|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:294929..298902- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018055 ID=XLOC_018055|Name=XLOC_018055|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3974bp|location=Sequence derived from alignment at sc0000078_pilon:294929..298902- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAATAGCGTAAGAAGATTACGAATAATGTTTACTCGATTGTTTTATTT
TTCGCTATTTGTCATTTCGAACCAAACCCTCCACCAATTTAAAGACACCA
AAATTGAAGATATTGATCGTTTAAATGAAGTCAAAGATGTTCGCTGGTCC
CTTGACGATAGTCTGTTACTTAGCAACAAAGATGACAGCTTTAAGAACGA
GAATGACGCCATTGACAGTGGCGTTACAAATCGTCATAAAGTTTTAAACC
CTCACGAACAATATTTTCCTAAAGATTTCGATGAAAAAAGCGCAATGAAA
AAAGCGATGCTTGATTCGAATATTCAAGCGTGGCGTGATGTTGGTGAGTG
CCAACACGCAATGAACGTACTTCGCGAGATTATCAAATGTGATATGTCTG
TTTTATCATGGTCACTAACCTACGAAGCTGAAAAATGGGCTGTATTGTTA
GCATCACGCCTGACGGATAAAACTGTGAGTGATAAAGTGCATTTGAGTCG
ATCATACGGAGATATGGGACAATTGATTTATTACGCAGAGGGGCTCTTTC
AAGGACCTGGGTGTAACATGGCGATAACTGCTTGGTTAAGGTATAAATAC
AAGGAGTCTAGAGAAAAGTCCGTAGATGATCTTCATTAACTTTGAATTGA
TCATTGAACCTTTGTTCATTCGAAGGATTTTCGATTCTCAAAGCTTTTGA
ACCAGTAAAATTTAATGAGAAATTGAATGATAAATAGTATACAAACGACT
TAAAGTCTGTCTCAAAAGACACTTTTTTAACATTTTCTCAGCACCTACTC
GTGCTATTTTAAAAGTTACATGTACCGTTGGAAAGATATTTTGCTGGAAA
ATAATCTAAAAATCAAAGACTTTTGAAAAATTGAAAAATGAAGACGAAAT
TAAGTGCTCACATACTTTTGAGAAAGACTTTGAAAAGTATGAGAAATTAG
TTATCGGTGGGTTTTCAAATTCTAATGTTTAAAGTGCTTAAAATAAATAT
GTCTGGGGTTCTAAAAAAAACATAGTGTACTCTTGTTCAAATCAAAATGG
GGATGAAATTTTAGGGTATTTTTCCCTTTCGTTCTGTAGTATAACCTCTT
GCTTAAACACTCTTTTTTGTTAAGGCACGGTCTTGGTATAGAAACGATTG
ATTCTGTTGGTCATCTTTCGCCGTTGGAGCATGGAAAAGTCATCGGAGGT
ATTTACATATAAATCAATATTTGGAAAAATTCTTGGATGTTGGTCAAATT
GCATTTTATTGCGGGAAAAGTTTTCGCAATTTCGCAAATGCTGAGCCTTT
TCTAAATTCCCAATGGGACTTAATTTTTCAGATGACACCCGGGTACTCAA
AATCTGCGAAATTTAATCCCCGCGAAAATTTATCCCAATAAAGTAGTTGT
TTTTCATATTTTCATGCTTGGAACAATTTGAAATTTCTTTGAGATGTTTT
TTTCATAGGGATTTTTTTTAAGGTATGTGTACACCTTTTTTCCGATTTTT
TGTCAAAAAAAATTTTTTCAGTCAAAGTGGAAGAAAAGTTACTGGATTTC
ATTTTGGTAAAATCGCGATCTTAAAATCTTTTTTAGATCCAGAGTTATAA
CAATTTAAGTTTCAAAACAAAGTTCGTCTTATGATGGATTATTTACTCAA
ATAATTGTCTCTTTCGGAAACAACAAAGACAAAAGAGAGAATTCAGCTGA
TGTTTATTCTCACCTCTATTGAATAGTAATATTTTTGACACATTTCACTG
ATTACTCAAATTAACAGCAATCATCTCGTTAAAAAATTCAAATTGATGTA
GAAAAAAACGAAATTTTACCACACCATACTAGTTTTAACGAGGTTAAAGT
CACCCATAGCATTTAGCTATGAACTTAATTTTTTTTTTATATTTTCAGCA
AAGAATTGAACTAAAAAAATGTCTTAGGATTTCTTTTCTAATCGAGTTAA
AGCTTCACAATTTCAGGTTAAGTGGAAAAAACTCGAGAAATGAATGATTT
TTTTCCAAATTTTAACAATTTTTAAGTTTTCTCGAGTTAAAGTCGATCCA
AAAAAAAATCCTAAGACATTTTTTTGGTTCAATCTATTGGGAACATAGTA
TCGAAATTATTTTTTCAAATTTCAAAAGCTATGGGTGACTTTAACTTCTT
TGAAGTAGGTAAGGTTAAAATTCTTAAGATTTTAATTATATCCTGCCCAG
TTTTTTAAATTCAGCTGAAAATTTTGCCATTAGAAAGAGAATATTATTGG
CATTCAGAAAATATATACTTTTGATGTATAAAAATTTGTTGTTCTAAAGA
TATGATCAATTAAAGAGAATGTGTCAAGGAAGGTGAACACATACCTTAAG
GCTTTTGTAATCTTTCTGTTATTTCAGGGCATTTCAAACAGCTACTTTGG
CAAGGATCTCAAAGATTTGGTGCTGGAATATCGTACAACAATGTAACAAG
AAGTGGTTTTGTTGTCATGTTCTTCAAAGATTTGATCCAAGAACAATCCA
AAGTCAAAATCCCTACAGAACCTTTACGTAAGTATTTGCTTCGCTGTACC
TTCAAAATTCCACAAATTTGCACTCCCCCTCTTCGATCCTTCGACATGGC
AAAAAAAACTCGATAAGAATTTCGGGTTAGTTATTGTTCCAGAGGTACTA
TGGATATACTAGTCTGAATCGTAGACCTCTACAAAACCCCAGGTAGTATA
AGGAGCACGAATCCGTTAGTGGATGCCAGTAGCCTACGGGTATACACGTC
TTACAGCCCCAGTGGAACTTTTTTCTTCAGTGGGGTTAAAAATTCCTTTA
GAAATCCCAATTAGGATAGAATTTCTATTGTTTCAAGGTTTAAGAATCCA
GTGGTGATGGTTTTGGAGTGTAATTTTTAAACATTGAATTTCGAATGAAT
GGGATGAAATCAATTTCAATTTCCCAATAGGGCTGAGTTTCTACAGGGTA
TTTTCCCACCGGGGACGAAATTTTCGCCAAATTTTTCAGTGGGGCTGGGG
TCCCAACGGGTCTGTGACACAGGAATGTATGGATAGAGCTGGTAGTAACA
CTTCCCTTGGTCAGGACCACCGATCAGAAAGGATGTTTTAACTACTAAAT
CCTTTTTTTCTGTTACAGTCTATTATTATTTTTCGAAATTAACGATGTAC
TATTTCTTGGGGATGATACTTGCTCTAATGGCTGTGTGGGATAGGTCAAA
AGGTCCAACCAAGCAAAATGATTGGCTGCATAAATGATAATTTAAGTTCA
ACTTTTTAAGCTAAAAATCCAAAAATTCATTATTGGGTTTTTTAATTAAC
TTTGCAAGTGGGGATGAAGCTTCATTACAGCTTCTTGCCGGAGAGGAACC
CCACCTCATGAAGCTGATTTTTCAAGTGACTAACAAAATCATATTTCTCA
TAAGCTTTGGTAGCTTGCTAATTTAACAACTATATAGAATGTCCTCCCGT
ACACCACAAAGACTAATTATATTTCATTCCATTGGTTTTCAGAGATGACA
TTCTGGCAATTACAACTACCCGGCTATAGAAATGCACTTTTTCAACAAAA
CTCAATCGAAACAAACCTAGGATACACTCCATGTTACTCGAGAATGGCCC
AATGCGACGACTGGGCCAAAGAGGGCCAATGTCAGGTACCGGCGCTACAA
TATTTCATGCATAAAAACTGTTTTCGTAGTTGCACCAAATGCATTTTAGA
CAGGAACGAGCTGATAGACGGTGGTTGGTCTACATGGACACAGGTTTCCC
CCTGCTCTTATGTAGACCAACTTGACAGTTTTAAAGTCTTCTATAGATTT
TGTAACACACCACCTAAAATGTTCGGTGGGAAAACTTGTCCTGGACACCG
TGTTCGGCGTGTGCCTTGCAATATGTATGAACCAGGATCAAAGAGACGAG
GAAGTAGGGATTGTTCCGATAAAGATCCGGATTGTGAAAAACGGAAAATG
TATTGCGATCATCAAGAATATGGA Coding sequence (CDS) from alignment at sc0000078_pilon:294929..298902- >XLOC_018055 ID=XLOC_018055|Name=XLOC_018055|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000078_pilon:294929..298902- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAATAGCGTAAGAAGATTACGAATAATGTTTACTCGATTGTTTTATTT
TTCGCTATTTGTCATTTCGAACCAAACCCTCCACCAATTTAAAGACACCA
AAATTGAAGATATTGATCGTTTAAATGAAGTCAAAGATGTTCGCTGGTCC
CTTGACGATAGTCTGTTACTTAGCAACAAAGATGACAGCTTTAAGAACGA
GAATGACGCCATTGACAGTGGCGTTACAAATCGTCATAAAGTTTTAAACC
CTCACGAACAATATTTTCCTAAAGATTTCGATGAAAAAAGCGCAATGAAA
AAAGCGATGCTTGATTCGAATATTCAAGCGTGGCGTGATGTTGGTGAGTG
CCAACACGCAATGAACGTACTTCGCGAGATTATCAAATGTGATATGTCTG
TTTTATCATGGTCACTAACCTACGAAGCTGAAAAATGGGCTGTATTGTTA
GCATCACGCCTGACGGATAAAACTGTGAGTGATAAAGTGCATTTGAGTCG
ATCATACGGAGATATGGGACAATTGATTTATTACGCAGAGGGGCTCTTTC
AAGGACCTGGGTGTAACATGGCGATAACTGCTTGGTTAAGTTTAATAGCG
TAAGAAGATTACGAATAATGTTTACTCGATTGTTTTATTTTTCGCTATTT
GTCATTTCGAACCAAACCCTCCACCAATTTAAAGACACCAAAATTGAAGA
TATTGATCGTTTAAATGAAGTCAAAGATGTTCGCTGGTCCCTTGACGATA
GTCTGTTACTTAGCAACAAAGATGACAGCTTTAAGAACGAGAATGACGCC
ATTGACAGTGGCGTTACAAATCGTCATAAAGTTTTAAACCCTCACGAACA
ATATTTTCCTAAAGATTTCGATGAAAAAAGCGCAATGAAAAAAGCGATGC
TTGATTCGAATATTCAAGCGTGGCGTGATGTTGGTGAGTGCCAACACGCA
ATGAACGTACTTCGCGAGATTATCAAATGTGATATGTCTGTTTTATCATG
GTCACTAACCTACGAAGCTGAAAAATGGGCTGTATTGTTAGCATCACGCC
TGACGGATAAAACTGTGAGTGATAAAGTGCATTTGAGTCGATCATACGGA
GATATGGGACAATTGATTTATTACGCAGAGGGGCTCTTTCAAGGACCTGG
GTGTAACATGGCGATAACTGCTTGGTTAAGGCACGGTCTTGGTATAGAAA
CGATTGATTCTGTTGGTCATCTTTCGCCGTTGGAGCATGGAAAAGTCATC
GGAGGCACGGTCTTGGTATAGAAACGATTGATTCTGTTGGTCATCTTTCG
CCGTTGGAGCATGGAAAAGTCATCGGAGGGCATTTCAAACAGCTACTTTG
GCAAGGATCTCAAAGATTTGGTGCTGGAATATCGTACAACAATGTAACAA
GAAGTGGTTTTGTTGTCATGTTCTTCAAAGATTTGATCCAAGAACAATCC
AAAGTCAAAATCCCTACAGAACCTTTACGGCATTTCAAACAGCTACTTTG
GCAAGGATCTCAAAGATTTGGTGCTGGAATATCGTACAACAATGTAACAA
GAAGTGGTTTTGTTGTCATGTTCTTCAAAGATTTGATCCAAGAACAATCC
AAAGTCAAAATCCCTACAGAACCTTTACAGATGACATTCTGGCAATTACA
ACTACCCGGCTATAGAAATGCACTTTTTCAACAAAACTCAATCGAAACAA
ACCTAGGATACACTCCATGTTACTCGAGAATGGCCCAATGCGACGACTGG
GCCAAAGAGGGCCAATGTCAGGTACCGGCGCTACAATATTTCATGCATAA
AAACTGTTTTCGTAGTTGCACCAAATGCATTTTAGACAGGAACGAGCTGA
TAGACGGTGGTTGGTCTACATGGACACAGGTTTCCCCCTGCTCTTATGTA
GACCAACTTGACAGTTTTAAAGTCTTCTATAGATTTTGTAACACACCACC
TAAAATGTTCGGTGGGAAAACTTGTCCTGGACACCGTGTTCGGCGTGTGC
CTTGCAATATGTATGAACCAGGATCAAAGAGACGAGGAAGTAGGGATTGT
TCCGATAAAGATCCGGATTGTGAAAAACGGAAAATGTATTGCGATCATCA
AGAATATGGAAGATGACATTCTGGCAATTACAACTACCCGGCTATAGAAA
TGCACTTTTTCAACAAAACTCAATCGAAACAAACCTAGGATACACTCCAT
GTTACTCGAGAATGGCCCAATGCGACGACTGGGCCAAAGAGGGCCAATGT
CAGGTACCGGCGCTACAATATTTCATGCATAAAAACTGTTTTCGTAGTTG
CACCAAATGCATTTTAGACAGGAACGAGCTGATAGACGGTGGTTGGTCTA
CATGGACACAGGTTTCCCCCTGCTCTTATGTAGACCAACTTGACAGTTTT
AAAGTCTTCTATAGATTTTGTAACACACCACCTAAAATGTTCGGTGGGAA
AACTTGTCCTGGACACCGTGTTCGGCGTGTGCCTTGCAATATGTATGAAC
CAGGATCAAAGAGACGAGGAAGTAGGGATTGTTCCGATAAAGATCCGGAT
TGTGAAAAACGGAAAATGTATTGCGATCATCAAGAATATGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:294929..298902 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 811-1290:481 |
| Aaloc | 661-807:1596 |
| Aaloc | 586-657:2850 |
| Aaloc | 289-582:3681 |
| Aaloc | 1-288:3975 |
|
