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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:105955..108543- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032986 ID=XLOC_032986|Name=XLOC_032986|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2589bp|location=Sequence derived from alignment at sc0000078_pilon:105955..108543- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAGAATTGTGCTGCTTGTCGTATTTCTTGTCATTGCTTCTGGTAA
GTTCATACAACCTTTGTAATTATTTGACATTTTCAACGGATACGATCTAA
TAAATCATTCTCTATCCTAGGCATCTGACGAGTAGACGTTTTTTTATAAG
AACAATTTTATAAAAACAAGATGCTGAAAATCGATCAAAATCTTGAACCT
TAGAACAAATTAAGAACAATCTGGCAATCCTTTAATATATAATTGAACAC
GTTTAGGTTTCTTTTGGTATAAGTTTTACCTTTCACGAAAATTAATTTCT
TATTTTGAAGCTTATGAGTTGGGAAAACATAAGTTCGAATCTTCAAGATT
ATTATTTTTTGGCTTAATTCTTTAGATATACAAGGAAGAGTACAAGAAAA
ACGTATTATCCATGGAACCGAGGCTAAACCAGGTGCATGGCCTTGGGTCG
TCTTACTGCAAATAAAATCACAAGGCAAAACAAGTAACTGTGGTGGCACT
ATTTTGTCCAAGACTTGGGTATGTCGTAAGCTTAAAAATTCTAATTATAA
AACCCAAAAAATTATGGTTTGAAATTATTACACTTACATTCCCGGAAAAA
GGTTGTAGACTTTTCAAAAATACAGGAAAAATTTCAAAATAAGCTCTGAA
AACCCATTTTTACCAGGGCCAATGTTGTATTTATTGGATTTGGAGGGTTG
GGTGACAAGTCCAGAAGCCAAATCCACTCGACATCGAAGGAAATGCCATT
CGTGTGCCTGAAGTTCACCCATTTTCAAGTATTTGGAAGTCTGAATATCA
CAAGGACTAAAGCCATAGGGATTGCTAGCAAGCCTGTATGTGTCTTCTGC
CAAATAACCACTTGTGGTTCATTTGGGGAATGTCCAAAGTGTTAAAAGGG
CTTTTTTTTGGCACTATTGAGTAATTTTTGAAAAGTCTACAGACCTTTTG
TCCGGGATTGTAGAAATTGGCACATAATGAGAGTTATCGTTGAACCTAGT
TTTAATTGGTGGGGGAAAGAGACGACCTAGTCAAGGAACCAATGCCTTCA
TCTATAATTAACTTAACACTGCTTTTTCTCTTTTGGAATTTATGAATTTT
GTATATGAATTTTAGAAAATTTCTGTATACTTTCTTGAAACTTTAAACTT
CGCCAATTTTGAATATGAATTCAGAATTTTCGTACCCAGACGGCACACGA
CGTCAAAACAACGTCCATTTGACATTCATAACGTCCAAATAACGTTATTT
GAACGTTAAAACGACATTGTGTGCCAGTTGGGTATCTTCCTGGAAATATA
AGTTACAGCCAAAATCAAAATTTTTTCATAGATAATGACAGCCGCTCATT
GCTTTAAAAGTAAACCTGCTGCTTCAGATATCCTGGTAGCCGGTGCACAA
AATATCAAAGTTCATGAAGAGTCACAACAAAGAATTACGGCTAAAAGATA
TGTTGTGAACCCAGGATATAATCCCCCCGCTAAAGAAGCAGACATTGCTT
TGATCGAACTATCGACTCCCTTGAAATTCAATAAACGAGTTGAACAAGCT
CGTATTCAAGCAAAAGACGAGTATCCAAGTCTGGAAAAGACTTGTTTTAT
CGCTGGTAAGGCCTTGGTATTTAGGTTATTTTAAGACCAACATTTTAACT
TTTCCCATTGTCCATTGAGGCTGAGTTAAAGTCAGAATTTTACTTTGTCA
GACGATTGAGAAAAAGTTTGATTCACTAGATATAAATTGGCATTATATTA
TGGCTCACTCTCGAATTTCTCCTGAAAAGTACGCAATAACTACAATTGAC
GCTCTCGATTTCGATTTTCAAGGAGAATTAGATTTTCATCGAATAAGCAA
GCGTATCGAATGTTTATAAGAGTTTTTTGTTCACGGTGACTTTCAATATT
ATCGAATGATAGAGCGCATCGAATAGTAGAACGTCGGAAACAATCAAAAA
CAAATCGTAAAAATTTTACTTACGCGCTTAAAAAAAAGAAAGAAAGAATC
GTGTTTTTATTCTTACGGTATATTCTAAGGTTAGGATCCAACCCAGCCTA
AATCTAGCATGTGATGCATACCTCGAGTAAAGATTGGGCATTTATTTGAA
AACTTTTAGCGTTACTGGGGTATGATTGGCAATTTACAGGTAAGATGCTC
TAAAAATTGGCATTCTTAGTTTCAGTTGGCAAATTCCGTGGTATTCTTAG
CATATTCTTAATTTTTGCCCAATTTCATCATAAATATTCTTATAAAGTAT
ATTCTTTTTTGGATAGGCTGGGGTCGAACCAGCGTTGATCCAATTGTTAG
ACCTGACACCTTACAAGAAGCACAACTCCCAATCCTTCCAGAACGTTTAG
CCTTTGAAGAATTTATCTATGCAGGATTTAAGGACGGTGACACGAAACCT
AACGCATGTTATGGTGATTCTGGTGGTCCATTGATGTGTAAAACAACCTT
TCTTAGAAGATGGGTTGTTCAAGGACCAATAAGTCATTCGAGTGTAGGAG
ATTGTATGTATGATACTGCAGTTATACCAGTGGCCAAGTATTTGAGCTGG
GTTAAACAATTCGTTAAAGATCTGAAGACTCAGAATTGA Coding sequence (CDS) from alignment at sc0000078_pilon:105955..108543- >XLOC_032986 ID=XLOC_032986|Name=XLOC_032986|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1572bp|location=Sequence derived from alignment at sc0000078_pilon:105955..108543- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCAGAATTGTGCTGCTTGTCGTATTTCTTGTCATTGCTTCTGATGG
TCAGAATTGTGCTGCTTGTCGTATTTCTTGTCATTGCTTCTGATATACAA
GGAAGAGTACAAGAAAAACGTATTATCCATGGAACCGAGGCTAAACCAGG
TGCATGGCCTTGGGTCGTCTTACTGCAAATAAAATCACAAGGCAAAACAA
GTAACTGTGGTGGCACTATTTTGTCCAAGACTTGGATATACAAGGAAGAG
TACAAGAAAAACGTATTATCCATGGAACCGAGGCTAAACCAGGTGCATGG
CCTTGGGTCGTCTTACTGCAAATAAAATCACAAGGCAAAACAAGTAACTG
TGGTGGCACTATTTTGTCCAAGACTTGGATAATGACAGCCGCTCATTGCT
TTAAAAGTAAACCTGCTGCTTCAGATATCCTGGTAGCCGGTGCACAAAAT
ATCAAAGTTCATGAAGAGTCACAACAAAGAATTACGGCTAAAAGATATGT
TGTGAACCCAGGATATAATCCCCCCGCTAAAGAAGCAGACATTGCTTTGA
TCGAACTATCGACTCCCTTGAAATTCAATAAACGAGTTGAACAAGCTCGT
ATTCAAGCAAAAGACGAGTATCCAAGTCTGGAAAAGACTTGTTTTATCGC
TGATAATGACAGCCGCTCATTGCTTTAAAAGTAAACCTGCTGCTTCAGAT
ATCCTGGTAGCCGGTGCACAAAATATCAAAGTTCATGAAGAGTCACAACA
AAGAATTACGGCTAAAAGATATGTTGTGAACCCAGGATATAATCCCCCCG
CTAAAGAAGCAGACATTGCTTTGATCGAACTATCGACTCCCTTGAAATTC
AATAAACGAGTTGAACAAGCTCGTATTCAAGCAAAAGACGAGTATCCAAG
TCTGGAAAAGACTTGTTTTATCGCTGGCTGGGGTCGAACCAGCGTTGATC
CAATTGTTAGACCTGACACCTTACAAGAAGCACAACTCCCAATCCTTCCA
GAACGTTTAGCCTTTGAAGAATTTATCTATGCAGGATTTAAGGACGGTGA
CACGAAACCTAACGCATGTTATGGTGATTCTGGTGGTCCATTGATGTGTA
AAACAACCTTTCTTAGAAGATGGGTTGTTCAAGGACCAATAAGTCATTCG
AGTGTAGGAGATTGTATGTATGATACTGCAGTTATACCAGTGGCCAAGTA
TTTGAGCTGGGTTAAACAATTCGTTAAAGATCTGAAGACTCAGAATTGAG
CTGGGGTCGAACCAGCGTTGATCCAATTGTTAGACCTGACACCTTACAAG
AAGCACAACTCCCAATCCTTCCAGAACGTTTAGCCTTTGAAGAATTTATC
TATGCAGGATTTAAGGACGGTGACACGAAACCTAACGCATGTTATGGTGA
TTCTGGTGGTCCATTGATGTGTAAAACAACCTTTCTTAGAAGATGGGTTG
TTCAAGGACCAATAAGTCATTCGAGTGTAGGAGATTGTATGTATGATACT
GCAGTTATACCAGTGGCCAAGTATTTGAGCTGGGTTAAACAATTCGTTAA
AGATCTGAAGACTCAGAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:105955..108543 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 469-789:322 |
| Aaloc | 247-465:1205 |
| Aaloc | 190-243:1259 |
| Aaloc | 49-189:2213 |
| Aaloc | 1-45:2590 |
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