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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1364076..1367233- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001348 ID=XLOC_001348|Name=XLOC_001348|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3158bp|location=Sequence derived from alignment at sc0000078_pilon:1364076..1367233- (Clytia hemisphaerica_ch_hm2_pilon)
AACAGCGTCATCGTATCGTACCAGTTAAGCAACAAAACAGAAGCATACAC
AAAAATACAAGTCATTCTGGTCAACCGAGAATCGAACGAATCTTTCCAAT
TTTCTACCAAAGCAATTGTACCAATGGCGAAATTTCAATTGAATGATTTA
GAATCTGGTACTCAATACAAGGTCAAATTAGCAAGCATGTCACCGGATAA
TCGAACTAGTGAAATGAAAGAGAAAGACTTTCTTACAGGTACGTACCAAA
GAACTAACAGACTCGGGGGGTCACTTAGGCATACGGGGACGTGCAGCATG
GCCAGGATCCGATTTTTAGGCTCTCTGACAACGTCTGACAGTGTCGGCTT
TTGGTTATTTTGGACAAATTATAAGGGTGGAAATGAGAAAGATTTTCAAT
TTTTCGTGGAAATTGTTTCGCTTTTTGTTCCGACAGAGTCCAACACGTCC
TCGTCAGCCGTTAAGATCAGTGCCCCCCTCCCCGGGCATATCACGTTATT
TTATGTTTTGTTCCAGTTGAAAATATACCTTTTCCTTTTAATTTACCGTC
ATTGAAGTTTTAAAAATGTGCAGATCATGGGGAGGTCAAGCAGTTAGTAC
AAGACATTATGCCTACTAACTGCTTTTTCGCAAGAAGTTAGTAACACCAC
CACCCTTTGTACACTTAGTACTAACTGAATTTGGGGTCAAATTCACATAC
ACCACCCTTGAAAATGACTTTTTGACCATTATGGAGGCAATAGAACTGGA
TAAAACAAAATTTAATATCTTAAATGTTTCAATTTTCCATTTCTTATCAA
TTTACCACCCTTTTTTGCAGTTAGTACCCCTGAGTACTAAGTGATTTCAT
CCAATTAACATGGCACACCACGACATATTCAAGCGTCATTATTCGAATCT
TTTGAATACTCAGATTAAAACAACTTTCTTCAGTTTGAAAAATGTCTGTG
CAGATACTTCATAGAGGTCAATAAACCTGAAATATTGCTATAAAATAAGG
TATTTAGATTGAAAATGGTGAATCCCACGTATTGGATGAATATTAGAGTC
CTCTTACTATTTTTATATCCTGAACCACAGCTGGACCTAAACGAGTTAAA
CAAGCCGTAGTAGACCACCTTACTGATACCACAGCCCAAATCAGCTGGCA
AGCAAATAAGAATCCAGTGGATTCATATGAGATCAAAATCACCAATAACG
CTGGTCAATCATCCATTCAGAAAGTCCTTGGCAATATTACCACCATTACA
TTGATGGATTTAAGCCCTGATACAAAGTATATGGTAGAAATCTTTGCTGT
GAAGAATTCAATAAAAGGAATGGAGTCGGAAACGATAAACTTCCATACAG
AACAACAAGGTAGGTTGAATGTCATCAGAGTGCGCGCACCCAGTTGGCAA
TCAACGTTGTTGATAAGTTTTAACGTCCATCTAACATCCCTAACGTTAGA
TTAACGTTGAAACAATGAGACAATATTAGACAGCTAGAAAAGAAGTTACT
GCTAGTACACCCCCTGTCCCCTGTCACTGACTGAGTTGGAGCCCTACCTA
CTGAAAAGATTAGTCTACGTACCCGGTAAAAAAAATTTCATCCCTGTTAC
AAAAAACGACACTGAATTTTCACCACTGCTAGGAATGTCTATATAACTCT
TAAATTCCCACTGGATTATTAGCAGTTAAATAAATTTGAATGCTTTAGCA
ACTAAATACAAGATTCTTTCCATCGATGGTATTTATCTTCTATTTCTACA
AGCTAAAAACATCGATGGTGTTTATCTTCTATTTCTACAAGCTAAAAACT
TAAAAAAATAATTTTCAAGTTTGTAAGTTAAAAGATCTCTTTGAAATATT
TTGGAGATTCATTATGGTAAATCACCACATATTTCTCAAAATACTATATA
GAGCTAAAAAGTAATGCCATATCTTGATAACAACAATAGGCACCGAAAGA
TTTAGCACAAAAGGGAAATTCCCTCAAAACTTTAAAACCGCAAGTAATTT
TTAAGTGCTTTAAAGTACGGTTAGAAAGTGGAGTTTTATTATTAGACTTG
AGGAGATTAGGATCTCGGGATCCAAAAGCTCAAAATGTTCGAATATGGCT
GAGAACATAGCCTGAAAGCCACTTAACCCCTCCCAAATCAAGAAATCCAC
TGAAACAAAGTGGAAGTACTGAAATCACAATTCTCGCCCGAGCTTTAGAT
TCTAGAAAACGTTAAGTTACCCAAAATTGACAATATATTTCGGCGCTGAC
CAGCAAATAGCAGGTAGTAAATAGCAACTACGATCATCAATTATTTCTTA
CATCTTTTTTAGTTCTTGTTACAAAGGAACCAAAAACAAACACAACAACC
AAATCATCAACAAAGCCTTTCACTGGAGTTACGCCACAGCCAGATTGTAA
GTTTTCATCAGTAGAGGATCATCTCTCAAATTTACTCACCAGGCATCTAT
TATGTTTTTTACATTGATTTTTAAGTCCCGAATGTGCTACAGAGGATTGG
AAACGAAGCCACTTATTTCCCATTCAAATGAGTGACCCACATGTGTTTTT
CACACAAACGCCATATTGAGAGTAAAATCTTTCGTAAATATCGGGTGTTA
ACAGAAATAAAAGTACGGGCAATCTACATGATTAAAGCAAGGTCAGTCTA
TTCGGAACCACCTGCCAGATAATGTTGTTTCAAAGTTCATCTAGCGTTAA
ACATGGACATTGTTTAGACCCCCCGGTTTTCGTGATGGCGTGATTGGCGT
TTTTTTCAAGTTCGTGATTTCGTGATTTAAGATTTTAAAGTGTGTGATTG
CGTGATCGGAGGAACCAACGTGATCGGGATATAAAGGAAATTTAACTCGT
GATAACGTGATTTGGGAATTCTTTGCGTGATTGCGTGATTTGAAAGGTGA
CTAGGGGCCTAATTGTTAAGGCCTGTTATGCTATTTGAGCTAAGTTTTTA
CTTTGAATCTAAATTATCTTTTTATATTTTTGTAGGCCCTGATATATGCA
AGGAGAAAGGAGTTATGTATGGAAACATTGCTCATCCAACAAACCCTAAA
AGATTTATACAATGCTCTTTTGGGAAATCATTCGGTTGTAATAATTGCGC
TCCTGGAACATATTTTATTGCTGGTGATGGGAAAACTACAGGTGGCTACT
GCGCATGA Coding sequence (CDS) from alignment at sc0000078_pilon:1364076..1367233- >XLOC_001348 ID=XLOC_001348|Name=XLOC_001348|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1548bp|location=Sequence derived from alignment at sc0000078_pilon:1364076..1367233- (Clytia hemisphaerica_ch_hm2_pilon)
AACAGCGTCATCGTATCGTACCAGTTAAGCAACAAAACAGAAGCATACAC
AAAAATACAAGTCATTCTGGTCAACCGAGAATCGAACGAATCTTTCCAAT
TTTCTACCAAAGCAATTGTACCAATGGCGAAATTTCAATTGAATGATTTA
GAATCTGGTACTCAATACAAGGTCAAATTAGCAAGCATGTCACCGGATAA
TCGAACTAGTGAAATGAAAGAGAAAGACTTTCTTACAGAACAGCGTCATC
GTATCGTACCAGTTAAGCAACAAAACAGAAGCATACACAAAAATACAAGT
CATTCTGGTCAACCGAGAATCGAACGAATCTTTCCAATTTTCTACCAAAG
CAATTGTACCAATGGCGAAATTTCAATTGAATGATTTAGAATCTGGTACT
CAATACAAGGTCAAATTAGCAAGCATGTCACCGGATAATCGAACTAGTGA
AATGAAAGAGAAAGACTTTCTTACAGCTGGACCTAAACGAGTTAAACAAG
CCGTAGTAGACCACCTTACTGATACCACAGCCCAAATCAGCTGGCAAGCA
AATAAGAATCCAGTGGATTCATATGAGATCAAAATCACCAATAACGCTGG
TCAATCATCCATTCAGAAAGTCCTTGGCAATATTACCACCATTACATTGA
TGGATTTAAGCCCTGATACAAAGTATATGGTAGAAATCTTTGCTGTGAAG
AATTCAATAAAAGGAATGGAGTCGGAAACGATAAACTTCCATACAGAACA
ACAAGCTGGACCTAAACGAGTTAAACAAGCCGTAGTAGACCACCTTACTG
ATACCACAGCCCAAATCAGCTGGCAAGCAAATAAGAATCCAGTGGATTCA
TATGAGATCAAAATCACCAATAACGCTGGTCAATCATCCATTCAGAAAGT
CCTTGGCAATATTACCACCATTACATTGATGGATTTAAGCCCTGATACAA
AGTATATGGTAGAAATCTTTGCTGTGAAGAATTCAATAAAAGGAATGGAG
TCGGAAACGATAAACTTCCATACAGAACAACAAGTTCTTGTTACAAAGGA
ACCAAAAACAAACACAACAACCAAATCATCAACAAAGCCTTTCACTGGAG
TTACGCCACAGCCAGATTTTCTTGTTACAAAGGAACCAAAAACAAACACA
ACAACCAAATCATCAACAAAGCCTTTCACTGGAGTTACGCCACAGCCAGA
TTGCCCTGATATATGCAAGGAGAAAGGAGTTATGTATGGAAACATTGCTC
ATCCAACAAACCCTAAAAGATTTATACAATGCTCTTTTGGGAAATCATTC
GGTTGTAATAATTGCGCTCCTGGAACATATTTTATTGCTGGTGATGGGAA
AACTACAGGTGGCTACTGCGCATGAGCCCTGATATATGCAAGGAGAAAGG
AGTTATGTATGGAAACATTGCTCATCCAACAAACCCTAAAAGATTTATAC
AATGCTCTTTTGGGAAATCATTCGGTTGTAATAATTGCGCTCCTGGAACA
TATTTTATTGCTGGTGATGGGAAAACTACAGGTGGCTACTGCGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1364076..1367233 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-774:172 |
| Aaloc | 520-600:845 |
| Aaloc | 241-516:2077 |
| Aaloc | 1-237:3159 |
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