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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000254_pilon:332840..336191+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002081 ID=XLOC_002081|Name=XLOC_002081|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3352bp|location=Sequence derived from alignment at sc0000254_pilon:332840..336191+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagttttctgtttttctttggttttgcgGTTTGCTTGTGAAAAGTTC
GTGCGGTAAGTTTTTACCCTACctaaatgtctaaaaaggtgctCTAACCA
GCTTACACATTTTGTACAGACTAGTGTACacataaatttttaatgaatct
GCACAAATTATTTGAGCTAGAGAGAAAGATTGGAATTGCTAAGATTCGTC
TTAGATTCAAATGAAAGGATGTTTAGTGCAGTACAcggtttttttcataa
gaacatccaaaatatttgaagcctttggatattcctaactttttgagttt
taagcctaaaaatgttcttaacatgttcttattttcaccattttgtgagt
atttttgtccattttcctaagaaatcgggtgttttaaggtctgtaaagcc
ttaacatgttcttaccttgctcttaacattttggccatcgaagccttatg
ttcttatatagtttgttcttataaaaagaaaaacgtgtaagagTTGAGAT
GCAGTGGACTTccatctacacgttttttttttataagaacgtcaaaaaat
ttcgaagccttcggatgttcttagttttttttgatttgaagcctaaaaat
gttcttaaaatgttcttattttcagcatttttttagcattttgatgtaat
ttcttaagaaaatactGTTTTTATGTcaccaaagccttagaatgttctta
gaatgttcttaaatttttgggcctcgaagccttatgttcttatatagttt
gttcttataaaaaaaaaaacgtgtattatgaAGTTTTTCCAACTAAGTAG
CCAGGCAACCTGTTTAATTTGATTGGAGGAACTCTTTCAGTACTGACCAG
TTAAATCTTCTTCATTTATAAAAGATTCTTCCCAACTTCCCGACTGAGAA
TCTCCTTGCTTTATTAACGATTGTTTCGGCTGCCGGTAATAGTGATTCAG
GACATAGATCTTGAAAAGAgcttgaaaagagctttccaacaaACCCAAAC
ATGACCTATTTTGATTTAATTAAACTCAAAAATTGCATTTACAGTTGGCG
TACTGtggctttgaaaaaaatactttaaaatttAGTTTCCTACAGTACTT
AATGATTTAAGAATGATTTAAGTCACATtaggttcgaattatggagattC
AGCTTTTTTGTTGTAGAAGTTGCCTTGGACGATGAAGAAGTTTTTGCAGA
TGATGGATTCTTAGACAAGAAGCCTGTCGCAGATGAAGAATGGCCTCCCT
ACAGTAATGAAAAATGCTCACAAACGACTAAACTCAAAGCTATGTATGGT
ACCGCCATTTTCAGAACTTCATTAAGTaaaaaaccgatgacgtcacTTGA
AGTCGATATCGAATGGAACGCGTTGAAATTCCACCCAacagagaacatcc
aaaagaaGGGCGGTGTTTATATTGCGTACACTACAGGAATGAAGGGCGGA
CCGGGCGGATATTTTGGAGTACAAATCAAGGGAAATGGAGGTAGGTTGAT
GATTATATCACCCTCAGGCTGGTTTTGTTTTGAGTATTAAAATCGAAATA
AATTTGTAATCGAATCAATCGACCAATGAAAgtaataaaatttgataatc
aTCTTAGACAATTGAATCCATATTGAATTGTTGCATTGTGGGTTGAGCTC
AGTCTGTTCAGCTACAATTTTTGATCTCGATCAATCTGTTAATGTACGTC
AAATTTTTGTTCCGATGTCAACCTAATATTCTCACCAAATTTTGAtttgt
acacccctgtctcgcagccacggccgaacttttttcctcagcgggtctgt
gacacaggggtgtatttgtGGCTGATCATCTCACTAAGACAACAATTATC
AGGACAAAATCTCTTTCTTTCGACTTTAGGCCAGTTCATATTTTCTATTT
GGGATGGAGACAGGACATTCCAAAAAGATGGGGAAAAACAAATCAAGAAA
TCCACAAAGCTTGCTTGGCCCATTGATATGAAAAATTGTAAACGGAATTG
CCAAGACTGTGGCATTGCAGCATTGAAGGAGATTGGGAAAGAAGGATTTA
CCACTGGCACAAAATGTCTCATAAAACATGCTTCCATGAAGGTTCGTCAG
TTTAAAAGGGAAAATTAAGTACAataaaagtcataatatttgagaaaaaa
gggaaattcctgtgaaatcttataaccacaaacgatttggaagagctaat
tatatatactttcatttatttcaaaaggAAGGTGACCGATACAAAGTGAA
ATTAGAGCGTGTGACCAAGAAGAGAACAATCAACACTAAAAATTTTGGTG
GCTTCAAAGAAGTTCATAAAGAAGTTTTAAATGAAGTCGATCGAGAGGTC
ACCGGTAATTGCTTTACACAAGCGAGATTAtttatcggagatattctacg
gctacggttgtgGGGCTGCCAATGCGGGTCGTTACCAACGTCGACAtatc
gttgtctactttgctccgTACGGGAAAAACtccaaaacaccgtataagca
aagtcgacataatgccgtacgtcagatatcgaacttgctttcacccgcca
ttatcgccttactcgccattttcCTCGCCACtttaaccgtagccgtagag
aatttcagatacataatctcgctattcaTTTTTGTACACGGCTGTTTTTA
AGAAATCTGTAAAAAGCTCAGATGTTTTTGTGATATTCAAtcttgaatgt
tcttaaaatgtttatgACTTGTCTTCTTCATTCATTCTAAAGTGAGTgtc
caaataagaaaattgaaaagtcGACTTTCTACGTCTTTTGTtagtacaaa
aatattttagatcaAACGTTCCACAAATGTTTCGATATGAAAATAAAGAC
TTGAGATTTCCCGATGGAGAATATTCGCCAAATAGAAATTAGAGTTTAAA
AGAAAGTACTTCATGACattttcccgatcgggaaacgaACTTTACTTTGA
TAAATaactaaaagaaaaagtatATTTATTTATCTGGTAGGATCTGTATG
GACAGTCAAAGCAATCGTTGTCAAAGGCGAATCCAAAGGGTCCGAAATCC
CAATCGGAACCATTCTTTTCGAATCGGATAAAATCGGATTCTACCGATTG
GGTACATTTGATGAAATGCTGGGCTGCAATAAATGCAATTCGATTTATCA
TAAGGATACACGGTATGGTCCAAAAGTCGGAGCTGATGACGGCACCTTCC
AAAAGCCAATCAAAATGAACGGAAAAACAAGATATTATGATTCTACTTGT
AAGAAGTATCATATCTCAGGTTCGAAAAGCAAATCAAGCATCACTTTTGA
GAGTGGTCCCTTCACAGAAGAAGTCACTAAAGGAAAAACACAAGTCTGgt
ga Coding sequence (CDS) from alignment at sc0000254_pilon:332840..336191+ >XLOC_002081 ID=XLOC_002081|Name=XLOC_002081|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2160bp|location=Sequence derived from alignment at sc0000254_pilon:332840..336191+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagttttctgtttttctttggttttgcgGTTTGCTTGTGAAAAGTTC
GTGCGatgaagttttctgtttttctttggttttgcgGTTTGCTTGTGAAA
AGTTCGTGCGAAGTTGCCTTGGACGATGAAGAAGTTTTTGCAGATGATGG
ATTCTTAGACAAGAAGCCTGTCGCAGATGAAGAATGGCCTCCCTACAGTA
ATGAAAAATGCTCACAAACGACTAAACTCAAAGCTATGTATGGTACCGCC
ATTTTCAGAACTTCATTAAGTaaaaaaccgatgacgtcacTTGAAGTCGA
TATCGAATGGAACGCGTTGAAATTCCACCCAacagagaacatccaaaaga
aGGGCGGTGTTTATATTGCGTACACTACAGGAATGAAGGGCGGACCGGGC
GGATATTTTGGAGTACAAATCAAGGGAAATGGAGAAGTTGCCTTGGACGA
TGAAGAAGTTTTTGCAGATGATGGATTCTTAGACAAGAAGCCTGTCGCAG
ATGAAGAATGGCCTCCCTACAGTAATGAAAAATGCTCACAAACGACTAAA
CTCAAAGCTATGTATGGTACCGCCATTTTCAGAACTTCATTAAGTaaaaa
accgatgacgtcacTTGAAGTCGATATCGAATGGAACGCGTTGAAATTCC
ACCCAacagagaacatccaaaagaaGGGCGGTGTTTATATTGCGTACACT
ACAGGAATGAAGGGCGGACCGGGCGGATATTTTGGAGTACAAATCAAGGG
AAATGGAGGCCAGTTCATATTTTCTATTTGGGATGGAGACAGGACATTCC
AAAAAGATGGGGAAAAACAAATCAAGAAATCCACAAAGCTTGCTTGGCCC
ATTGATATGAAAAATTGTAAACGGAATTGCCAAGACTGTGGCATTGCAGC
ATTGAAGGAGATTGGGAAAGAAGGATTTACCACTGGCACAAAATGTCTCA
TAAAACATGCTTCCATGAAGGCCAGTTCATATTTTCTATTTGGGATGGAG
ACAGGACATTCCAAAAAGATGGGGAAAAACAAATCAAGAAATCCACAAAG
CTTGCTTGGCCCATTGATATGAAAAATTGTAAACGGAATTGCCAAGACTG
TGGCATTGCAGCATTGAAGGAGATTGGGAAAGAAGGATTTACCACTGGCA
CAAAATGTCTCATAAAACATGCTTCCATGAAGgAAGGTGACCGATACAAA
GTGAAATTAGAGCGTGTGACCAAGAAGAGAACAATCAACACTAAAAATTT
TGGTGGCTTCAAAGAAGTTCATAAAGAAGTTTTAAATGAAGTCGATCGAG
AGGTCACCGgAAGGTGACCGATACAAAGTGAAATTAGAGCGTGTGACCAA
GAAGAGAACAATCAACACTAAAAATTTTGGTGGCTTCAAAGAAGTTCATA
AAGAAGTTTTAAATGAAGTCGATCGAGAGGTCACCGGATCTGTATGGACA
GTCAAAGCAATCGTTGTCAAAGGCGAATCCAAAGGGTCCGAAATCCCAAT
CGGAACCATTCTTTTCGAATCGGATAAAATCGGATTCTACCGATTGGGTA
CATTTGATGAAATGCTGGGCTGCAATAAATGCAATTCGATTTATCATAAG
GATACACGGTATGGTCCAAAAGTCGGAGCTGATGACGGCACCTTCCAAAA
GCCAATCAAAATGAACGGAAAAACAAGATATTATGATTCTACTTGTAAGA
AGTATCATATCTCAGGTTCGAAAAGCAAATCAAGCATCACTTTTGAGAGT
GGTCCCTTCACAGAAGAAGTCACTAAAGGAAAAACACAAGTCTGgtgaGA
TCTGTATGGACAGTCAAAGCAATCGTTGTCAAAGGCGAATCCAAAGGGTC
CGAAATCCCAATCGGAACCATTCTTTTCGAATCGGATAAAATCGGATTCT
ACCGATTGGGTACATTTGATGAAATGCTGGGCTGCAATAAATGCAATTCG
ATTTATCATAAGGATACACGGTATGGTCCAAAAGTCGGAGCTGATGACGG
CACCTTCCAAAAGCCAATCAAAATGAACGGAAAAACAAGATATTATGATT
CTACTTGTAAGAAGTATCATATCTCAGGTTCGAAAAGCAAATCAAGCATC
ACTTTTGAGAGTGGTCCCTTCACAGAAGAAGTCACTAAAGGAAAAACACA
AGTCTGgtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254_pilon | genome | sc0000254_pilon:332840..336191 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 721-1080:2993 |
| Aaloc | 592-717:2228 |
| Aaloc | 382-591:1882 |
| Aaloc | 58-378:1169 |
| Aaloc | 1-54:1 |
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