XLOC_020706 (mRNA) -

Overview
NameXLOC_020706
Unique NameXLOC_020706
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000057_pilon:1505228..1506121-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020706 ID=XLOC_020706|Name=XLOC_020706|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=894bp|location=Sequence derived from alignment at sc0000057_pilon:1505228..1506121- (Clytia hemisphaerica_ch_hm2_pilon)
TATCAATATAGAAAAGAGTTGTTTTTCAAAGAGATTATAATGGATGGCCA ACTTGGAAAAATTACATACTATGCTCTCAGAGTAGAATTTACTTTCAAGG GTAGTCCACATGATCATTGTTTGCTTTGGGCTAAAGATGTTCCAAAACTT GAAAATGGGAAAGAAAAGTATATTGAACACATAGATAGTGTTATTTCTGC TAATGTTCCTGAGAGAGAAGAAAGTCCTGAATTATGGAAGTTAGTCGCTA AATATCAAATACACTCCCATTCAAGAACGTGTAGTAAATATCGCAAAAAT GAATGCCGATTTCAATTTGGAAAACTTTTCTGCAAGCGTACTATTTTGTC TGAACCGCTTCCTGAAGAGTTACCTGAAACTGAAAAACATGATATTTTGG TTGCTAGAAATAATGTTATCCAAACTGTTCAAGAGTATATAGATACAAAT TTGCATCCTAAAAAGAGAAACATTTTGGATCCTGATAAGCCTGAGTATAT TGAAATTGGATCTATTGATACAATTTTGGATTCTTTAGGGTTAAATTATA AAACGTATGAATATTACTTATCAATCTCACCAGACAAAGATCAGCATTTG TTTCTAAAACGTGACCCATATTCTTGTTTTGTCAACAATTATTTTGCAGA AGGCCTCCTAGCATGGGAGGTCAACATCGATATTCAGCCAGTCTTTAATG CATACAAGGCAGTTACATACATGCGTGCCTATTTTTCAAAAAGTGAAGAT AAGTGTTCAACTGCAATGCAAGAAGCATTAAAACAGGCCAAAGATTCAAA TGACAGTCAGTTTGAGAAGAGAGAGAGAGTGAGAGAGAGAGTGAACCATC CTAGATCATTAGGAATTGGCCTAGAAAAATTAAATATTAAATAA

Coding sequence (CDS) from alignment at sc0000057_pilon:1505228..1506121-

>XLOC_020706 ID=XLOC_020706|Name=XLOC_020706|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000057_pilon:1505228..1506121- (Clytia hemisphaerica_ch_hm2_pilon)
TATCAATATAGAAAAGAGTTGTTTTTCAAAGAGATTATAATGGATGGCCA
ACTTGGAAAAATTACATACTATGCTCTCAGAGTAGAATTTACTTTCAAGG
GTAGTCCACATGATCATTGTTTGCTTTGGGCTAAAGATGTTCCAAAACTT
GAAAATGGGAAAGAAAAGTATATTGAACACATAGATAGTGTTATTTCTGC
TAATGTTCCTGAGAGAGAAGAAAGTCCTGAATTATGGAATATCAATATAG
AAAAGAGTTGTTTTTCAAAGAGATTATAATGGATGGCCAACTTGGAAAAA
TTACATACTATGCTCTCAGAGTAGAATTTACTTTCAAGGGTAGTCCACAT
GATCATTGTTTGCTTTGGGCTAAAGATGTTCCAAAACTTGAAAATGGGAA
AGAAAAGTATATTGAACACATAGATAGTGTTATTTCTGCTAATGTTCCTG
AGAGAGAAGAAAGTCCTGAATTATGGAAATCAATCTCACCAGACAAAGAT
CAGCATTTGTTTCTAAAACGTGACCCATATTCTTGTTTTGTCAACAATTA
TTTTGCAGAAGGCCTCCTAGCATGGGAGGTCAACATCGATATTCAGCCAG
TCTTTAATGCATACAAGGCAGTTACATACATGCGTGCCTATTTTTCAAAA
AGTGAAGATAAGTGTTCAACTGCAATGCAAGAAGCATTAAAACAGGCCAA
AGATTCAAATGACAGTCAGTTTGAGAAGAGAGAGAGAGTGAGAGAGAGAG
TGAACCATCCTAGATCATTAGGAATTGGCCTAGAAAAATTAAATATTAAA
TAAATCAATCTCACCAGACAAAGATCAGCATTTGTTTCTAAAACGTGACC
CATATTCTTGTTTTGTCAACAATTATTTTGCAGAAGGCCTCCTAGCATGG
GAGGTCAACATCGATATTCAGCCAGTCTTTAATGCATACAAGGCAGTTAC
ATACATGCGTGCCTATTTTTCAAAAAGTGAAGATAAGTGTTCAACTGCAA
TGCAAGAAGCATTAAAACAGGCCAAAGATTCAAATGACAGTCAGTTTGAG
AAGAGAGAGAGAGTGAGAGAGAGAGTGAACCATCCTAGATCATTAGGAAT
TGGCCTAGAAAAATTAAATATTAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_020706XLOC_020706-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000057_pilongenomesc0000057_pilon:1505228..1506121 -
Properties
Property NameValue
Aaloc241-564:325
Aaloc1-237:895