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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:691143..698001+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033374 ID=XLOC_033374|Name=XLOC_033374|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6859bp|location=Sequence derived from alignment at sc0000078_pilon:691143..698001+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAACATTACACGTAGGAGATGAGATCAAAGAAATTAACGGCATAAATAC
ATCAATGTGTTCTGTTGAACGTCTACAACAGATCTTGGTAAGATTTTGAA
ACTTATTTTGTGTTTAAAGACTGTTTTACTCCCCTTCTCCCTAGCAGCTG
CGTTTTTCAAAGTTCAACAAAAGTCAGTTGTTATGGAATGTTGATTTTCG
TTATAGTCTCCGACGGTAATCAGAGGGAGGTGACCCGAAGGCTTCTCTTT
CGAAAATTATCTACCCGAAGGGTGCCACTCCTTCTTCCTAATTTCCTCCA
CTTAGCCTTGATCCTTCTCCTTCCTTGTAAATTTAATCACTTATCATCAA
GCAAAGGGGCATTTTTACAAAGTACGACGTCTTTGGGCAGCGATTGAATT
GAACCCCTAGGattgacgcaaaaaaaaaatagttatgATTAGTTCTACAA
TAACGCGCAATATTTTTAGGACGGCTGAAGAAAGTTATATTTTAGATTGC
AATTTTCTTGTCGTGTGAGTTAAACCTTTGCCTAATATTATATCAATgct
ttacttttgttttctacAGCGAGATGCGTCAGGAGATGTGACATTCAAAA
TAgtccctggttgtcaaaatgaaGATCGTGCCAGCAAAGAGGTAAAGGAG
ATTTACCTTTTAATGATGGGTGGTTCAttaaaaaagtcttttgaacTGAA
TCtattaaatatattttctttgttgTAATCTTGTGAAAAGCGCACGACGT
ATGATTTTCCATCAAATACCTTAAATTAGGAAagcttttctaaaactttt
CTTGTATCATTATACGCCGGTAACCTTTATTCGTATTCTATaagaacttc
aaaaaactttgagttttaagccgaaacatgttcttaagattttacgAGTA
CTTttatgcaatttcttaagaaattgggagTCTTAGAGCCCGccaatttt
cttaacttgttctcaatattttggaCATCTTAGTCTTATGTTCttaagta
tatatttttttgtataaaaaaatgtattttaaaaaTGCTTACTGCTGTTA
CTTCAATGTAGGTctattttaaatgtttatatGATTATGACCCACGTGCA
GATGATATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGA
CGTTTTAGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGTATCCT
CTTTGCTTTTTTCTTGCATTCAATGTTAATTAAATAAacattattatcca
tatagcggtcattaagtaagccattaaagattcgaacggcgggcggtatt
gaaaggttctatgactcaaatagtcatacccgtgctgagaaaactaaggc
gtcgcgcttcagagggctgaaatatcattaacagCCCTGTTTATAGGGcg
ataatagcgagtttatgtatgtgtgtttttcagcgacggagacggtaagg
ttctaatttgagtagatcctgaccagctgaggacgacggtaaatcagcac
ttttaccgtcctcgattttgcggggcggaatttcgggtttttccaaatcg
cttctaccgtcctcaaaagtgcaaatacataaactcggtaatgtcatttg
cggcccgctcggaactttattgaagtccttgcattgaagcgaaaagacta
aactaacgtcagaaaaaaataaccttttggtcatttgcggcccgctcgca
agggtactcaaaacttgttaaagtcattgcattgaagcgaaaagactggC
TGGcgctagaaaaaaaactttatttgaatctccgatatggataataatag
taatagcgttaagctttcgttcgttgttgtcattaattctgcccttgcag
tttgattattagccctctagtgccatttcccaaatgacactctcgggcta
ataatcaaactgcgcgggcagaaaataacaacaacgacctcaaactgaac
gctattgttataataaacgcccccttctcatagacccactggcacccctc
ccactggaaaaattggccagaatattgtccccggtggaaagtttttcttc
aagttcttgtccccgctgaaaaaagtcaaataaaccaatcctcgcagcaa
aatattatgccatttttcccatccccacttgaaaacaaaagaattcaaat
tcCCAGCGCATaaaaaaaCGTTGGAATACAAACCCCCATCgggtttcagt
ccgttatttttatccccactggttgaaacaatcctaccgggtctgtgtaG
AGTGGGTATATAAATGACCTTTAGTAATTTGATAAAAGGATTGAAGTGGG
ATTTAATATAACTGAAGTGTATTATGAACtgtaatatttcaatatttcaa
tatttcttttgttcCAAAACCGTTGGAATTAACGAAGATTACATTCCTGT
AACACTAACAAgtgtaaaaatattgatatcTTTTATTGCAGGCAAGGAAA
GTTGGTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACA
GTATGTTTGTTgtgtcttttgtttttttataacgttttttGACATTGAAC
AAATCCAACTAACTTTTGCATATAGCCGAGTTAATCTCTTAACAGATCGT
CCAATTCTGCGAATGCCACGCTCTGCTTTAAAAGGGATATGGCAAATGTG
ATGATCTGACATGGTCGTTCAGACAAAACATAACAAACCGCGttgctttt
tgcttgaaaacgaaagtgaaagcaaCTGGGTTTTAATGTTTATGATTTGC
TTTGGTTTTTTGTGCAATcgttttgctttagccaatcagcGCGCTTGAAA
GCTTATTTAATATTCATtccaaatctggatgaaaaagatcaaagcggtgT
GCAGATTCTCAGAAACAAGGCCTCCAAAGTAAATACGTGTCATACGtgga
gtatcagaatctgctcggataTAAAGTAATGTAAAACCGAATTCTCATAC
TATTTTTCATTATTAGACGTATTCGCAAGATGGTCATTGAAAGAAACAAA
GGAGAAGGAGGTAATGGACAGAATACAGCTCTTTGGTTTTCGGAATCAGC
TACTACTTCAGcagactctctctctaattgaACTTAAGGAGAGATTGTTG
AATAGTCAAGCCGCCAGCGCCTGAAACAAAGGATTCCTGGCTCGTATCCC
CGCTCTCTCTATTTATAATTGTCAGTCAAGTTTATTAGCCGTAGTCcctg
tgaaaacaatcgaaagacttcTTGTATCTTGAAGTCCAAGATTACTGAGC
TATCTACgttaaatatcgactctataTCTATCtaacttcttttattcaaa
cCTTTCTGTGCTGCAGTTTTTGGGTGATATAAAAAGGGGAAGGTGTTGCT
CAGTGTAGCTGTTGCAATTATCAATTTAGACAggttaccattttgaattt
tgaacccCAGCGGTGCACATTGCCTTCAATCAATCCCGAAGGTCAGCACA
CCCTTACGAGTAAATAACTTAATAGCTGTGTCATTTTCGTTTCATAGTTC
ACTATAAAAGTCTCAATATATCTATCCTTTCTTTCTAGCTATTACATGTT
TATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCGCT
AGGCTTAATACAGGTTTGTAGTTTTTAAATctgatttctttaaaatttga
tcaattaCTTAAGTTCATTAACCTTTAAAATTTTACGTCAGTGAGGTTAT
GTATTTGGCACTGTTGGGAACGGTggagtgactgaaacgatttAAACAAC
CTGCAGTTCTGAACTGCAAAATCGAGGActgtaaaagtgctgatttaccg
tcacCCTCAGTCAAAGAGGATCTGGAGAAATAAGAAGTCTCCGTCACTGA
AAACACGTATACATAAACTCACCTTTGGTAAGACCATGACATTAGATATT
CTTAACGTTGTCCTATTCATTTTGCAGCATTCGATAGATTGAACTTGGTC
ACTTACGAAGAAGTTatacaacaaaagaaaacataccATAAGACCATAGT
TCTCATCGGTAAGTACAATGGAGGAGGCCCTCCCCCCAAGCGGTTGTCTG
TGATGGCGTAATTAGGCTTTTTCCGTCGCGATGGCGTGATTAATGATCTA
ATTTACTTTACGAGGATCTCTTAAAGGAGATCTAATCTTAGAATCTGTGC
AATTGCATGCTATTTGCTCATGCTATTTgctcaaaagaagaaaatagtta
taatttgtttttatgaaaaacgtTAGAGTATTAAATTTTCAATCCTTCGA
CAATTCTTTTACTCGAGCAAAAAGGGGAGCACACAGTCACATACTCAAAC
AAGAACACATAAGAAAAAGGTTGTCGAATAACGTGTATTTTTATATCTAT
TTTATAGGTGCGCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGT
ATCGCGCTTCCCTGAAAAATATGCTTCACCAGTACCACGTGAGTAACACA
CACCCTTTCCCACTCTTTTTCATTGTTGTTGTCTTGTCCAAATTATATCT
CAGTTTGCAAAAGAGTGCTCAACCACATTAAAAGTTGATTACTGCAATGT
AGAAAAAATTATCATGTACTAAAAACACGAATCTTATGGAATAGGGTAAT
AGACCCATAGATCTGtaaaggccgctacccactcagcattttatggtcgt
cgaacaaggcgcacggcttaattattgcataaattacataatTCAAGCCT
TCAAAGGCGTTCGTTTTGAGCgcaacaagagttgaaactttttaactttt
ttcgcgAAGCTGAACGTGTGCAAAAGATGTGTATCATgtgcaaaaagatg
ataaacacaaaagaagagagaaaaacatGTGCTGCAGAGTGGAATGAGAA
AAGCGTACAGCGACCAAAGCGCCCGAGCCGTGCGTCTTGTTCGCCGAACA
TAAAATGCTGAGTCGGTAGCGGCcttaaaacccgaagggctgGATGTCAG
GTTTTAAGCCCTCgtaggaaaaaaaattgaatattggaaaaaattttgtt
gccattgtttttgaaagcccgtgaagcttctgattggtcaagcgctgaaa
ttcgattgtaatatcacgtgacttaggtaggatttcctacctagccTCAG
CACACTTTTCAGTAAAAGCCCGACATCTAGTCCTTCGGGTTTTACAAATC
tatgaatagaccttttcataaattacgttatgAATAGCACTTGCCATGGT
GCCATAGTGATTAActtccattggattttaataaaactactttctattca
taaaaaaatcatttaatctcTCAAAAGACATAACCACCATGGTAATCGTT
TGAATACgagacaagtgatgttcgtgacgtaacttatgaaaaggtctatt
ggtcgTTATCTCTTGGGAATTTAAACGACCATTTTCGTTCATTTTCTAGA
TACGTCACGCCGGCAGTCACCCAATGAAAAGCATGGTGAATTATGGTTCT
TTGAGACTGAAGACCGTATGTTGAAAGATATCGGAAGTCATCAATACTTA
GAATACGGAAAACATGACGGTCATTTGTATGGAACCAAATTATCTTCTGT
TCAAGACCTCATTAAAAATGATCGGACACCAGTCTTAGATATCGAAACAC
CAGTGAGTATGAATCATTAACCATACCCCTGTCtatcacagccccggtgg
aatttttttttgtcagtggggataaaaattcctatttaaatcccaatggg
gatagaaattgcTTTGTTCCAAGgataaaaaattcagtggcgatggtttt
gaagtgcaatttttgcCACTCACCGCAGCTCACCGCATCAATTCACTTGA
GTtacaagccgaaggctagagagGGATCTTTAAGTTGAAAATTGTCTTTT
CATCCCCTTCTTAGGCATTAAAGATTTTACGTTGCAAGGAGTTCTTTCCA
TACATCATATTTGTTTCGTCTCCAATCTCATACCCTGAAAGCGGTGATCC
AAAGATGGTAAGTACAATAGCCAAACCTCTCACTTCGATCAATAGCTAAA
AAAGAGCTACTTCAAAGCAGCTGTGAACCTTTTAATTTTAAACAGatacg
aaaaatatcaaaagcacggatttgaaatcagcgagttcgaatattttttg
aatcagaagaaaaaatcttctttttttcatctgcatttttctccttattt
tttcaacgttttgaaaaaaaaacctttatttttttcaaggtttctCAGAA
GAAGTCATCCCTTAAGATTTCTGCTGCATttcaaatgacagattgaatcc
aGCACTTCTATGCTTTCTCATTTCCCATTTTTTGAATAATGGCGGTAAAT
TTTACTCCCAATATCCAgtgtttttgtatgaaaaacaGGCTGGTCGTGAT
GTAGGAAAAAATTGACCCTAAATCCTACAGAAAATTCTATCCTAACCTTC
GGCTGTTCCTTTATGGTCAATACTTTAAAGGTGTTGTTTTTAAAtgagag
tgatatcgtttgcttactcgtcaattttaattcacaagctttttcacatt
ggattgccacggatgtggagcaagactgatatgaaatgggaacactttta
tttaaaaataaaacctttaaggtgATTCAATATAAATctggctgctggca
tccactagcagattcgtgctccttatacacGGTTTTGTGAAGGTCTCCAA
TTCAGACTAAcgtaaatcattttcttttatagGATGCTAGTCTACAACGC
CTCATTGCAGATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGA
TTATACTGTCATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCG
ATCATCTAGAAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGG
TATTATTGA Coding sequence (CDS) from alignment at sc0000078_pilon:691143..698001+ >XLOC_033374 ID=XLOC_033374|Name=XLOC_033374|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2208bp|location=Sequence derived from alignment at sc0000078_pilon:691143..698001+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAACATTACACGTAGGAGATGAGATCAAAGAAATTAACGGCATAAATAC
ATCAATGTGTTCTGTTGAACGTCTACAACAGATCTTGGGAACATTACACG
TAGGAGATGAGATCAAAGAAATTAACGGCATAAATACATCAATGTGTTCT
GTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGATGTGACATT
CAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCAAAGAGCGAG
ATGCGTCAGGAGATGTGACATTCAAAATAgtccctggttgtcaaaatgaa
GATCGTGCCAGCAAAGAGGTctattttaaatgtttatatGATTATGACCC
ACGTGCAGATGATATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAAT
GTGGTGACGTTTTAGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAG
GTctattttaaatgtttatatGATTATGACCCACGTGCAGATGATATGAT
ACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTTAGAAG
TTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTGGTACT
AAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAGCAAGGAAA
GTTGGTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACA
ACGTATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGACGTAT
TCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATGTT
TATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCGCT
AGGCTTAATACAGCTATTACATGTTTATGGCCtaaaaaaaccaacaaaaa
atcTAAAGTCAATCGTTACACCGCTAGGCTTAATACAGCATTCGATAGAT
TGAACTTGGTCACTTACGAAGAAGTTatacaacaaaagaaaacataccAT
AAGACCATAGTTCTCATCGCATTCGATAGATTGAACTTGGTCACTTACGA
AGAAGTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCG
GTGCGCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGC
TTCCCTGAAAAATATGCTTCACCAGTACCACGTGCGCATGGGGTCGGTCG
ACGACACATCAAGAATTCTTTAGTATCGCGCTTCCCTGAAAAATATGCTT
CACCAGTACCACATACGTCACGCCGGCAGTCACCCAATGAAAAGCATGGT
GAATTATGGTTCTTTGAGACTGAAGACCGTATGTTGAAAGATATCGGAAG
TCATCAATACTTAGAATACGGAAAACATGACGGTCATTTGTATGGAACCA
AATTATCTTCTGTTCAAGACCTCATTAAAAATGATCGGACACCAGTCTTA
GATATCGAAACACCAATACGTCACGCCGGCAGTCACCCAATGAAAAGCAT
GGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTTGAAAGATATCGG
AAGTCATCAATACTTAGAATACGGAAAACATGACGGTCATTTGTATGGAA
CCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGATCGGACACCAGTC
TTAGATATCGAAACACCAGCATTAAAGATTTTACGTTGCAAGGAGTTCTT
TCCATACATCATATTTGTTTCGTCTCCAATCTCATACCCTGAAAGCGGTG
ATCCAAAGATGGCATTAAAGATTTTACGTTGCAAGGAGTTCTTTCCATAC
ATCATATTTGTTTCGTCTCCAATCTCATACCCTGAAAGCGGTGATCCAAA
GATGGATGCTAGTCTACAACGCCTCATTGCAGATTCGACCGACCTCAAAA
ATCGATATCAACATTTTTTCGATTATACTGTCATTAATGAAACAATTGAC
GAGACGGTCGAAAAAATAGTCGATCATCTAGAAGAACTAGCTGGTTCTTC
TGCATGGATACCTGCGTCTTGGTATTATTGAGATGCTAGTCTACAACGCC
TCATTGCAGATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGAT
TATACTGTCATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGA
TCATCTAGAAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGT
ATTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:691143..698001 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1594-1770:6683 |
| Aaloc | 1501-1593:5865 |
| Aaloc | 1300-1500:5402 |
| Aaloc | 1219-1296:4360 |
| Aaloc | 1138-1215:3930 |
| Aaloc | 1063-1134:3541 |
| Aaloc | 1018-1059:2968 |
| Aaloc | 958-1014:2442 |
| Aaloc | 826-957:1062 |
| Aaloc | 754-825:570 |
| Aaloc | 667-753:1 |
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