TCONS_00042988 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042988
Unique NameTCONS_00042988
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2384

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042988 ID=TCONS_00042988|Name=TCONS_00042988|organism=Clytia hemisphaerica|type=transcript|length=2384bp
TTCTTCCTGGAGGAGAGAAATTTCGACATAAACAACACTCCCCCCTTCAT
GTGCCTGACCTGTCATGCCaaattaaaaaacatgaaaagggCTTCTTCAA
CTGCAAAACTAATTTTGCCTAAATGGGGCCCTCACCAACAAGAAAACTGC
ATCTGTAACCGAAGATTTAATTCTACTGAAATAGTTCCCCAATCGAAAGC
AGGCCGAACGCCAAAGAAAACAAGGAAGAACAAGGGTAGACCATCCCATA
CTTCTACCTCTATTTGGTCAAGAGGAATGGCCAATGATGTACTTAGTTCT
GTGGACCAAACAAATTCCCCATCAATAAGCCCAGAACAATGTGAGATTTT
GGCTGAGCGAGTGGAAGAAGTCTTCCTGTGTCACCTTTGCAAACACATTA
TGGAAATTCCCATTTCTAACACAAAGTGCTTCCATTCCTTTTGCCACAAA
TGTATTTTCCCCAAGATTATTGGATTTACGCTAGATGAAACATTATGCCC
GATTTGCAAGGCTAATTTGCACCCACAAAATGTCCACGTTTCCCTCGCCC
TCCAGCACTCGTTGAAATCAACCAAAGTACCTTGTACTAAATGTCAGACT
CCTTTTGCATTATTGGAGATTTTGAATCATGAAAGCAAGTGTCAATCAGT
CATCAAAATTTCGGACGTATTTGAGCTCAAATGTTTCCCAAGACATGTGG
AGGATGCCGCCCTACATGttatcaaacaaaaaatggacTCAGATAAAACC
GTGAAATTTGCAAGTGGTGGTCCTAGACCTGTAACATTTACGAAGCTCAC
TCAAAATTACGTCCCTTCAGAGAAGGCAAACAAGCGAACAGTGCAGAAAA
GGAACAGAGAAATGATGGAAAATATGAGTGTGGTTGCTGGGCCTTCCCAA
AAGTCGATCAATTTCCAATCTGCTAAACTTGTGAATTCGTTTACAGAGGC
TGAACGCCAATCCATCTTAGAGCATGCTAACATTAGACCAGTCATAGAAG
CAAGAAAGATGTTAGCAATGAGACTTCAATTTGGTTTATCATGGGGCATG
TTACGTGGAGATTCAGGCTGGCTAAGAAGTTTCAACATCAAACCAGAAAG
CGAAGCAAAGCAACGTCAGACGATGAAACGAATCGAGAATGCTGTTGTCA
AAGGAATCTTGGCACCATTCACCTTTCCATGTCAAGAAGAGAAAGGAAAG
TTCATCGTGGGTTCTTCTGGCTGGGCatttatggaaaatttcaaGGAGCA
TTTGCTTGGTCGTTTAGACTCTATCATCAGGTGAGTTTAACGGGGTGTTG
GTAATTCCAGTCCCATAATAGCAAGGTAGATCTAAAACGAaaacaaaatg
ctaaaattaaaacaaaatgctaaaaattaaaacaaaatgcttaaaattaa
acacttttattttttcagggccaaaatgttgaaaaaccATACAGAGCCAA
TGGAACAAGAAATTCATCTCAAAGTTGGAGGTGACCATGGTGGTGCTTCT
TTCAAGTTTGCATACCAAATCGCAAATCTACCAAAGCCTAACAGCATAAA
CAAGACAATTGTCATGAACACCTTTGAGGCAAAGGACATCAGAAGCAATC
TTGAAATAGCCACAATGCAATTGTCAAAGGATGTCAATAGTTTGAACATG
GCAAAGATTGGGTAAAATTGTTTGATTAATACCAAAGTAAAATTAATTGA
CAACAGTTCTGCATGTGTGTGTGTGATTAGGGAGAGGGGTCTAATGATGT
AGCATATGCCCAAAAATACCTGAATGATTTCAAATTAGCAAGGACAGCCA
ATCGATAAACACTTAAGCTACTTGTCCAAACAAAAGTACTTAATAGTAAC
TTTTTTTAATCCAGGGATCGTTGCATCAGAGTGTTTATGTGCGGTGACTA
CGAATACTTGTGCAAAATCTATGGTATTACAGGAGCAAGTGGTAAGTTGC
AGGTGTTAAAATTCTTTggaagagaaaaatttttttaccttaATGCAGTC
AGCAGATTATTATTAGGACCCATTTCTCTCTTCAGGACGACATCCATGTT
TATTTTGCAttgcaacaaaaaaagaaattcaacttCCTCCAGATCAGCGT
TCTTGTCAGCCACGAACTTTGGAGCAAATGAAAAATGATCTTCAAGATTT
CCGAAATGCAGGAAGTGACCTGAAAAGAGCAAAGGAGTTCAATAATGTTA
TTGACGATCCCCTTTTCTTGATCCCAATCGACCAGGTAAATATCATTAAA
AATAGATTTGGTAGATCTCCTCACCAAGAGTCAAAGTGGTAAACTCTTTT
AACAATGCGTTAAGAAAATTCGATTACAGTTTACTACCTTAACACTTATA
TAACTAATCAAGTATTCAATGCAGGAAAAATGAG
Run BLAST on NCBI

protein sequence of TCONS_00042988-protein

>TCONS_00042988-protein ID=TCONS_00042988-protein|Name=TCONS_00042988-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
FFLEERNFDINNTPPFMCLTCHAKLKNMKRASSTAKLILPKWGPHQQENC
ICNRRFNSTEIVPQSKAGRTPKKTRKNKGRPSHTSTSIWSRGMANDVLSS
VDQTNSPSISPEQCEILAERVEEVFLCHLCKHIMEIPISNTKCFHSFCHK
CIFPKIIGFTLDETLCPICKANLHPQNVHVSLALQHSLKSTKVPCTKCQT
PFALLEILNHESKCQSVIKISDVFELKCFPRHVEDAALHVIKQKMDSDKT
VKFASGGPRPVTFTKLTQNYVPSEKANKRTVQKRNREMMENMSVVAGPSQ
KSINFQSAKLVNSFTEAERQSILEHANIRPVIEARKMLAMRLQFGLSWGM
LRGDSGWLRSFNIKPESEAKQRQTMKRIENAVVKGILAPFTFPCQEEKGK
FIVGSSGWAFMENFKEHLLGRLDSIIR
Run BLAST on NCBI

transcript from alignment at sc0003833:5000..9011-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042988 ID=TCONS_00042988|Name=TCONS_00042988|organism=Clytia hemisphaerica|type=transcript|length=4012bp|location=Sequence derived from alignment at sc0003833:5000..9011- (Clytia hemisphaerica)
TTCTTCCTGGAGGAGAGAAATTTCGACATAAACAACACTCCCCCCTTCAT
GTGCCTGACCTGTCATGCCAAATTAAAAAACATGAAAAGGGCTTCTTCAA
CTGCAAAACTAATTTTGCCTAAATGGGGCCCTCACCAACAAGAAAACTGC
ATCTGTAACCGAAGATTTAATTCTACTGAAATAGTTCCCCAATCGAAAGC
AGGCCGAACGCCAAAGAAAACAAGGAAGAACAAGGGTAGACCATCCCATA
CTTCTACCTCTATTTGGTCAAGAGGAATGGCCAATGATGTACTTAGTTCT
GTGGACCAAACAAATTCCCCATCAATAAGCCCAGAACAATGTGAGATTTT
GGCTGAGCGAGTGGAAGAAGTCTTCCTGTGTCACCTTTGCAAACACATTA
TGGAAATTCCCATTTCTAACACAAAGTGCTTCCATTCCTTTTGCCACAAA
TGTATTTTCCCCAAGATTATTGGATTTACGCTAGATGAAACATTATGCCC
GATTTGCAAGGCTAATTTGCACCCACAAAATGTCCACGTTTCCCTCGCCC
TCCAGCACTCGTTGAAATCAACCAAAGTACCTTGTACTAAATGTCAGACT
CCTTTTGCATTATTGGAGATTTTGAATCATGAAAGCAAGTGTCAATCAGT
CATCAAAATTTCGGACGTATTTGAGCTCAAATGTTTCCCAAGACATGTGG
AGGATGCCGCCCTACATGTTATCAAACAAAAAATGGACTCAGATAAAACC
GTGAAATTTGCAAGTGGTGGTCCTAGAGTAAGGCCTTTTTTCTTATCTTT
TTACACAAAATAAAATAGTGTATAATATGTATGTATCTAACTACTAGATT
GATCAAATAGCGTTCTTTAAATGACTTTATATATAAGACCTTTCCTGCAA
TTATCTAATCACTCATCTAAAAAAAATTAAGAAATGAACATCAGTCACTT
GACCTGTCTCAAACGTTTGCAAAAAATTAATTGATAAATGCCTCTTTCTC
ATAGCCTGTAACATTTACGAAGCTCACTCAAAATTACGTCCCTTCAGAGA
AGGCAAACAAGCGAACAGTGCAGAAAAGGAACAGAGAAATGATGGAAAAT
ATGAGTGTGGTTGCTGGGCCTTCCCAAAAGTCGATCAATTTCCAATCTGC
TAAACTTGTGAATTCGTTTACAGAGGCTGAACGCCAATCCATCTTAGAGC
ATGCTAACATTAGACCAGTCATAGAAGCAAGAAAGATGTTAGCAATGAGA
CTTCAATTTGGTTTATCATGGGGCATGTTACGTGGAGATTCAGGGTGAGA
TAATCAAATTAAATCTAGTTCCATAAGCTGATTGCAGAGTGATATANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAATTTAATATTGGATCGATACAATGGTATACAATAAAAATT
TTGAATAAATTATCACAAGTATCTGTATATATTACACATTTACAGCTGGC
TAAGAAGTTTCAACATCAAACCAGAAAGCGAAGCAAAGCAACGTCAGACG
ATGAAACGAATCGAGAATGCTGTTGTCAAAGGAATCTTGGCACCATTCAC
CTTTCCATGTCAAGAAGAGAAAGGAAAGTTCATCGTGGGTTCTTCTGGCT
GGGCATTTATGGAAAATTTCAAGGAGCATTTGCTTGGTCGTTTAGACTCT
ATCATCAGGTGAGTTTAACGGGGTGTTGGTAATTCCAGTCCCATAATAGC
AAGGTAGATCTAAAACGAAAACAAAATGCTAAAATTAAAACAAAATGCTA
AAAATTAAAACAAAATGCTTAAAATTAAACACTTTTATTTTTTCAGGGCC
AAAATGTTGAAAAACCATACAGAGCCAATGGAACAAGAAATTCATCTCAA
AGTTGGAGGTGACCATGGTGGTGCTTCTTTCAAGTTTGCATACCAAATCG
CAAATCTACCAAAGCCTAACAGCATAAACAAGACAATTGTCATGAACACC
TTTGAGGCAAAGGACATCAGAAGCAATCTTGAAATAGCCACAATGCAATT
GTCAAAGGATGTCAATAGTTTGAACATGGCAAAGATTGGGTAAAATTGTT
TGATTAATACCAAAGTAAAATTAATTGACAACAGTTCTGCATGTGTGTGT
GTGATTAGGGAGAGGGGTCTAATGATGTAGCATATGCCCAAAAATACCTG
AATGATTTCAAATTAGCAAGGACAGCCAATCGATAAACACTTAAGCTACT
TGTCCAAACAAAAGTACTTAATAGTAACTTTTTTTAATCCAGGGATCGTT
GCATCAGAGTGTTTATGTGCGGTGACTACGAATACTTGTGCAAAATCTAT
GGTATTACAGGAGCAAGTGGTAAGTTGCAGGTGTTAAAATTCTTTGGAAG
AGAAAAATTTTTTTACCTTAATGCAGTCAGCAGATTATTATTAGGACCCA
TTTCTCTCTTCAGGACGACATCCATGTTTATTTTGCATTGCAACAAAAAA
AGAAATTCAACTTCCTCCAGATCAGCGTTCTTGTCAGCCACGAACTTTGG
AGCAAATGAAAAATGATCTTCAAGATTTCCGAAATGCAGGAAGTGACCTG
AAAAGAGCAAAGGAGTTCAATAATGTTATTGACGATCCCCTTTTCTTGAT
CCCAATCGACCAGGTAAATATCATTAAAAATAGATTTGGTAGATCTCCTC
ACCAAGAGTCAAAGTGGTAAACTCTTTTAACAATGCGTTAAGAAAATTCG
ATTACAGTTTACTACCTTAACACTTATATAACTAATCAAGTATTCAATGC
AGGAAAAATGAG

Coding sequence (CDS) from alignment at sc0003833:5000..9011-

>TCONS_00042988 ID=TCONS_00042988|Name=TCONS_00042988|organism=Clytia hemisphaerica|type=CDS|length=3852bp|location=Sequence derived from alignment at sc0003833:5000..9011- (Clytia hemisphaerica)
CTGGCTAAGAAGTTTCAACATCAAACCAGAAAGCGAAGCAAAGCAACGTC
AGACGATGAAACGAATCGAGAATGCTGTTGTCAAAGGAATCTTGGCACCA
TTCACCTTTCCATGTCAAGAAGAGAAAGGAAAGTTCATCGTGGGTTCTTC
TGGCTGGGCATTTATGGAAAATTTCAAGGAGCATTTGCTTGGTCGTTTAG
ACTCTATCATCAGGTGACCTGTAACATTTACGAAGCTCACTCAAAATTAC
GTCCCTTCAGAGAAGGCAAACAAGCGAACAGTGCAGAAAAGGAACAGAGA
AATGATGGAAAATATGAGTGTGGTTGCTGGGCCTTCCCAAAAGTCGATCA
ATTTCCAATCTGCTAAACTTGTGAATTCGTTTACAGAGGCTGAACGCCAA
TCCATCTTAGAGCATGCTAACATTAGACCAGTCATAGAAGCAAGAAAGAT
GTTAGCAATGAGACTTCAATTTGGTTTATCATGGGGCATGTTACGTGGAG
ATTCAGGTTCTTCCTGGAGGAGAGAAATTTCGACATAAACAACACTCCCC
CCTTCATGTGCCTGACCTGTCATGCCAAATTAAAAAACATGAAAAGGGCT
TCTTCAACTGCAAAACTAATTTTGCCTAAATGGGGCCCTCACCAACAAGA
AAACTGCATCTGTAACCGAAGATTTAATTCTACTGAAATAGTTCCCCAAT
CGAAAGCAGGCCGAACGCCAAAGAAAACAAGGAAGAACAAGGGTAGACCA
TCCCATACTTCTACCTCTATTTGGTCAAGAGGAATGGCCAATGATGTACT
TAGTTCTGTGGACCAAACAAATTCCCCATCAATAAGCCCAGAACAATGTG
AGATTTTGGCTGAGCGAGTGGAAGAAGTCTTCCTGTGTCACCTTTGCAAA
CACATTATGGAAATTCCCATTTCTAACACAAAGTGCTTCCATTCCTTTTG
CCACAAATGTATTTTCCCCAAGATTATTGGATTTACGCTAGATGAAACAT
TATGCCCGATTTGCAAGGCTAATTTGCACCCACAAAATGTCCACGTTTCC
CTCGCCCTCCAGCACTCGTTGAAATCAACCAAAGTACCTTGTACTAAATG
TCAGACTCCTTTTGCATTATTGGAGATTTTGAATCATGAAAGCAAGTGTC
AATCAGTCATCAAAATTTCGGACGTATTTGAGCTCAAATGTTTCCCAAGA
CATGTGGAGGATGCCGCCCTACATGTTATCAAACAAAAAATGGACTCAGA
TAAAACCGTGAAATTTGCAAGTGGTGGTCCTAGACTGGCTAAGAAGTTTC
AACATCAAACCAGAAAGCGAAGCAAAGCAACGTCAGACGATGAAACGAAT
CGAGAATGCTGTTGTCAAAGGAATCTTGGCACCATTCACCTTTCCATGTC
AAGAAGAGAAAGGAAAGTTCATCGTGGGTTCTTCTGGCTGGGCATTTATG
GAAAATTTCAAGGAGCATTTGCTTGGTCGTTTAGACTCTATCATCAGGTG
ACCTGTAACATTTACGAAGCTCACTCAAAATTACGTCCCTTCAGAGAAGG
CAAACAAGCGAACAGTGCAGAAAAGGAACAGAGAAATGATGGAAAATATG
AGTGTGGTTGCTGGGCCTTCCCAAAAGTCGATCAATTTCCAATCTGCTAA
ACTTGTGAATTCGTTTACAGAGGCTGAACGCCAATCCATCTTAGAGCATG
CTAACATTAGACCAGTCATAGAAGCAAGAAAGATGTTAGCAATGAGACTT
CAATTTGGTTTATCATGGGGCATGTTACGTGGAGATTCAGGTTCTTCCTG
GAGGAGAGAAATTTCGACATAAACAACACTCCCCCCTTCATGTGCCTGAC
CTGTCATGCCAAATTAAAAAACATGAAAAGGGCTTCTTCAACTGCAAAAC
TAATTTTGCCTAAATGGGGCCCTCACCAACAAGAAAACTGCATCTGTAAC
CGAAGATTTAATTCTACTGAAATAGTTCCCCAATCGAAAGCAGGCCGAAC
GCCAAAGAAAACAAGGAAGAACAAGGGTAGACCATCCCATACTTCTACCT
CTATTTGGTCAAGAGGAATGGCCAATGATGTACTTAGTTCTGTGGACCAA
ACAAATTCCCCATCAATAAGCCCAGAACAATGTGAGATTTTGGCTGAGCG
AGTGGAAGAAGTCTTCCTGTGTCACCTTTGCAAACACATTATGGAAATTC
CCATTTCTAACACAAAGTGCTTCCATTCCTTTTGCCACAAATGTATTTTC
CCCAAGATTATTGGATTTACGCTAGATGAAACATTATGCCCGATTTGCAA
GGCTAATTTGCACCCACAAAATGTCCACGTTTCCCTCGCCCTCCAGCACT
CGTTGAAATCAACCAAAGTACCTTGTACTAAATGTCAGACTCCTTTTGCA
TTATTGGAGATTTTGAATCATGAAAGCAAGTGTCAATCAGTCATCAAAAT
TTCGGACGTATTTGAGCTCAAATGTTTCCCAAGACATGTGGAGGATGCCG
CCCTACATGTTATCAAACAAAAAATGGACTCAGATAAAACCGTGAAATTT
GCAAGTGGTGGTCCTAGACTGGCTAAGAAGTTTCAACATCAAACCAGAAA
GCGAAGCAAAGCAACGTCAGACGATGAAACGAATCGAGAATGCTGTTGTC
AAAGGAATCTTGGCACCATTCACCTTTCCATGTCAAGAAGAGAAAGGAAA
GTTCATCGTGGGTTCTTCTGGCTGGGCATTTATGGAAAATTTCAAGGAGC
ATTTGCTTGGTCGTTTAGACTCTATCATCAGGTGACCTGTAACATTTACG
AAGCTCACTCAAAATTACGTCCCTTCAGAGAAGGCAAACAAGCGAACAGT
GCAGAAAAGGAACAGAGAAATGATGGAAAATATGAGTGTGGTTGCTGGGC
CTTCCCAAAAGTCGATCAATTTCCAATCTGCTAAACTTGTGAATTCGTTT
ACAGAGGCTGAACGCCAATCCATCTTAGAGCATGCTAACATTAGACCAGT
CATAGAAGCAAGAAAGATGTTAGCAATGAGACTTCAATTTGGTTTATCAT
GGGGCATGTTACGTGGAGATTCAGGTTCTTCCTGGAGGAGAGAAATTTCG
ACATAAACAACACTCCCCCCTTCATGTGCCTGACCTGTCATGCCAAATTA
AAAAACATGAAAAGGGCTTCTTCAACTGCAAAACTAATTTTGCCTAAATG
GGGCCCTCACCAACAAGAAAACTGCATCTGTAACCGAAGATTTAATTCTA
CTGAAATAGTTCCCCAATCGAAAGCAGGCCGAACGCCAAAGAAAACAAGG
AAGAACAAGGGTAGACCATCCCATACTTCTACCTCTATTTGGTCAAGAGG
AATGGCCAATGATGTACTTAGTTCTGTGGACCAAACAAATTCCCCATCAA
TAAGCCCAGAACAATGTGAGATTTTGGCTGAGCGAGTGGAAGAAGTCTTC
CTGTGTCACCTTTGCAAACACATTATGGAAATTCCCATTTCTAACACAAA
GTGCTTCCATTCCTTTTGCCACAAATGTATTTTCCCCAAGATTATTGGAT
TTACGCTAGATGAAACATTATGCCCGATTTGCAAGGCTAATTTGCACCCA
CAAAATGTCCACGTTTCCCTCGCCCTCCAGCACTCGTTGAAATCAACCAA
AGTACCTTGTACTAAATGTCAGACTCCTTTTGCATTATTGGAGATTTTGA
ATCATGAAAGCAAGTGTCAATCAGTCATCAAAATTTCGGACGTATTTGAG
CTCAAATGTTTCCCAAGACATGTGGAGGATGCCGCCCTACATGTTATCAA
ACAAAAAATGGACTCAGATAAAACCGTGAAATTTGCAAGTGGTGGTCCTA
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026740XLOC_026740Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042988-proteinTCONS_00042988-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042988-exon-sc0003833-1575043694:8235..9011TCONS_00042988-exon-sc0003833-1575043694:8235..9011Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1575043694:7718..8007TCONS_00042988-exon-sc0003833-1575043694:7718..8007Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1575043694:5000..6316TCONS_00042988-exon-sc0003833-1575043694:5000..6316Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1510915933:8235..9011TCONS_00042988-exon-sc0003833-1510915933:8235..9011Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1510915933:7718..8007TCONS_00042988-exon-sc0003833-1510915933:7718..8007Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1510915933:5000..6316TCONS_00042988-exon-sc0003833-1510915933:5000..6316Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1491911889:8235..9011TCONS_00042988-exon-sc0003833-1491911889:8235..9011Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1491911889:7718..8007TCONS_00042988-exon-sc0003833-1491911889:7718..8007Clytia hemisphaericaexon
TCONS_00042988-exon-sc0003833-1491911889:5000..6316TCONS_00042988-exon-sc0003833-1491911889:5000..6316Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003833supercontigsc0003833:5000..9011 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.0425918	0.0507631	0	0	0.294233	0.122114	0.0854592	0	0	0	0.436494	0.296984	0.404569	0.275748	0	0	0	0.120837	0	0	0	0.338064	0.184273	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042988 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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