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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000254_pilon:480050..483548- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002114 ID=XLOC_002114|Name=XLOC_002114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3499bp|location=Sequence derived from alignment at sc0000254_pilon:480050..483548- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGGGGCTCTCATTTTCACGCTGTTGGTCGTTAATTTGGTAACAAT
CAGCGCCAATTCGGCTTCTGCTACAATTGGTGTTGGGTGTGATGGGTGTC
AAGAAAGTGCGGACGAGATTTGTGCTTTCAAGAGTAAGTTTGAAGATATT
TTGTTATCGTTAATCACAGGGGAAACAATATAAAATTCCCAAGGGTTTTC
TGGATGAAAAAATACTTTTCGCGTGTGATTACAGCCAACTCCCCTTAATT
CGAACCTCTATCCCAGCAAGCACCCAACGTTATTTCAACGTTCATTTAAC
GTTACATGATGTTGTGAACGTTAGATAAACGTTGAAACAACGTTGTGTAT
CAGCTGGGATTGCTCGAACCTTTCTGTAATTTAAACTTCAGCTGGAAAGT
CATTCAAAATAACTCTTCGTAATTCGTAGAAAATTATCGAGACTGTCGAA
TTAGAGAGTTTTCAACTTATCATTCAGCCTACTGAAGGGGATAAGCTGAA
GTTTTTATAAGATACTTCACTAATTGGTCATTTGAAGTGATAGAGATGAG
GCGTTCTTTAGAAAAAGAACGAGATTGTTTTTATTTCATCTTAACGACCA
ACCAAATCACATAAGAGCTTGTAAAAACTCCATTCTGTCCCTACTGAAGA
GTGAATGGTAATTACTAACTTTTTCAATAACGGTTGAACATTCCCCTCTT
CTAGTCTTCGGTTTGAAACTGGTGGTTAGGTGTATTCGAATACTTTAGGC
GTACAAACTTTCGTGAGGACGAAAAATCGCGAAATTCACGACATTTACTT
TCGCGAATTTAACAGAAAAATATTTTTCGCGAGCATAAACTTTCAGAATA
AAAACCTACTGGTTTAAAATATTTCGCTCTCTCTTAGAGCAGCTTTTTTG
AATAACAAAGACGTTTAACAATTATATTTAGCGACGCTAGAACGGCATTA
CAATGACTTCTTCAGTTTTTGACGTCACGGAACATCTGGTACACTTTTTT
CGCGTATCCGTGGCAGTCTTTGTTGAGTTCCCTTCAACTCCAACAGTCGC
CTTCCGCCGCCGAAAAACAATCGCCAACAAAATCGTGCGAAATGATATCT
TGGAAAGACCACCACGTCAAAACACCACGAAACCGTGTGGTAAATGCAAG
CTATGCCCGAACATTGTCACCCAGTCGGAAATCACTCACAATGGTATCAC
TAAACGTGTAACCAATGAAGAACGTTGTGTATGCAGCCAGATGCAAGATC
CATGACAAGTTGTACGTTGGTCACACAGGAGAAGCCTTGTCAACGCGTTT
TTCAAAGCACCGCTACGACATTGGAAAGAGACCGAAAAATTCAGAGTTGG
CAGAACATTTCCATTGCGACCACTCCTTTGCTGATCTTGAGGTGATGATC
CTAGAAAGTGACTTTTCATCCTCCGCAGAAAGACAACGAGCCGAAGATAA
ATGGATGTGCAGACTCCAAACTCTGGCTCCATCAGGTCTCAACAAAGACT
GCCACGGATACGCGAAAGAAGTGTACCAGATGTTCCGTGACGTCAAAAAC
TGAAGAAGTCATTGTAATGCCGTTCTAGCGTCGTTAAATATAATTGTTAA
ACGTCTTTGTTATTCAAAAAAACTGAAGATGCTCTAAGAGAGAGCGAAAT
ATTTTAAACCAGTATGTTTTTATTCTGAGTTTTACTTCGTCCGCAATGCT
GAATTGAATTGAGCATAAACTTTCGCGATTCAAGACGTAAAATTGAGAAT
TTTCACATGAAAAAATGACTTAGAGAGACAAATACTTCTTGAATTGGCTT
GAAACATTTGTCCTTTGACTTATTAGTCTTTTAGCAGGCTAAAAAGTGCC
ATAAAAGTTACATTTTATTCAAAGTTCGAGGTTTTACAGATTTTCTATCT
TGTCAAGAATTTTTTGTGAGCATAAACTTTCGCGAATGGCCCTTCCTAGA
ATTTTTAAAGACATTTACTTTCGCGAAAAGGGCCAAAATTCGCGAAAATC
GCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTAGTTACACGCT
GATTCATCGTTTTTATTGCCATGTACATGTTTTATAAACTTGGTTACATT
CCAGGTACAAAAGCTCTCTTCACTGAATGCTGGGTAGAAAGGTACAAAAA
GTGTTGTGAAAGCGGAAGTCTGCACCGAACGGTAAGAGGTTGTACGAAGG
GGCAAATTGTTTCACTGCTATTTTTCACATCTTTGCCCCAAGTGCCACCA
GGTTCCAAATTGTTTCTACAAAATGTGTCTAAAAGTGGCAAAAGTGCTTA
CATTTTTTGCCACCTAATTCCAAATGATCGTTTGTGTCCTTTGTGTTAAA
AGTGGTAAATTCTCAATCTCCACCAAGCAAAAAACAAATTTGTTTTGTTT
CGCGCAGTTTGTGTGAAAAGTGGTAAACAAAATGGCTTTCGAATGCATAA
ATTTGATTTTAATTTTGCATTAATTTTCCGTCGCTATGTAACTAGAGAAT
AAATTTATTCAAAGATGGCAGAAGGCATAATTTATGTTGTAACGATTGAA
AATGTAATATAAAGACCTAGAATAAGGCTCTGTTGCCGTCGGAATTTTAC
CTAGAAGGACTACTGTTTCGGGCCCGTATTAGAAGGAACGTGGTCTCGTT
TTTACACATTGCCTGACACAAGTTAGCTGAATGAGCCACTTTTCACACTT
TTTAAAAATGTTTCAACATGATGGTGGCAGAAGTGGGAACAAGGGCAAAA
GTGGCAAAAGTGTAAGCGAAACAATTTGCCCCGAAATAAAATTAGCTTGA
CCAAAGCATGGTTACATTAATATGACTTTAATCAAATTTCTAATGGATAA
AAAAAATTCATGTACAATTAATCAACTCTGTCTATTTTGAACCTCTTCTA
TTCGAATCTTATTTTATAATTCGAACTAAAATATTTATTCTCTCAGTTGG
AAATTAATATAATTGTAATTCGAATCTTCCTCTGATTCGAAAAAAATTCT
TGGTCCATTGAAGATCGAATTAGAGAGAGCCAACTGTATGTGGATTCAGT
TTTAAAAAAAGTAAAGAAGAAAGGCGGGGCGTACGGGGTTCGCGAACGCC
GAAATACCGTCACTTTTTTATTGGATCAGCGACAACACCGACAGCGAAAA
TATCTAAAAATCCTTATTTTGTCGCTGCATAGCATGTTTGACAACAAAAC
AAAACCTTCACTTTTTTCTTAGAATACCGATAGACCGATGGTAAAAAACT
CTTATATATATCGTCACACCGTTAAACCCGTACGACTCCCCCTTTTTAAT
CTAGCGACATCTATTTTATACAATGTATTTACTGGGCATTGTTAGTTTGC
CTAAAGAAATTTGATCTTAAGATTTTCCTTTTTTTCATTAATAGGGAACA
AATTGTTACATGGTTGATAAACCATTGGAATTTACAATCTGTTACGATGA
AGAATGCTACAATGTTGAGTTTACCGTGAAAGAACAAGTATGTTACTAA Coding sequence (CDS) from alignment at sc0000254_pilon:480050..483548- >XLOC_002114 ID=XLOC_002114|Name=XLOC_002114|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=630bp|location=Sequence derived from alignment at sc0000254_pilon:480050..483548- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGGGGCTCTCATTTTCACGCTGTTGGTCGTTAATTTGGTAACAAT
CAGCGCCAATTCGGCTTCTGCTACAATTGGTGTTGGGTGTGATGGGTGTC
AAGAAAGTGCGGACGAGATTTGTGCTTTCAAGAATGAATGGGGCTCTCAT
TTTCACGCTGTTGGTCGTTAATTTGGTAACAATCAGCGCCAATTCGGCTT
CTGCTACAATTGGTGTTGGGTGTGATGGGTGTCAAGAAAGTGCGGACGAG
ATTTGTGCTTTCAAGAGTACAAAAGCTCTCTTCACTGAATGCTGGGTAGA
AAGGTACAAAAAGTGTTGTGAAAGCGGAAGTCTGCACCGAACGGTACAAA
AGCTCTCTTCACTGAATGCTGGGTAGAAAGGTACAAAAAGTGTTGTGAAA
GCGGAAGTCTGCACCGAACGGGAACAAATTGTTACATGGTTGATAAACCA
TTGGAATTTACAATCTGTTACGATGAAGAATGCTACAATGTTGAGTTTAC
CGTGAAAGAACAAGTATGTTACTAAGGAACAAATTGTTACATGGTTGATA
AACCATTGGAATTTACAATCTGTTACGATGAAGAATGCTACAATGTTGAG
TTTACCGTGAAAGAACAAGTATGTTACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254_pilon | genome | sc0000254_pilon:480050..483548 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 217-321:106 |
| Aaloc | 142-216:1394 |
| Aaloc | 112-138:3395 |
| Aaloc | 1-105:3500 |
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