TCONS_00042988-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042988-protein
Unique NameTCONS_00042988-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length427

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042988-protein ID=TCONS_00042988-protein|Name=TCONS_00042988-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
FFLEERNFDINNTPPFMCLTCHAKLKNMKRASSTAKLILPKWGPHQQENC
ICNRRFNSTEIVPQSKAGRTPKKTRKNKGRPSHTSTSIWSRGMANDVLSS
VDQTNSPSISPEQCEILAERVEEVFLCHLCKHIMEIPISNTKCFHSFCHK
CIFPKIIGFTLDETLCPICKANLHPQNVHVSLALQHSLKSTKVPCTKCQT
PFALLEILNHESKCQSVIKISDVFELKCFPRHVEDAALHVIKQKMDSDKT
VKFASGGPRPVTFTKLTQNYVPSEKANKRTVQKRNREMMENMSVVAGPSQ
KSINFQSAKLVNSFTEAERQSILEHANIRPVIEARKMLAMRLQFGLSWGM
LRGDSGWLRSFNIKPESEAKQRQTMKRIENAVVKGILAPFTFPCQEEKGK
FIVGSSGWAFMENFKEHLLGRLDSIIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026740XLOC_026740Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042988TCONS_00042988Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 117..194
e-value: 4.4E-7
score: 28.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..88
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 119..192
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 143..152
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 127..170
score: 10.719
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 127..173
e-value: 1.03188E-4
score: 38.5808

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042988-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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