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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:765441..772376+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033378 ID=XLOC_033378|Name=XLOC_033378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6936bp|location=Sequence derived from alignment at sc0000078_pilon:765441..772376+ (Clytia hemisphaerica_ch_hm2_pilon)
atGACAACGGCCGCTCGACCAACCTTTGATACGGCCCGTGGTGGTCAACA
ACGAGGTGAAGGGAATCTAGCATCACTTACTAAGCAATATTCTGCCAGAG
ATTTACCTTCgcatacaaaaatcaaaactaggTGAGAATGTTACACGTTT
ATTGTATAAGAGCATGTTCTCAACGTAGTCggaagaaatgttcttaaaat
gttcttattttcactgttttgtcagtatttttgtgcgatttccTGGTTTT
CTTCAGTCGATATTTGTGTATTAttataaattgtaaattttttctcatGT
CTCATTCCGacccttttgatttttctcttttatatACATGTTCTTATTAG
AACGTCTTAATTTGTGTCGAGCCTGAAAGTCctaatttttgacaaatttc
agtTTAAAATATCCATTTTCATTCGAATAATAGTGAACGACTTTACGTGA
AAATATTTCCTGTCCACTATTAAAATTATAAGTGCTATATCTTTGTGGAC
AGACTACATCCCAGTATTCGACTTTCTTTTCCATATTTATCACAGACAAA
TCGGACAAGATACAGCTGAAGAGATCCGTAGCCGTGATTTTAAACACGAT
TTGATGGAACGTGAACGTTCGTCACGTGAGAAAAGCAAGAAAGGTTCATC
CAATTCTAGTGATTATTCATCATCATCGAAACGACAACGATTGGATTACG
ATCGGCATTCTTCGCATCACCACAGTAGCGCGGCCATTGATGCCGATGAT
CCTGTTGATGATGAGGATGAGGATGACTCTGATGACGACAGGTTAGTTTT
TCACATCCCGGACAGGGACTCTAAACCTTTAAGCTTGGCCCTCACTTGTT
GAAAAAATCGCGTCTAATCACTAGACGTCTGCGTCTACCATTAGACGCGC
GTGACTAAGTGTTTGGAACCTCTAGTGAGTACACTCGTTAGACGCGGGCG
TCTAATGTTAGACGTGGGCGTTTAGTGTTAGACGCCTGGACTTTGACAAA
ATTTGTTAGACGCGTggaacaaaaaattttgttctGCGCGTCTAACGTTC
AAAGGCACCGCAATGTAAACATAATTAAATGTCCCCAAAGTTGTAAATTC
TCGTTAtcttttcgtatctttttcgtatttttttctctctgtttctgttt
ttacaaagtgtttttAGCTGATCAGTACTGCTGCTAATAAAATGCCAAGA
GCAAATAGGATCTTACTCTTTGATAGAAGAAGAAGAGCTTTGTGAAGCCC
ACAGGCAGTACCCCGTCATATATGATAAGACAAAAGTCGATCATAagaat
aatgtcattactgttATTGTTGGCTTTCTCCAGTGGCCAGAAACCTTAAT
GTTACAGAGAGACGTTCTCTAGCTGATATTGGCTGACGCATTCGAGTGGT
TTTCTTGCTGATACGATGTTGAATTAGTGAGAGAAGATGCTCAACGCGAG
ATCGAAAAAACATTCCACTGTCTTTTAGCAATGTTTGAAACAGAGTATTA
AACGTTCCATGGATTGGTCTTTCTTGAAAAATATCTCGTACCCAAAACCG
CCTGCGACGCGCCTTTCTCCTATTTTGtctttggcccagcgctagcgata
gggcctttcatttgcaactttccgtccgtgtccttccgctgtctgtccgt
ccgttttggtagaaacggcgcttcaacaccagtaccacacttttaaattt
taccgtctggagagggaaaagcttgctaaagttggatactggctataaaa
gatatattttctgattctgcgctccttcaaaacaattttcaaaacaaaac
aaaatggcggtcgaagcgaggaggttgattcatattttcttgaacatttt
ctttgctttagtggccaagagactttcaaaccaaagaaattttgtaatga
tttttctttataaacctttttcaacattctgccatatctttgctcaagtt
ttcataaagttttatgagtgaaaattctaccttaaatcactttcattttt
agtttcttgttttcttgttttcaaaaagactttatttttaggaaataatg
gcttttgatatagaaataaacaaactgaaatgcagctgtgtaaatttgaa
taagattggaactttttgcttgatgctacacaagaaaacagtcacttttg
gatctgtcgctgttaagTTACAGTCAGTGGTATGGTATGGTGGGACGtgg
tggtatgattttcaaactcaacacataattatttcaagtaaactgattct
ggaatctggtaatggacactaaaatggaccTCATATGTGTAAATTGTAAC
atgattggaactttttccatgatgctacgcgtgaaaatggttatttctgg
atctgtctcgtttgacgatttggtgcggtggcttgatttttcaaactcga
cacagaattatttcaaatatgctgattatggaatatgttaaatggagact
aaaatgtaGTGCATGTGTacatttgaacaagattgggacttttttcatga
ttctacacattaaataaaatggtcatttctggatctgtcgcattaaacgg
tcggtggcttgatttttcaaactcgaatcacataattatttaaagtatat
aattaatggacactaaaatgcagctcatgagtaaatttgaactagattga
aacatttttcatggttgcaacgcatgaacagtgaaaatggtcatttctgg
atctgtcacaAACTGTTCACTCACATTACGTtgcaaccatgaaaaatgtt
tcaatctagttcaaatttacccatgagctgcattttagtgaaATAAACta
catgaattttattagcctggatatgttgaccgtaaactatttcgctgtct
agttttttaaagattatttttctggtccaattaacatgcctgcagggata
tttctccctgtatatgtgagtgcacctaattcgttaaaaagcgcccactc
actaagcagaatattcgcaggatttttttatacttttctatgggcgcgca
taattGATGGGAAATActgaccttgtgaaaaaagataaacaaatgaaaat
gaaaacacaggttcatttctaaacaaaatggccgctggaaaggagccttt
ataaaATGTGGCtgttttgatgtactgtagttttaagtagttttcaaagt
tttttgagtttgtaaataaggttttatggtaagttatgtgtgtctgcctg
ggttttcaaagttttgatagtctgtcaacaagggttcactcgcAGGCAGt
ttcaaacaaactgtacccgatTTTTTCAGTtacaccagactctaaaattt
tagaaactttgtatgttcaggtaagatttttttttctgaaattttgagtc
tggatacccaggccaggctagaattttattggaatGTTGAATGTAGTTGA
AGACATTTTCGCGAGGGGGTCCGCTGCTAAGGCCTGGTAAAATGTTTTAT
TGGCCAAAGgctaaaaatgtgtaaaaaattgacgatttttgaaactccta
ctctcgggtacctaatagccgccccccctgCAAATTAAttcaggacattc
ttattccaacctccccccgcctattgatttttgcaaaaatgtttttgaaa
gttgccTCTTTTGTCCAAATTCTGCTgcattagcctccttttcaaaagtt
ttcacccaggacatttttattccagccccgtcccccgcttattccaaact
agactggcacgccagtcgggctggaacggtatcacgcgggaaaagtgagt
gtaggagttaggtaagcgtaggaagaaattttgtcggcggcaagggctGA
AAGCTGTTAATCAGCAGCCTCTCACCAGCTTTTGCTCGTTCTCCTACGCA
GCTCCTATTCTAGCAAACGCCCGCCGCCTTTATGTTCCCGCCCTCTGACA
TGATTAATTAACAGACTAGTTTGCTAGTCTAATTCCAAACCCTCCAGCTA
TTATAATAGGTAATTAGGTACCCGAGAGTATTCAACCGAGATCATTAAAT
AAAATTTCAAGCGTCTAACCAATGAGAAGTACCGCAGTGTATTGAAAAAA
AttttcctgtcttcactttgatctaTTTCAAcgggtcatacatttgctgt
tttgcacaggctcgttttcaacacgttacttttcgctgggccttcacgcc
caacgggcttcttgttttcgTAACAAAAGTATCAGGAGCAAATCTTCACA
ATTATCAAAGTAGCTTTCATCATCACTGCTATCCATCTTCTTTCCATCAC
ATAAGCTGAAAACAAGCTCAAACTCATAACTTCATTTATTCACATTTCCC
ATATTTTAAtcctttaattcaaaaaagttcatcGTAGTGAGGACAACAAA
GACATAATTTCTAGACGCACGCGCCTAAGGACTCGACGCGCGCGTCTAAT
GTTAGACGCAGGCGTCTAGTAATTAGACGCGATTTTTTCAACAAGTGAGG
ACCAAGCTTTAAAGTTAATGTTAGGGTAAAAGGGgcaattccagaaaaaa
atttacgcCTTATGTTGAGGACtttttttGTGAAAGGTGATcctcctgga
ttttttttttcaattttggatttttgactccttaactttttgactccttg
acgttttactgaccaccctggatttttgaccttATTTTCCTGACCACACT
GGATTTTCCACCTTTTCCACCTCAATTCGATTTTTACGCTCGATAAACCA
GACCCctggggggtactacccttgtcgaccgacgggggtgctccgctgag
gttcaaaaaatggaccctacgtgggactcgaaatttgcgaaaaaagtgac
ccagaatgggactgaaattccaaaatgttctactttttccccaaattttc
cagaaataggcaccttacgagggactgatttttctattttggtgtttttg
cgaccctacctgggactcgtggaggttaaaaaaggtaccctgaccagcgg
agcatccccgtaacccattttgccctagtacccccccccccccctccccc
cgggacCAGACCACTTACCTCCTCAACAAAGGGAATACGTAGACTATTTC
TTGAATAGCCCAATACACCTATCCACCCATATAAATTGGGTTTTAAAATC
CATTGTGAAGAAAAAGAAGCTTGACTAAGGAGAAGCAATAGCCAAAAAGT
TGAGAatcgaaaatattttagaaactGGGTTTTTACAGTAAATTATGact
atcaaatttcaaattctaaaGAATACGTTATAAAACTCGCGATATGCCGT
GACAGAGGCCCTGAAAACATCCAGAAAAACACCTGACTTTCTTTAGGAAC
CTTCCATAGAGGAGGGATGGCTTGATTTTACCAAAGTATTGGCACATGAC
TTCAAATCCTCttctttgtcatttttttggatAGTGACGATGATGACGAT
ACCGCAGAATTGTTGGCAGAATTGCAACGCATCAAGCGAGATCGTGCTGA
AGAAATGCTCAAACAAGTAAGTTAAAGGACATCATTTATCGTAACTctta
ccatttgcttacactgTATTTTTTAAACAGAAGATAGAACCTCGTTTTGA
ATTCAACCGATCGTTGGGATGGGCTTTAGTTCAGGCCATAAACAatcatt
tcaaagatttttcacttcattttttcaGGAGCAAGAAAAACGAACAGAAG
ATGAACGCATTCGAACGGAGAATCTGATATCGGGCAACCCTCTACTGAAC
CAAAACCAACAACAAGAAGGAGACTTCAAAGTCACCAGAAGGTAAGAGGA
ACCTTCACATTTTAAGGGGTTTCTcaggggttttgctttgtttttggtag
gctgGCGATAGTCTAACTCTAGTTTCTAAGCCGACGAATTCTTAGCAATC
ACAGTGTATTGATTGgcgtaaatatgtacttgaggcggcgAACCGAACTT
TTTGAATAacgaattgtaattttttttgtgactTGTACCGGCAAAATTCG
CCGTTCGCCgggcctaaataagacccctTGCTTCTCATAGAGAGGTTGCG
TAACTTTAACAAAATATGAAACACTTTATATTATATCCAGGTGTTCTTTA
TCGGACGGATTCGATTCGGGACTGATGTGATgtgatgtgttttttttctt
ctcaggTGGGACGATGACGTAGTCTTCAAAAATTGTGCGAAAGATGACGA
CAAACCAAAGGTTTGAaccaataaattatttttttatgtttgttacattt
tgttttttCCGGCCCCTTCATCCACTCCGTAGGTTTTTTCCAATGCGCAA
ATTTCGTGTTTGGTTACGCACGTATGTTATTGTACAATTTGAGAACCGCA
AATTCTGTTTAGCTCAATTTCACGAAAAAAGACTTTTGCACCAACTATAC
TAGCCAAACCAACGGTGATACGTTCGTTGTCTTCGAACAAAAGACTCTGA
CACAATTCTCTCTTGTGAATTTTCCTATCCTAGTGAGAAAGTGACCATTA
AGTGACAATTAACAGCCTCAAGCGAATTtcaattttcgacaaaaaagaGT
ATCCTGATCAACGGCACTTGCTTAACCCCTTCTCTTTCTTCCTGGGTTTc
aaacattgagtttaaagtccgaagggctagagagaatctttaaccttttt
gAAGCAAGAACAAGATTTGTCATGTTTTTGACATAgcgctttttttttct
ttttttttcacgcaGCATATTTTTATAAAGTCTGGCGATGGATTTCAATC
CGGAGtttgtgaaaaccacgcggatCAAGCGTTTcagatgggaaataaat
ggcttcatttcctaTCAAAGAGTTTCaactctagccccttcggggtttta
aactcaatgttttTGACGCCTTCGTGTTATGTTATATATGTCGTTTCTCT
GTTTTTTCTCTTAGAATTCTGGATTCATCAACGACACGATTCGCTCGGAG
TTTCACAAAAAGTTCATGGACAAATACATCAAATAG Coding sequence (CDS) from alignment at sc0000078_pilon:765441..772376+ >XLOC_033378 ID=XLOC_033378|Name=XLOC_033378|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1398bp|location=Sequence derived from alignment at sc0000078_pilon:765441..772376+ (Clytia hemisphaerica_ch_hm2_pilon)
atGACAACGGCCGCTCGACCAACCTTTGATACGGCCCGTGGTGGTCAACA
ACGAGGTGAAGGGAATCTAGCATCACTTACTAAGCAATATTCTGCCAGAG
ATTTACCTTCgcatacaaaaatcaaaactagatGACAACGGCCGCTCGAC
CAACCTTTGATACGGCCCGTGGTGGTCAACAACGAGGTGAAGGGAATCTA
GCATCACTTACTAAGCAATATTCTGCCAGAGATTTACCTTCgcatacaaa
aatcaaaactagACAAATCGGACAAGATACAGCTGAAGAGATCCGTAGCC
GTGATTTTAAACACGATTTGATGGAACGTGAACGTTCGTCACGTGAGAAA
AGCAAGAAAGGTTCATCCAATTCTAGTGATTATTCATCATCATCGAAACG
ACAACGATTGGATTACGATCGGCATTCTTCGCATCACCACAGTAGCGCGG
CCATTGATGCCGATGATCCTGTTGATGATGAGGATGAGGATGACTCTGAT
GACGACAGACAAATCGGACAAGATACAGCTGAAGAGATCCGTAGCCGTGA
TTTTAAACACGATTTGATGGAACGTGAACGTTCGTCACGTGAGAAAAGCA
AGAAAGGTTCATCCAATTCTAGTGATTATTCATCATCATCGAAACGACAA
CGATTGGATTACGATCGGCATTCTTCGCATCACCACAGTAGCGCGGCCAT
TGATGCCGATGATCCTGTTGATGATGAGGATGAGGATGACTCTGATGACG
ACAGTGACGATGATGACGATACCGCAGAATTGTTGGCAGAATTGCAACGC
ATCAAGCGAGATCGTGCTGAAGAAATGCTCAAACAATGACGATGATGACG
ATACCGCAGAATTGTTGGCAGAATTGCAACGCATCAAGCGAGATCGTGCT
GAAGAAATGCTCAAACAAGAGCAAGAAAAACGAACAGAAGATGAACGCAT
TCGAACGGAGAATCTGATATCGGGCAACCCTCTACTGAACCAAAACCAAC
AACAAGAAGGAGACTTCAAAGTCACCAGAAGGAGCAAGAAAAACGAACAG
AAGATGAACGCATTCGAACGGAGAATCTGATATCGGGCAACCCTCTACTG
AACCAAAACCAACAACAAGAAGGAGACTTCAAAGTCACCAGAAGgTGGGA
CGATGACGTAGTCTTCAAAAATTGTGCGAAAGATGACGACAAACCAAAGg
TGGGACGATGACGTAGTCTTCAAAAATTGTGCGAAAGATGACGACAAACC
AAAGAATTCTGGATTCATCAACGACACGATTCGCTCGGAGTTTCACAAAA
AGTTCATGGACAAATACATCAAATAGAATTCTGGATTCATCAACGACACG
ATTCGCTCGGAGTTTCACAAAAAGTTCATGGACAAATACATCAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:765441..772376 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 628-699:6865 |
| Aaloc | 574-627:6107 |
| Aaloc | 460-570:5629 |
| Aaloc | 379-459:5386 |
| Aaloc | 133-375:547 |
| Aaloc | 1-129:1 |
|
