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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000057_pilon:1021887..1024085+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031793 ID=XLOC_031793|Name=XLOC_031793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2199bp|location=Sequence derived from alignment at sc0000057_pilon:1021887..1024085+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGAGGTGCCATTATGAAGTTCTCGGCGTTCCACGTGATGCTGACGATGC
AGAAATCAAAAAGTCATACCGCAAAATGGCTTTGCGTTATCACCCGGATA
AAAATCCGGATAAAGTTGATGAATATACGGAGATATTTCGCGAGATACAA
GGCGCTTATGATGTTTTGAGTGACCGACAAGAACGAGCTTTCTACGATAA
ACATCGTGAAGCAATCTTACGTGGTGGTGATGAGTTTGTAGATGATTCGG
TAGATTTGATGCAATATTTCAACCCAGGATGTCACACCGGACATAATGAT
ACCCCGAACGGTTTTTACGCCGTCTACGGGAAGGTATTTACGATGGTAGC
CGAAGAGGAGGAACCGTATCTTGAAGGAGAATCGGCTGACGAATACGAGA
CACCGGATTTCGGTGACTCGAACAGTGACTATGAGACAGTTGTAGCTCCT
TTCTATTCGTATTGGTTGAGTTACTGCACCAAGAAATCTTTCGTGTGGAA
AGATAAATATGATATTCGTCAAGCTCCCAACCGACCTACGCAACGTTTAA
tggagaaagaaaataaaaagatacgCGATCAATTTAGACGTAAACGTAAC
GAAGAAGTACGCGCGTTGGTTCAGTACATACGTAAGCGTGACCGACGTGT
CAAAGCGTACCGCGAGCAAATGGAGGCTGCGAAACAAGAGAATAAACGGA
AAGCCGATCAGAAGCGAGCGGACGATATACGGAAGCGGAACGAAGCGCTT
GAGGATTACACAGAACAAGATTGGATGACAATGAATGATTCAGCTCTGGA
TAACATCGATTCACATTTTGACGACCAGTTTGGTGGCACTGGAGCCAATG
ACGGTGTCGGATCGACCGATGAAGGGTCCGCAGACGAGGATGTTGAAATG
GTAGACGAGTTTTATTGTATCGCTTGTGATAAAACGTTCAAGTCCGATAA
AGCGCTTTCTAATCACGAGAAATCTAAGAAACATAAAGAGAACATGGAAC
TGATTCGAACCGAAATGGAGAATGAGTTAGCTAACGAATTGCTGGCTCAG
CAAAATGATGATGACGATTTTGACGGTCCCGAAGATGcgcaaatcaaaga
tggcgaGGTTGAAGTGATGAAACGTATCGATTCGATGAATCTAACACCAA
ATGTTGTTCTCAGGAACGTTATTGACCATACTAGATCACCGAGTCCAAAG
AATAGTGTTATTCCTGAGGATTCCATTTTAAAGCATTCAACTGATTCTTT
GGAGTATACCAAGCAGCGAGGTATCCATCGAGAAGGATCGGCTAAGATGA
AGgataagaaatcaaagaaaaagagaaataataTGCCTTTGTATGACGAA
GAAGATGCGAAAGCTTGGGAGGCTGGGTTGGAGATTGAGGAAGGTTTACA
CCCTAGAGACTCATTGGCTCTACCCCGTCGTAAGAGCAAGAAAAAGGAGG
TCCGCGAGACCGCAGATCGGTTACGTCATATGGACGAAATGGTTCAAAAA
GGCATTCAAGCAACTCTTGGTGACTCACCGCTTTCTGATTCTTTGTGTGT
GCACCGTAAGAACCAATCGCAATCGGGGAAACGTAACAAGAGTTCGGGGA
AACAGTTATTCGAGATTGGCGGTGGTGATTCCGAATCGGATTCAGAGGAG
GAAAACTTATTCCGATCGGGAGATGAGAATccagaaaacgaaaaaaacag
CGAGGAAACAAAGGTAAACGAAAATGTCGATGATTCAACAGAAAAGTGTG
CTAAACTTGAAAATTCACCTGTCAAGGACTCTATACCTTACAAtatggaa
aaattggctaattCCCAACACCATTCTAAACAtcataaaaactttgagaa
aaaagCGGAACAGGTTCTTTCTGAAGTGAATGAAAacgaagaaggagaag
aagtaTCAGAAAATAACAATACTGAGGATGGTACCGTCTCGAAAAAACCT
GAGAACAAAAAGCCAGCACGTAGAaataagaacaataagaacaatagttc
taagaacaatcaacaacaacaacagcagcaacaatCTAATGAAACAGGAG
AAGAACATTTTGCTTGTGGTGTATGTCAATTTGAGTTCCCAACTCGAAAT
AAGTTATTCGCCCATATTAAGGCGGAAGGGCATGCCGCCCTGAAAGAACA
GAGTGCCCTTCCCGGGAACAAAAAGtctaaaaagaacaaaaagcgTTAG Coding sequence (CDS) from alignment at sc0000057_pilon:1021887..1024085+ >XLOC_031793 ID=XLOC_031793|Name=XLOC_031793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4398bp|location=Sequence derived from alignment at sc0000057_pilon:1021887..1024085+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGAGGTGCCATTATGAAGTTCTCGGCGTTCCACGTGATGCTGACGATGC
AGAAATCAAAAAGTCATACCGCAAAATGGCTTTGCGTTATCACCCGGATA
AAAATCCGGATAAAGTTGATGAATATACGGAGATATTTCGCGAGATACAA
GGCGCTTATGATGTTTTGAGTGACCGACAAGAACGAGCTTTCTACGATAA
ACATCGTGAAGCAATCTTACGTGGTGGTGATGAGTTTGTAGATGATTCGG
TAGATTTGATGCAATATTTCAACCCAGGATGTCACACCGGACATAATGAT
ACCCCGAACGGTTTTTACGCCGTCTACGGGAAGGTATTTACGATGGTAGC
CGAAGAGGAGGAACCGTATCTTGAAGGAGAATCGGCTGACGAATACGAGA
CACCGGATTTCGGTGACTCGAACAGTGACTATGAGACAGTTGTAGCTCCT
TTCTATTCGTATTGGTTGAGTTACTGCACCAAGAAATCTTTCGTGTGGAA
AGATAAATATGATATTCGTCAAGCTCCCAACCGACCTACGCAACGTTTAA
tggagaaagaaaataaaaagatacgCGATCAATTTAGACGTAAACGTAAC
GAAGAAGTACGCGCGTTGGTTCAGTACATACGTAAGCGTGACCGACGTGT
CAAAGCGTACCGCGAGCAAATGGAGGCTGCGAAACAAGAGAATAAACGGA
AAGCCGATCAGAAGCGAGCGGACGATATACGGAAGCGGAACGAAGCGCTT
GAGGATTACACAGAACAAGATTGGATGACAATGAATGATTCAGCTCTGGA
TAACATCGATTCACATTTTGACGACCAGTTTGGTGGCACTGGAGCCAATG
ACGGTGTCGGATCGACCGATGAAGGGTCCGCAGACGAGGATGTTGAAATG
GTAGACGAGTTTTATTGTATCGCTTGTGATAAAACGTTCAAGTCCGATAA
AGCGCTTTCTAATCACGAGAAATCTAAGAAACATAAAGAGAACATGGAAC
TGATTCGAACCGAAATGGAGAATGAGTTAGCTAACGAATTGCTGGCTCAG
CAAAATGATGATGACGATTTTGACGGTCCCGAAGATGcgcaaatcaaaga
tggcgaGGTTGAAGTGATGAAACGTATCGATTCGATGAATCTAACACCAA
ATGTTGTTCTCAGGAACGTTATTGACCATACTAGATCACCGAGTCCAAAG
AATAGTGTTATTCCTGAGGATTCCATTTTAAAGCATTCAACTGATTCTTT
GGAGTATACCAAGCAGCGAGGTATCCATCGAGAAGGATCGGCTAAGATGA
AGgataagaaatcaaagaaaaagagaaataataTGCCTTTGTATGACGAA
GAAGATGCGAAAGCTTGGGAGGCTGGGTTGGAGATTGAGGAAGGTTTACA
CCCTAGAGACTCATTGGCTCTACCCCGTCGTAAGAGCAAGAAAAAGGAGG
TCCGCGAGACCGCAGATCGGTTACGTCATATGGACGAAATGGTTCAAAAA
GGCATTCAAGCAACTCTTGGTGACTCACCGCTTTCTGATTCTTTGTGTGT
GCACCGTAAGAACCAATCGCAATCGGGGAAACGTAACAAGAGTTCGGGGA
AACAGTTATTCGAGATTGGCGGTGGTGATTCCGAATCGGATTCAGAGGAG
GAAAACTTATTCCGATCGGGAGATGAGAATccagaaaacgaaaaaaacag
CGAGGAAACAAAGGTAAACGAAAATGTCGATGATTCAACAGAAAAGTGTG
CTAAACTTGAAAATTCACCTGTCAAGGACTCTATACCTTACAAtatggaa
aaattggctaattCCCAACACCATTCTAAACAtcataaaaactttgagaa
aaaagCGGAACAGGTTCTTTCTGAAGTGAATGAAAacgaagaaggagaag
aagtaTCAGAAAATAACAATACTGAGGATGGTACCGTCTCGAAAAAACCT
GAGAACAAAAAGCCAGCACGTAGAaataagaacaataagaacaatagttc
taagaacaatcaacaacaacaacagcagcaacaatCTAATGAAACAGGAG
AAGAACATTTTGCTTGTGGTGTATGTCAATTTGAGTTCCCAACTCGAAAT
AAGTTATTCGCCCATATTAAGGCGGAAGGGCATGCCGCCCTGAAAGAACA
GAGTGCCCTTCCCGGGAACAAAAAGtctaaaaagaacaaaaagcgTTAGa
TGAGGTGCCATTATGAAGTTCTCGGCGTTCCACGTGATGCTGACGATGCA
GAAATCAAAAAGTCATACCGCAAAATGGCTTTGCGTTATCACCCGGATAA
AAATCCGGATAAAGTTGATGAATATACGGAGATATTTCGCGAGATACAAG
GCGCTTATGATGTTTTGAGTGACCGACAAGAACGAGCTTTCTACGATAAA
CATCGTGAAGCAATCTTACGTGGTGGTGATGAGTTTGTAGATGATTCGGT
AGATTTGATGCAATATTTCAACCCAGGATGTCACACCGGACATAATGATA
CCCCGAACGGTTTTTACGCCGTCTACGGGAAGGTATTTACGATGGTAGCC
GAAGAGGAGGAACCGTATCTTGAAGGAGAATCGGCTGACGAATACGAGAC
ACCGGATTTCGGTGACTCGAACAGTGACTATGAGACAGTTGTAGCTCCTT
TCTATTCGTATTGGTTGAGTTACTGCACCAAGAAATCTTTCGTGTGGAAA
GATAAATATGATATTCGTCAAGCTCCCAACCGACCTACGCAACGTTTAAt
ggagaaagaaaataaaaagatacgCGATCAATTTAGACGTAAACGTAACG
AAGAAGTACGCGCGTTGGTTCAGTACATACGTAAGCGTGACCGACGTGTC
AAAGCGTACCGCGAGCAAATGGAGGCTGCGAAACAAGAGAATAAACGGAA
AGCCGATCAGAAGCGAGCGGACGATATACGGAAGCGGAACGAAGCGCTTG
AGGATTACACAGAACAAGATTGGATGACAATGAATGATTCAGCTCTGGAT
AACATCGATTCACATTTTGACGACCAGTTTGGTGGCACTGGAGCCAATGA
CGGTGTCGGATCGACCGATGAAGGGTCCGCAGACGAGGATGTTGAAATGG
TAGACGAGTTTTATTGTATCGCTTGTGATAAAACGTTCAAGTCCGATAAA
GCGCTTTCTAATCACGAGAAATCTAAGAAACATAAAGAGAACATGGAACT
GATTCGAACCGAAATGGAGAATGAGTTAGCTAACGAATTGCTGGCTCAGC
AAAATGATGATGACGATTTTGACGGTCCCGAAGATGcgcaaatcaaagat
ggcgaGGTTGAAGTGATGAAACGTATCGATTCGATGAATCTAACACCAAA
TGTTGTTCTCAGGAACGTTATTGACCATACTAGATCACCGAGTCCAAAGA
ATAGTGTTATTCCTGAGGATTCCATTTTAAAGCATTCAACTGATTCTTTG
GAGTATACCAAGCAGCGAGGTATCCATCGAGAAGGATCGGCTAAGATGAA
GgataagaaatcaaagaaaaagagaaataataTGCCTTTGTATGACGAAG
AAGATGCGAAAGCTTGGGAGGCTGGGTTGGAGATTGAGGAAGGTTTACAC
CCTAGAGACTCATTGGCTCTACCCCGTCGTAAGAGCAAGAAAAAGGAGGT
CCGCGAGACCGCAGATCGGTTACGTCATATGGACGAAATGGTTCAAAAAG
GCATTCAAGCAACTCTTGGTGACTCACCGCTTTCTGATTCTTTGTGTGTG
CACCGTAAGAACCAATCGCAATCGGGGAAACGTAACAAGAGTTCGGGGAA
ACAGTTATTCGAGATTGGCGGTGGTGATTCCGAATCGGATTCAGAGGAGG
AAAACTTATTCCGATCGGGAGATGAGAATccagaaaacgaaaaaaacagC
GAGGAAACAAAGGTAAACGAAAATGTCGATGATTCAACAGAAAAGTGTGC
TAAACTTGAAAATTCACCTGTCAAGGACTCTATACCTTACAAtatggaaa
aattggctaattCCCAACACCATTCTAAACAtcataaaaactttgagaaa
aaagCGGAACAGGTTCTTTCTGAAGTGAATGAAAacgaagaaggagaaga
agtaTCAGAAAATAACAATACTGAGGATGGTACCGTCTCGAAAAAACCTG
AGAACAAAAAGCCAGCACGTAGAaataagaacaataagaacaatagttct
aagaacaatcaacaacaacaacagcagcaacaatCTAATGAAACAGGAGA
AGAACATTTTGCTTGTGGTGTATGTCAATTTGAGTTCCCAACTCGAAATA
AGTTATTCGCCCATATTAAGGCGGAAGGGCATGCCGCCCTGAAAGAACAG
AGTGCCCTTCCCGGGAACAAAAAGtctaaaaagaacaaaaagcgTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000057_pilon | genome | sc0000057_pilon:1021887..1024085 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2199:1 |
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