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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000057_pilon:11114..14928+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043320 ID=XLOC_043320|Name=XLOC_043320|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3815bp|location=Sequence derived from alignment at sc0000057_pilon:11114..14928+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaatttctttttaaggtTCAAGTGTTTGTCAATGTGAAACAGCTCCTCC
TCAAAATGAGGCAGAGTCGACCCCTAAAGAAGAGAATGAAACACCTCAAC
AAAAAGTAAGAAGCATAAGTCATGATTGAAATCAAGTTATTTGtggtaaa
gaaaaatattttttacaaatgtCTGTCGTTAACATCACCTTAGCTTTCCT
CAATGATAAAGGTGATAATATCTCTATTTCCTTAGGGAACTATTGGTTTC
ATTGGGTTGGGTAACATGGGCCACCACATGGGAATGAATTTGATAAAGGA
TGGGTATAACCTTGTTGTCTATGATGTATATCCTGAAGCAATGAAGCCTT
TCAAAGAGCTTGGCTCCACAGCTGTCACTTCACCACGAATGGTAGCAGAA
CAAGTCACCAAAATAATAACTATGTTACCTTCAAGGTAAGAGGGAATTAT
TGATTATATTTTTACCAATCAATTTAAGCTTTGATGAAATAAGTAGTGAA
GGTTCTGAATGATATGGAAAGACTCGGTGTTTGGTTAGAGTtttaaagaa
acaaacaaacattctttattatttttttagccCTGATGTCTTTGAAGCAT
ATAATGGAGATCAAGGAATTTTGAGGTTTGTTACGTTTAACTTCTATCCA
ATTAAAGAGAATTGTCTAGACAAAATATTGAATTGCTATAAACAAAACAG
TCTGATCTGAGTACCTTTTCTGTTTTCGGACATTGATggtacagtgccgt
agcaactgggggctatgccccccccccccaataattttttcaaaaatggt
tattttgcaaaatgcaaagtttttcttttttattttgaaagcattttgtt
ttgagtgcattttcaagcaatctagagcttaaattttcaaaattcccccc
tcgggccaaaccatggttggccctcgcggtgtcactaaacttcagccccc
cccccaataagaaaatgcttcctatGTGGTATTTGAAAAGTTTAATCTAA
ACCATTAATGTTGATTTGCTCTTGAAAATTCAGTAATTTAACCATCATTT
ATAGAGGTATGCAGCCAGATACATTAATGATCGACAGTAGTACTATAGAC
CCATCGGCTTCCAAAGAAGTTGCGACAATAGCTGCCGATGCTGGCGGAAC
TTACATTGATGCACCTGTATCAGGAGGTAAGTAGCAGCTGCTTGAAACAT
CGTGGAAGACTTTCATTTTGATATGTAGATTTTAAGACTATCCTCTTAGA
CAGACCCAAAAGCCTTATTTGTTTTTTCTCTATCATTAGCTGTTTTGCAA
GAATCATTTTAAAAGATGGCTTATCTACGATTTGATTCAATccccccccA
GTGCACTGTACCACATGTATCAAATACACTATTAGAATCGAATCCATTTA
TCTAACATGAAAATGTACGAGCTATTGACACAAATTACCATCTAGATTTT
TACAATCTCTTTATGGTTTGGCCCGCTGCAACTGAAAATCTTGTTGTCGT
TTTTAACTTCTCTAGGAGTTGTTGCAGCACGTGACGGTGCGTTGACTTTC
ATGGTGGGTGCAAAACGAGAAGATTTTGAACAAGCGGAAATCCTACTCAC
CAGCATGGCCAAAAATGTTGTTCACTGTGGTGCTACAGGTACTGGACAGG
TATGCACAATAATTATACTAATACCTTAAACCTTTAATATTTCTGTTTTA
AGTcacattttggaattttcatCTCTTTTGGTTCTGTCACTTCTTGGGTA
GCAAGACCTCTATATTAGGTCTCAGGGGATGGCGTCCCTGCCCATTGCCA
GCcaaaaacaacagaaagtacagatcaacaacaaaacaaaacactttGGT
AGCATGGAATACACTTTGTTTAGTTCCACAGAGAGTGGCGCCTCTGCCAT
TTGTGAGCCACAACAACAGCAGCAACAtttcaacagcaacaacaaattTT
GGTAGCAAGAATTTAATCGATTCTCAGAGGTTGGCGACTCCGCCAGTAGC
aagccacccccccccccgtcaaaACGTTTGGTAGCACGAAATAAATTGTT
TCTCAGAGCTTGGCGACTCTGCCAAAAGTGAGCCGAATGTGACGACAAAA
AGACTGATCGACAACTCCACTTTTTACCACACGGGAATTTCTAAAGGTGG
ACATCATCACACATCATCATCATGAACATTTGGGATCAATGCAGTATTTA
TTGCGATCCTGGTTCAACAACTTTGACGAAAACGACGAAGACATTTGACT
gaagaagaagacaagaagaaagaagaagaaaaaaaattcgcaaTATAAAC
TGTCGAAGAATTCAATGCGAGTTCGAGTTTTATTGCTGGCTTGTGACAAT
GACTTTGCAGGAACCTCCCCCTCTCCCCTCCTGCCTAGTGTCACCAAGCT
GTATATTACAATATATTATTTGTAATATTTTAACCCCTGACAATTATGAC
TGAAACGACTGAATTTATAAGAATTatttatacattaaatttgacaGACT
TATGTTACTTTCTCCGCTGAGGTCTTTACAGGAGTCCCCCAACGTTTTGG
GTcaagctggagcttttacaaggttttcgatgattcggttgatggttgaa
tcttgagacaaaggattttattgctttttctaaagaacgcgtcatctcta
ttatttcaaatgaccaattagtgaagtatcttataaaaactccagctcat
cccaacgtttttcgtgatggcgtgaatggCGTTAtttcaagttcgtgatt
tcgtgatttaagattttaaagtacGTGATTGCGTGATTGTAGGAACTAAC
GTGTTCAACGCTCTTACAGGTTGAGAGAAGCATTTTCTAAGACAAACAAG
ATTTGCTAGTTTAATTAAGGCAGATATTTCTAAATCCTTGGCGacacgaa
aagtttttttccgtTGGTGCAattcaacatgctccatccccaccaacctg
aaacgctttcatGCGtctctccaccccatttttatTTCTACCAATGAAAG
TGGAATCGACAtcacttttaataacatttgtgcgtgtctgggacaaaatc
agcgtgtctattgggtatttccctcaatttttgtcccatgaaacaaaagc
AACCATGGGACAACGCAatcttttttcttgtgttggtgggatggagcatg
ttgcattgcaccaacgcgaaaaaaacttctcgtgtccccaagccttaagc
tCTCTTATACGAAACTAAATTATTCGACCCACTTATTTTCTTTATACAGG
CAGCAAAGATTTGCAACAACATGTTGCTTGCTGTTTCGATGATTGGGACT
GCTGAGGTGATGAACATGGGTACACGACTTGGTCTAGACAAGAAGATGTT
GGCGCACATTCTGAACATCAGTACAGGTCGATGTTGGTCCAGCGAACTAT
ATAATCCATGTCCTGGTGTTATAGAAGGTGTCCCATCCTCCAACGATTAT
CAAGGTGGCTTCGGTACTCAGCTCATGACTAAGGTATCTCCATGTTACAA
ATATGCACATCTGCGTAAAGAAATATCTGAAAGTATCAAAAAGTGGCTTC
AGTTTCATCCTTATAAAGCTCAGGGACTCCGAAACTACGTAAAACCTCTA
GATTCTGTATGCGCTGCTTTGGTCAATTGATTGCAATTTTctgattgttt
ttctctttattcCAGGATCTCGGATTAGCTCAAAACGCATCGACAGCTAC
CAAATCAGCAACGCCCATGGGTTCTCTTGCTCATCAAATCTATCGTGTGA
TGTGTAATAGTGGCTATGCTAAAATGGACTTCTCTTCTGTATACAAGTTC
TTAAGAGAAGACTCG Coding sequence (CDS) from alignment at sc0000057_pilon:11114..14928+ >XLOC_043320 ID=XLOC_043320|Name=XLOC_043320|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1980bp|location=Sequence derived from alignment at sc0000057_pilon:11114..14928+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaatttctttttaaggtTCAAGTGTTTGTCAATGTGAAACAGCTCCTCC
TCAAAATGAGGCAGAGTCGACCCCTAAAGAAGAGAATGAAACACCTCAAC
AAAAAaaaatttctttttaaggtTCAAGTGTTTGTCAATGTGAAACAGCT
CCTCCTCAAAATGAGGCAGAGTCGACCCCTAAAGAAGAGAATGAAACACC
TCAACAAAAAGGAACTATTGGTTTCATTGGGTTGGGTAACATGGGCCACC
ACATGGGAATGAATTTGATAAAGGATGGGTATAACCTTGTTGTCTATGAT
GTATATCCTGAAGCAATGAAGCCTTTCAAAGAGCTTGGCTCCACAGCTGT
CACTTCACCACGAATGGTAGCAGAACAAGTCACCAAAATAATAACTATGT
TACCTTCAAGGGAACTATTGGTTTCATTGGGTTGGGTAACATGGGCCACC
ACATGGGAATGAATTTGATAAAGGATGGGTATAACCTTGTTGTCTATGAT
GTATATCCTGAAGCAATGAAGCCTTTCAAAGAGCTTGGCTCCACAGCTGT
CACTTCACCACGAATGGTAGCAGAACAAGTCACCAAAATAATAACTATGT
TACCTTCAAGccCTGATGTCTTTGAAGCATATAATGGAGATCAAGGAATT
TTGAGccCTGATGTCTTTGAAGCATATAATGGAGATCAAGGAATTTTGAG
AGGTATGCAGCCAGATACATTAATGATCGACAGTAGTACTATAGACCCAT
CGGCTTCCAAAGAAGTTGCGACAATAGCTGCCGATGCTGGCGGAACTTAC
ATTGATGCACCTGTATCAGGAGAGGTATGCAGCCAGATACATTAATGATC
GACAGTAGTACTATAGACCCATCGGCTTCCAAAGAAGTTGCGACAATAGC
TGCCGATGCTGGCGGAACTTACATTGATGCACCTGTATCAGGAGGAGTTG
TTGCAGCACGTGACGGTGCGTTGACTTTCATGGTGGGTGCAAAACGAGAA
GATTTTGAACAAGCGGAAATCCTACTCACCAGCATGGCCAAAAATGTTGT
TCACTGTGGTGCTACAGGTACTGGACAGGAGTTGTTGCAGCACGTGACGG
TGCGTTGACTTTCATGGTGGGTGCAAAACGAGAAGATTTTGAACAAGCGG
AAATCCTACTCACCAGCATGGCCAAAAATGTTGTTCACTGTGGTGCTACA
GGTACTGGACAGGCAGCAAAGATTTGCAACAACATGTTGCTTGCTGTTTC
GATGATTGGGACTGCTGAGGTGATGAACATGGGTACACGACTTGGTCTAG
ACAAGAAGATGTTGGCGCACATTCTGAACATCAGTACAGGTCGATGTTGG
TCCAGCGAACTATATAATCCATGTCCTGGTGTTATAGAAGGTGTCCCATC
CTCCAACGATTATCAAGGTGGCTTCGGTACTCAGCTCATGACTAAGGCAG
CAAAGATTTGCAACAACATGTTGCTTGCTGTTTCGATGATTGGGACTGCT
GAGGTGATGAACATGGGTACACGACTTGGTCTAGACAAGAAGATGTTGGC
GCACATTCTGAACATCAGTACAGGTCGATGTTGGTCCAGCGAACTATATA
ATCCATGTCCTGGTGTTATAGAAGGTGTCCCATCCTCCAACGATTATCAA
GGTGGCTTCGGTACTCAGCTCATGACTAAGGATCTCGGATTAGCTCAAAA
CGCATCGACAGCTACCAAATCAGCAACGCCCATGGGTTCTCTTGCTCATC
AAATCTATCGTGTGATGTGTAATAGTGGCTATGCTAAAATGGACTTCTCT
TCTGTATACAAGTTCTTAAGAGAAGACTCGGATCTCGGATTAGCTCAAAA
CGCATCGACAGCTACCAAATCAGCAACGCCCATGGGTTCTCTTGCTCATC
AAATCTATCGTGTGATGTGTAATAGTGGCTATGCTAAAATGGACTTCTCT
TCTGTATACAAGTTCTTAAGAGAAGACTCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000057_pilon | genome | sc0000057_pilon:11114..14928 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 937-1086:3666 |
| Aaloc | 703-936:3250 |
| Aaloc | 571-702:1518 |
| Aaloc | 448-567:1056 |
| Aaloc | 403-444:582 |
| Aaloc | 202-399:236 |
| Aaloc | 97-201:1 |
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