011-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026740 ID=XLOC_026740|Name=XLOC_026740|organism=Clytia hemisphaerica|type=gene|length=4012bp|location=Sequence derived from alignment at sc0003833:5000..9011- (Clytia hemisphaerica)
TTCTTCCTGGAGGAGAGAAATTTCGACATAAACAACACTCCCCCCTTCAT
GTGCCTGACCTGTCATGCCAAATTAAAAAACATGAAAAGGGCTTCTTCAA
CTGCAAAACTAATTTTGCCTAAATGGGGCCCTCACCAACAAGAAAACTGC
ATCTGTAACCGAAGATTTAATTCTACTGAAATAGTTCCCCAATCGAAAGC
AGGCCGAACGCCAAAGAAAACAAGGAAGAACAAGGGTAGACCATCCCATA
CTTCTACCTCTATTTGGTCAAGAGGAATGGCCAATGATGTACTTAGTTCT
GTGGACCAAACAAATTCCCCATCAATAAGCCCAGAACAATGTGAGATTTT
GGCTGAGCGAGTGGAAGAAGTCTTCCTGTGTCACCTTTGCAAACACATTA
TGGAAATTCCCATTTCTAACACAAAGTGCTTCCATTCCTTTTGCCACAAA
TGTATTTTCCCCAAGATTATTGGATTTACGCTAGATGAAACATTATGCCC
GATTTGCAAGGCTAATTTGCACCCACAAAATGTCCACGTTTCCCTCGCCC
TCCAGCACTCGTTGAAATCAACCAAAGTACCTTGTACTAAATGTCAGACT
CCTTTTGCATTATTGGAGATTTTGAATCATGAAAGCAAGTGTCAATCAGT
CATCAAAATTTCGGACGTATTTGAGCTCAAATGTTTCCCAAGACATGTGG
AGGATGCCGCCCTACATGTTATCAAACAAAAAATGGACTCAGATAAAACC
GTGAAATTTGCAAGTGGTGGTCCTAGAGTAAGGCCTTTTTTCTTATCTTT
TTACACAAAATAAAATAGTGTATAATATGTATGTATCTAACTACTAGATT
GATCAAATAGCGTTCTTTAAATGACTTTATATATAAGACCTTTCCTGCAA
TTATCTAATCACTCATCTAAAAAAAATTAAGAAATGAACATCAGTCACTT
GACCTGTCTCAAACGTTTGCAAAAAATTAATTGATAAATGCCTCTTTCTC
ATAGCCTGTAACATTTACGAAGCTCACTCAAAATTACGTCCCTTCAGAGA
AGGCAAACAAGCGAACAGTGCAGAAAAGGAACAGAGAAATGATGGAAAAT
ATGAGTGTGGTTGCTGGGCCTTCCCAAAAGTCGATCAATTTCCAATCTGC
TAAACTTGTGAATTCGTTTACAGAGGCTGAACGCCAATCCATCTTAGAGC
ATGCTAACATTAGACCAGTCATAGAAGCAAGAAAGATGTTAGCAATGAGA
CTTCAATTTGGTTTATCATGGGGCATGTTACGTGGAGATTCAGGGTGAGA
TAATCAAATTAAATCTAGTTCCATAAGCTGATTGCAGAGTGATATANNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAATTTAATATTGGATCGATACAATGGTATACAATAAAAATT
TTGAATAAATTATCACAAGTATCTGTATATATTACACATTTACAGCTGGC
TAAGAAGTTTCAACATCAAACCAGAAAGCGAAGCAAAGCAACGTCAGACG
ATGAAACGAATCGAGAATGCTGTTGTCAAAGGAATCTTGGCACCATTCAC
CTTTCCATGTCAAGAAGAGAAAGGAAAGTTCATCGTGGGTTCTTCTGGCT
GGGCATTTATGGAAAATTTCAAGGAGCATTTGCTTGGTCGTTTAGACTCT
ATCATCAGGTGAGTTTAACGGGGTGTTGGTAATTCCAGTCCCATAATAGC
AAGGTAGATCTAAAACGAAAACAAAATGCTAAAATTAAAACAAAATGCTA
AAAATTAAAACAAAATGCTTAAAATTAAACACTTTTATTTTTTCAGGGCC
AAAATGTTGAAAAACCATACAGAGCCAATGGAACAAGAAATTCATCTCAA
AGTTGGAGGTGACCATGGTGGTGCTTCTTTCAAGTTTGCATACCAAATCG
CAAATCTACCAAAGCCTAACAGCATAAACAAGACAATTGTCATGAACACC
TTTGAGGCAAAGGACATCAGAAGCAATCTTGAAATAGCCACAATGCAATT
GTCAAAGGATGTCAATAGTTTGAACATGGCAAAGATTGGGTAAAATTGTT
TGATTAATACCAAAGTAAAATTAATTGACAACAGTTCTGCATGTGTGTGT
GTGATTAGGGAGAGGGGTCTAATGATGTAGCATATGCCCAAAAATACCTG
AATGATTTCAAATTAGCAAGGACAGCCAATCGATAAACACTTAAGCTACT
TGTCCAAACAAAAGTACTTAATAGTAACTTTTTTTAATCCAGGGATCGTT
GCATCAGAGTGTTTATGTGCGGTGACTACGAATACTTGTGCAAAATCTAT
GGTATTACAGGAGCAAGTGGTAAGTTGCAGGTGTTAAAATTCTTTGGAAG
AGAAAAATTTTTTTACCTTAATGCAGTCAGCAGATTATTATTAGGACCCA
TTTCTCTCTTCAGGACGACATCCATGTTTATTTTGCATTGCAACAAAAAA
AGAAATTCAACTTCCTCCAGATCAGCGTTCTTGTCAGCCACGAACTTTGG
AGCAAATGAAAAATGATCTTCAAGATTTCCGAAATGCAGGAAGTGACCTG
AAAAGAGCAAAGGAGTTCAATAATGTTATTGACGATCCCCTTTTCTTGAT
CCCAATCGACCAGGTAAATATCATTAAAAATAGATTTGGTAGATCTCCTC
ACCAAGAGTCAAAGTGGTAAACTCTTTTAACAATGCGTTAAGAAAATTCG
ATTACAGTTTACTACCTTAACACTTATATAACTAATCAAGTATTCAATGC
AGGAAAAATGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042988TCONS_00042988Clytia hemisphaericatranscript
TCONS_00042987TCONS_00042987Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042988-proteinTCONS_00042988-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003833supercontigsc0003833:5000..9011 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.65	0.53	0.62	0.72	2.21	1.63	1.55	1.29	0.82	1.12	0.77	0.91	0.74	0.6	1.02	1.14	1.8	1.32	1.29	1.04	2.68	2.98	0.96	1.02	0.14	0.12	1.08	0.8	1.23	0.49