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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000254_pilon:217850..220369+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002080 ID=XLOC_002080|Name=XLOC_002080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2520bp|location=Sequence derived from alignment at sc0000254_pilon:217850..220369+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGACGGTAAAACAGGCAAAGGTTTCGTCAAAAGACATGGCAAGCT
TCTAAAAGGACTGTTATTCACAAGTTTGGGGATTGTCATTATAATGCTTA
TAATTACATTAACAATATGGGTTATACTGCCTTCCTTTCTAACCTCTGAA
AAAACTGGAGTAAGCCCAAACAAGACTATTTGTTTTTACGCTAACTGGGC
ACAATACCGAAAGAACGAAGGTAGATTTTTACCGGAGAATATTGATCCGT
CATTATGCACGCATATAACATACGCACATTTGAAAGTTGATCTGAACACT
CACGCCCTGGTACAGAGACAACCAAATGATGATTTACTGCTGGCCCAAAT
TGTGGCACTGAAAGAAGTCAACCCTGAGCTGAAAGTTATCATTTCTGTTG
GTAAGCAAatattttttggacaaattttttgGCGTTTATAAGCTACTTTC
CTGTTCAATGAAGAAAATAACGGTAAAGTTAACTTaatctaattcgatct
tcaaaggaTTTAGAATTATCTTCGAATTACGGTATTTTATTTCACTTTCC
AATTAAGTGAACCAAtgatttagttcgaattacagaaacattcgaattaa
cagagagttaactgtatttttgaaaataattaaaggATAACAAGAGTTTC
AGATTTGACGTTTTCTGTGGGCAACCTTCGTAGTCCTTCTCACATTGTAT
TTGTGTCTTATTGAGTAATAACCTTTTGAACCAGCATTCTAAATGGGTCT
AGATATCTATACAATATATTCTTTGTCTAAATTGCTCCCAAAAAAGCTAA
CAAttctttttcttgttgttttgaCCATACCTAACACTGACTCGTAGACG
TcccaaaagaaaagtttttttgaatctGGAATGATAACTTAGCAATCTAA
AAGTTTATCTAATACTTCAATTGCGGATTGATGATCGCCCACGCTAAAAT
GAGCGAGCCAATTTCCCATTGGAGAGTAATGATAATCTGCAAGTTGTACT
gtctcttcagttaacaatgcctaaTATCAATATTACTCCattactcgaaa
tttccatatcTTGAACAAATGTGTGCTTCTCGTACTGGTGCGAGTTATGA
AAATCCAactgtttcttgatttttaagGTGGATGGAATCATGAGAAAGAA
CCACGATTTTCGAATATGGTACGAAATCAAACAACTAGAggaatttttat
tcaatcttcCATATCATACATTCTTCAACATCGGTTAGATGGGATTTCTA
TTGATTGGGAATATCCGACACATAGAGGAACTTCAGGACCGGAAGATAAA
CATAGGTAACCTTTTGgaacacaacattgtttcaacatttatctaacgct
aaatggacgttgtgaacattaaatgaacgttgaaacaaagtTATTTGCCA
GCTGAGATAGCCCTGTCCCAACTGGGATACAACGCTGTTTTAAGCATCAA
AACGAACCCGTCTTAGTTACCAAGTGGGAATCtgtcaaatgaaaaataag
aaaggCATAAAAATATATAGATCCAAAGTGACCTAAATAACTCGCAAGGG
GTgcaaagaaacattttttaaattatgcAAGCTTCCCAATTATAGAGGTT
CAAGCAGCAGACATTCGAATTGCGGGGTATAAAATAACATGGTAAAGAAC
AGCGATGGGAATTTACAATTGCTTGTGGTTTGGACGGGCTGTTGATATTT
TAAATCATACTGTTTAAGTTCAAAATCGGTGCGAATGTTCGAAAGCATGA
AATTTAGTCAAAAAGCAATGTATTGAAGGCTTTATTATGATTCCTTTATT
ATCAGGTACACACTTCTACTAAGAGAATTCCGGGAAGCTTTCACACTGCA
GCAACTCCCTTTCACACTCTCAGCTTCGGTGTCCGCCGGCAGAAGAGTTA
TATCTAGTGCGTATGAAATTCCTGAGATTGAACAGTACGTCCATTGGGTT
AACATCATGGCGTACGCCCTACATGGGGCGTGGGAGGACGAAACAGGCCA
CCATACTGCGATGACCGGTGGCCTACCAAACGTACCAGACAGTATTGAAG
CTTGGAGAGAACTTGGTATGCCAGATGATAAAATCAATGTTGGAGTTGCT
ACATATGGAAGAACATATAAACTACTTTTCAAAGAAGAATTCGATATAGG
AGGTCCAGTACTTGGTGCTGGAAACGCTGGAACATACACCAAAGGAGCTG
GCATTTTGTCTTACTATGAGATATGTGCTCTGAACTGGACCCATAGGACG
CCGTATTGGGAGAGTGTTGCTGGGAAGCCTTACGCTTCAGACAAAGACCA
ATGGGTCGGTTATGAAACACCTGAGAGTATTGCATCTGAAATCCGGACAC
TTTTCTCGGACAGATGTTATCATGGTATAGCTGTCTGGAATTTAGGCTAT
GATGATTTTAATGGAACATTCTGTGGACAAGGAAAATTTCCTCTTTTGAA
ATCAGCCGTAAAAACGTTGCATGAAAGTCGGAGTTGTAAAGTGACTCAAT
CTAATGCGTCTGTGCCTTAA Coding sequence (CDS) from alignment at sc0000254_pilon:217850..220369+ >XLOC_002080 ID=XLOC_002080|Name=XLOC_002080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000254_pilon:217850..220369+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGACGGTAAAACAGGCAAAGGTTTCGTCAAAAGACATGGCAAGCT
TCTAAAAGGACTGTTATTCACAAGTTTGGGGATTGTCATTATAATGCTTA
TAATTACATTAACAATATGGGTTATACTGCCTTCCTTTCTAACCTCTGAA
AAAACTGGAGTAAGCCCAAACAAGACTATTTGTTTTTACGCTAACTGGGC
ACAATACCGAAAGAACGAAGGTAGATTTTTACCGGAGAATATTGATCCGT
CATTATGCACGCATATAACATACGCACATTTGAAAGTTGATCTGAACACT
CACGCCCTGGTACAGAGACAACCAAATGATGATTTACTGCTGGCCCAAAT
TGTGGCACTGAAAGAAGTCAACCCTGAGCTGAAAGTTATCATTTCTGTTG
ATGGACGACGGTAAAACAGGCAAAGGTTTCGTCAAAAGACATGGCAAGCT
TCTAAAAGGACTGTTATTCACAAGTTTGGGGATTGTCATTATAATGCTTA
TAATTACATTAACAATATGGGTTATACTGCCTTCCTTTCTAACCTCTGAA
AAAACTGGAGTAAGCCCAAACAAGACTATTTGTTTTTACGCTAACTGGGC
ACAATACCGAAAGAACGAAGGTAGATTTTTACCGGAGAATATTGATCCGT
CATTATGCACGCATATAACATACGCACATTTGAAAGTTGATCTGAACACT
CACGCCCTGGTACAGAGACAACCAAATGATGATTTACTGCTGGCCCAAAT
TGTGGCACTGAAAGAAGTCAACCCTGAGCTGAAAGTTATCATTTCTGTTG
GTGGATGGAATCATGAGAAAGAACCACGATTTTCGAATATGGTACGAAAT
CAAACAACTAGAggaatttttattcaatcttcCATATCATACATTCTTCA
ACATCGGTTAGATGGGATTTCTATTGATTGGGAATATCCGACACATAGAG
GAACTTCAGGACCGGAAGATAAACATAGGTGGATGGAATCATGAGAAAGA
ACCACGATTTTCGAATATGGTACGAAATCAAACAACTAGAggaattttta
ttcaatcttcCATATCATACATTCTTCAACATCGGTTAGATGGGATTTCT
ATTGATTGGGAATATCCGACACATAGAGGAACTTCAGGACCGGAAGATAA
ACATAGGTACACACTTCTACTAAGAGAATTCCGGGAAGCTTTCACACTGC
AGCAACTCCCTTTCACACTCTCAGCTTCGGTGTCCGCCGGCAGAAGAGTT
ATATCTAGTGCGTATGAAATTCCTGAGATTGAACAGTACGTCCATTGGGT
TAACATCATGGCGTACGCCCTACATGGGGCGTGGGAGGACGAAACAGGCC
ACCATACTGCGATGACCGGTGGCCTACCAAACGTACCAGACAGTATTGAA
GCTTGGAGAGAACTTGGTATGCCAGATGATAAAATCAATGTTGGAGTTGC
TACATATGGAAGAACATATAAACTACTTTTCAAAGAAGAATTCGATATAG
GAGGTCCAGTACTTGGTGCTGGAAACGCTGGAACATACACCAAAGGAGCT
GGCATTTTGTCTTACTATGAGATATGTGCTCTGAACTGGACCCATAGGAC
GCCGTATTGGGAGAGTGTTGCTGGGAAGCCTTACGCTTCAGACAAAGACC
AATGGGTCGGTTATGAAACACCTGAGAGTATTGCATCTGAAATCCGGACA
CTTTTCTCGGACAGATGTTATCATGGTATAGCTGTCTGGAATTTAGGCTA
TGATGATTTTAATGGAACATTCTGTGGACAAGGAAAATTTCCTCTTTTGA
AATCAGCCGTAAAAACGTTGCATGAAAGTCGGAGTTGTAAAGTGACTCAA
TCTAATGCGTCTGTGCCTTAAGTACACACTTCTACTAAGAGAATTCCGGG
AAGCTTTCACACTGCAGCAACTCCCTTTCACACTCTCAGCTTCGGTGTCC
GCCGGCAGAAGAGTTATATCTAGTGCGTATGAAATTCCTGAGATTGAACA
GTACGTCCATTGGGTTAACATCATGGCGTACGCCCTACATGGGGCGTGGG
AGGACGAAACAGGCCACCATACTGCGATGACCGGTGGCCTACCAAACGTA
CCAGACAGTATTGAAGCTTGGAGAGAACTTGGTATGCCAGATGATAAAAT
CAATGTTGGAGTTGCTACATATGGAAGAACATATAAACTACTTTTCAAAG
AAGAATTCGATATAGGAGGTCCAGTACTTGGTGCTGGAAACGCTGGAACA
TACACCAAAGGAGCTGGCATTTTGTCTTACTATGAGATATGTGCTCTGAA
CTGGACCCATAGGACGCCGTATTGGGAGAGTGTTGCTGGGAAGCCTTACG
CTTCAGACAAAGACCAATGGGTCGGTTATGAAACACCTGAGAGTATTGCA
TCTGAAATCCGGACACTTTTCTCGGACAGATGTTATCATGGTATAGCTGT
CTGGAATTTAGGCTATGATGATTTTAATGGAACATTCTGTGGACAAGGAA
AATTTCCTCTTTTGAAATCAGCCGTAAAAACGTTGCATGAAAGTCGGAGT
TGTAAAGTGACTCAATCTAATGCGTCTGTGCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254_pilon | genome | sc0000254_pilon:217850..220369 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 580-1293:1807 |
| Aaloc | 403-576:1130 |
| Aaloc | 1-399:1 |
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