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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1099080..1105796- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_001341 ID=XLOC_001341|Name=XLOC_001341|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6717bp|location=Sequence derived from alignment at sc0000078_pilon:1099080..1105796- (Clytia hemisphaerica_ch_hm2_pilon)
ACTTATCGTAAGAGTTTCAACAACGTAGAAGAAACTTCTGAAGAATATGA
AAAGAAAATGCAACTTGAAGAACAATTACGTGCTGCAATGGATAAATTAA
AGTAGGTGAACATGGTTTTTTTATATAAAAACAAACCTTATAAGGCTTCG
ATGACCAAAATATTAAGAACAAGGCTTTGCGAACATCCGATTCCTTAAAA
AATTGCACTAAAATACAAAAAGGGTGAAAATAAAAACATCATAAGAACAT
TTCTAGGCTTAACAGGGCTTAAAGCTCAAAAATTAAAGAACTTGCGACGA
CTTCAAAAATTTTGGATGCTTTCTTAAAAAAAACGTGTAGGCATTATTTA
TGCGATAGAAGTTTTTTCAGTTTGTCTGATTGATATCTAACTCTTTGACT
AGCATAAATAAGAAGCGTGACCGGTATAAGCTGACTAATCCACCATGTTA
TTTTTTATTCGGGTTGTAGACAGTGGGATTTAAATGTTTCGAATTGAAAC
GTTCGAAAGTCTAAGCTAAAAAATAGAAATCAGCACGGTGGAGTTGTTGA
TTTTAAAACTGGACTGGTTTCACAGGAAATCTGTAAATAGTTAGCCTATA
AAGTTAAGTTGTGCTACTTCGGGAAAACTTGAAAACCCCCTGTACGATCT
CATGTCGTTCCAAAATCAAAGAAAACCATTCTAATAGCCAAGTAGTATAT
AGAAGTATATAGGTTTTCTCCTCACTCATCAAGTGCTGCTCTTATTTTTT
TTGGCCCCTTTAATACTTGAAATATTCTTATCCTGTTCTTATTTTAAAGA
ACAAATTTTTTGCATCTTAAGTTTTTATCCTTCTTATTACCCTACTACAA
CTTACTTATCGTTTAAACTTAAAGATCGCACGCTTAAATGGGAATCTTCA
GGGTAATTCTTTTCTTGCTATTTTACTTGAGAGATTTCTGAAAAAGAAAC
GTAAACTCGACCCGTTTTTTTTTATCATCGTTATATTTCTTTAGATACAA
GAAACGACAAATGAAAGAATTACAAGAAGACCTGAGAGTGATGCAAGCCA
CTGCTGAATCCTTGACAGTCGATGAAAATGAACTTGTTGTAACCATGGAA
GAAAAACAAAGAACTATTGATAGGTAAGAATTGTGATTTTGTGTTTGTCA
TTCATTGATTGGTTGAATCGATATTTTACGTGGATAGTCAAGTAAGCTAG
GACTTTTTAGGCAACATTTTGTTTGTTTTCATGAGGTCCATGGTGAGCCA
ACAGAGTTATCTGTAAACTGAACTTAAGGGAACATTTAGAGGCATAGCCG
ACGTAACTCAGCTATCTATGAGCTGAACTGAACGGAAAATTTACGAAATT
ATAAATCCGACATCGACGGAGCGAGGCCTCGGACAGAGAACCCTTGTTTG
TGGCCGTGAAGCTTTATACTAGTCGGTGTAAATTACACAATGTTTCTGAT
TCATCGAAATCCCATTTTGGAAAAATGATCAATGTTATACTGAACAGACT
TGATACTTAAAAACACGTGTGTCACAGATCCTTTGGGAGCACTGTTCCTC
TGAAAAATTTGGCTCCAAAACCATCCCCATCGGTGTATTTGACCTATGAA
CAATAGAATTTCTATCCCCTTGAGATTTCGATAAAAATCTTTATCCCTAC
TGTGGAAACAATTGCCACTAGGACTGTGAGACTGGGGTGTAATATTTCTT
TTTTTGAATTTTAGCTTACAAAAAGAGCTTGACGTTCAAGAAGAGAAAAA
AGAGCGAGCGGACAAAATGACACGAAAAGTAATCCGTGATGTTAAGGGAA
GCAGTACTGCATTAAAAAAATCTAAAAAAGCATTCGAAGAAGGAGAGGCG
GACATCAAAGTACGAGAGCTACGAGATTTTAATAACAGTTTAATGAAGAA
ATTGGGTCTCATTTGTCGAGATTATCCAGACATTGCCCCCGTCTTAACAA
TGTATTGTCAACAATCAGGACTTCCGGTTCCTCCATCACCCGGACCAGGT
AGTTCCCGTGGCTCATCGACTACTGGAAGTGTTCGATCGAATTTGAGTTC
AGCTAGGTATGTTTGTTTTTAGATTCCTATATCTCCGACCAAAATGTATA
AGTTTTGACCGTTTATTCTAGGTGGTTTGGAATTTTCTCGATATTTTCGA
TATTTTCTATTTAAGTACACTTTCTTGTTAACGAAGGCCTTTGCTGATCT
GAAATGTGTTATCAACATACAATTATAGATTATTCAGATGTTAACCATCG
CCTAGCATATTTTACGCAAAACTGCGATAACGTGCTAAGATTAAAACTAC
CGAATTATATATATTCCTTGATTATCTGTAATAATCTTAATAGTAATTGT
TTAATACTCTACATTAAATCTCAAGGTTTGATAATAATTTAATTTCCTTA
ACATACAAGAAATTATATTCGCACGCGTATTATCCTGTATCGTTTGAAAT
GTTATTTTCATCTTTGTTTTTTGGACCTACCCCGGTGGGGTGAAGGTCCT
ATAAATTAACCCGTGTTCGTTAGTTCGTTCGTTCGTTCGTTCGTTAGTTA
CCAACTTTTCTCGAGATTGGCTCATTCAATTTTTCTGATTTTTTGCACAA
AGGTGCATTACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAA
AAAAATTTTTCCGGCCGGTAGAACCGGAAATGTCCCGAAAAAAGCGGTTT
TTTGAGATTTTCTCGAGATTTTATCATTAGTTTTTTGCGATTTTTTGTAC
ATAGATGCACATTAGTACTGCCGAAAAGGTGTCGAAAACCGTTTGCCGAA
AAAAATTTTTTTCCGGTCTGTAGAACCGGAAATGTGCCGGAATCGTCGTT
TTTTTCACATTTCCGTCACATTTTTTTCAAGTTATTTAATTGTTTCTTTA
CAGAAAAATGTTCTTATGATGATGCCCAAAACTTAGCATTGTTTGATTTC
CAAAAAATCATCCTTAAATCCGAACTCCTTAAAAATCGCCGGAACAGCCG
AAACCGGCGTAAAACGGTTTTCCTTCATTTTTTCAACTTTACTCGACAGA
TTTTCATGATTTTTTTTTGCACAATGATGTAAAATGGCAAGGCCCAAAAT
GTGACAGAGCCCAATTTTTCGAAAAAGAAATTTTTCCGGCGCTAGAACCG
AAATGTCCCGAAAAAAGCGGTAAAAAATTTTTTTTCCGGTCTGTCGAACC
GGAAATGTGCCGGAAATCGCGTTTTTTTCACATTTCCGTCACATTTTTCA
ACTTATTTAATTGTTTCTTTACAGAAAAATGTTCTTTATGATGATGTCCA
AATCTTAGCATCGTTTAATTTCCAAGAAAATCATCCTTTGAATCCGGAAC
TCCTTAAAAATCGCCGGAACAGCCGAAAACCGGCGTAAAACGGTTTTCCT
TCATTTTTTCAACTTATACTCGACAGATTTTCATGATTTTTTGCACAATA
ATGTAAAATGGCAATGCCCAAAATGTGACAGAGCCCAATTTTCGAAAAAG
AAATTTTTCCGGCCGCTAGAACCGGAAATGTCCCGAAAAAAGCGGTTTTT
TGAGATTTTCTCGAGATGAATGATTGATTAAAGTGTCGATATTATTTTTC
TTTCACCGTTAAACATCGATGCGTTTCTTAATTGCTTTCTCCGTTCCAAT
AGATATATAAATCGAAATTTGAAATTATACATTACTTCCATTAAATTCTA
ATTATTCGTTTTATAAATAGGTAGGTCCATTAAAGTATTACTTGTCTTTT
TCTCAGATCATCAGTGTCGTCGGTTCGAAGTGATACAAGTAGTGCACGAC
AAAGTCGACAAGCCTTGGGTACCGTGTCTGTTGACCTGTCTCTCAATGCT
TTCGCATCACACAGTCCGCTAGGTAGGTATCATTCTGCTACTCATTGAGT
TTAAAGCCAGAAGGGCTGACACACAACGTTGTTTCAACGTTCATCTAACG
TTAAATGGACGTTGTGAACATGAAATTGATGTTGAAACAACGTTGTGTGC
TATCTGGGAAGGGCTATAGAAGAATCTGCAACCTTTCTCATGTAAGAAAA
CGGAAAAAACTTCAGATTTTTGTTGTATTTTGGACAGCCAAAGTCGAACC
CAGTCATTTAAGGCCGGTCTTCACTTACGCGTGCTGCGTCGTACAGTTTG
GTTTCAATCCTTTTTGCTTGGAAAAAAGATTACATCATAAAATGTAACGC
GCGCTCGAAAAAAAAGTTGAATATACATTTCAACTTTTTCCAACCATTAC
GTCGCGGATCGCGCCAATGAAATTGCTTCATTTTTTTTTTTGACAAATAG
CTTTGCTAGATAAAGTGCGATCGCGATGCGCACAAGTGGAGACCGGCCTT
TAGTTCGCTCTTTTATGATTTTGATAGTGCTCACGTCTCTCAGTAAAGTT
AAGAAAGTGATGCAAGTGGCTCTGGGTACGAGATTGTTGGACGATGTGTT
AGATCTCACTAATCGTGCCAAGCCTTTTGAGCTACCTTTCCAACACTGCT
GGGTTTTTTATTTCTTTTTTCTTTATCAGTCTCTTCTGCCACCTTTCCCG
CCCGTTTTTCTTCGTCCGCCCTTCTCCAGTCCTTGCTAGGCAATAGGACA
AATAACACAGACCAAATCATACGTTTTTAAAATTCCACAAAAATGCATGG
ATAACAAAAATTTTGGTTTCTAATTAAATTATCAACTGCGGCTATTATGA
CAGTTTAATGATGTCTCTAAAAATGATTAATGATGTAATTTTCAAGTAAT
TTTACTACTGGTGAAAGTCTTTGTCAGAATACCGAGTAATTATTGATGAG
AAAAGGGGAAAATATTTAAAGGATAATCAGATGGTTTGAAATATTTAAAT
TTAAATTTAAATTTTTTGAAAGTAATGGGTTCTTACACGGTTCTTACGTT
GAAATTCTATTGCTTTCATCCTAAAAGCCAAAAATTAGTAACTTAAATAT
CTCGACTTTGGAAAATATTTTGAGATTTTGCTCAGGACAATAGAAGGATC
CAACATGTCAAATATTACAAACCATCTGATTATCCCTTTAAAGTTAACCC
ACATCTTTTCTTTTCTTAAATTGATGATCAGATATGCGGGACATATTTTT
GCCTGCAGAAATCACCTGTAGTCCTAAGTAAACATCCGAATATTTTTGCC
TAATTATTAATTTGGTTCAAAACACATTTCTTTCGTTAGATTTCGATTGT
TTTCCTACTAAAACTCAAAAAATATAGCTTGAATATCCCGAACCCAGAAA
CTAGTTAGGCAAAAATATTTCGAGGTATTGGTCAGGACAATGGAAGGAAT
CCACATGCCAAATATTTCAAACCATCTGATTATCTGTTCAAAGAATAAAC
ATATTCTTATCCTCAAATTGCCTGTACCAGGCAGCAAAATAATCTGTGAA
TTCCTCGGTGAATTCATACCCTTAAAGTGCATTTTCTCAAATTTTCAAAA
AGCCGTGGTTACACTACATTAATATCTTTAAAAATTTTGAAATTTTTTAA
TCAAAAATACATTAAAGAAATTAACTATTTTCTTTAAAGTCTTTTTGAAA
TTTTTGTATGTTGTATCAAATCTTCAATCGCTTTTTCTCAACTCATTTTC
TCACTCAACAAACGACATGAGTGAAAGGAGGAAGGCTGCAGCCCGTATTG
TGCTAATTCTTTTGTAACGGAAATTTCAGAGGAAATATTCGAAAAAGAAA
AGTCGAGCTTAAAAGGTCTTGCTGGGTACGCAGTTGGTTAAACTTAAAGT
TCAGGAACGAAAAAAGTGCCTAAGTACAACAACATATTTGCTGAACTTCT
TCGTCTACGTGACCAAGAATAATAGAAGAAGTCTATATCTCAGGATGAAC
ACAGAAACTCGTGGCTGATATCCATCCATCATGCAAAATCTTTCTCTTAT
CCTATCTTTCACCCCTATCTCATATTAGCCATATTACAGTTTAAAAATTC
CAAACGCTGGAAAATCTATTCATCGAAAAAATGTACAGAACTATCATGTC
GGTGCCTTTGATCTCGAGAGAAGTGAAGAAAAAAACTTTAAACTCTTTAC
GAAAAAAATGGTAAAGAATCGCAAGAAATGATTTATTTTTCAAGAATTTA
TAGGTCTTTATTTTCTTTAAAACTGTTACACTTGTAAATTTTTTAATCAT
AAAGACTTGATTAAAAAATTTCAGAAATTTTGAAATAAATTAATGTAATG
CAATTGTTCTTGGATTTGCTGAAATTTCCACCCTTACAGAGTGCACTTTT
CAAAAAGTCCATCCTTACAGTGGATTTCTGCTGTTTTGAAACCTTAACCA
CCGCACCTACTCGTCGGTCAATTTGCCTGACTGCCCCCCCCCTCTTACCC
AATGGCCACAAACGTCTTTTGGACGTCTAATGTACGTTTCTAGGACGTCA
AAGGCCTTAAAGCCGTCCATTGATTGAATGTCCATTGGTTATGAAGGTGT
GACTTTTGAAGGGAGAAAAAACTTGCTTTTCTATGCATCTGATGATTATG
AAATTTCATTTCAATCAATTTTTCAATCTCAGGAACACCGCCACGATCAA
CCGCCAGTTCTCGGGCGTCATCTGGCAAATCAACACCCTCTCGTACTCCT
TCACGAAGCACTTCCGCCTCATCGAATCGGACCTCACCAACCAAGAAAAC
ACCCACGTCTAAATCCAATTCACGCCCTCCAACAGGGCAATCATCCGCTT
CATCAAGCAAAAGATAG Coding sequence (CDS) from alignment at sc0000078_pilon:1099080..1105796- >XLOC_001341 ID=XLOC_001341|Name=XLOC_001341|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000078_pilon:1099080..1105796- (Clytia hemisphaerica_ch_hm2_pilon)
ACTTATCGTAAGAGTTTCAACAACGTAGAAGAAACTTCTGAAGAATATGA
AAAGAAAATGCAACTTGAAGAACAATTACGTGCTGCAATGGATAAATTAA
AACTTATCGTAAGAGTTTCAACAACGTAGAAGAAACTTCTGAAGAATATG
AAAAGAAAATGCAACTTGAAGAACAATTACGTGCTGCAATGGATAAATTA
AAATACAAGAAACGACAAATGAAAGAATTACAAGAAGACCTGAGAGTGAT
GCAAGCCACTGCTGAATCCTTGACAGTCGATGAAAATGAACTTGTTGTAA
CCATGGAAGAAAAACAAAGAACTATTGATAGATACAAGAAACGACAAATG
AAAGAATTACAAGAAGACCTGAGAGTGATGCAAGCCACTGCTGAATCCTT
GACAGTCGATGAAAATGAACTTGTTGTAACCATGGAAGAAAAACAAAGAA
CTATTGATAGCTTACAAAAAGAGCTTGACGTTCAAGAAGAGAAAAAAGAG
CGAGCGGACAAAATGACACGAAAAGTAATCCGTGATGTTAAGGGAAGCAG
TACTGCATTAAAAAAATCTAAAAAAGCATTCGAAGAAGGAGAGGCGGACA
TCAAAGTACGAGAGCTACGAGATTTTAATAACAGTTTAATGAAGAAATTG
GGTCTCATTTGTCGAGATTATCCAGACATTGCCCCCGTCTTAACAATGTA
TTGTCAACAATCAGGACTTCCGGTTCCTCCATCACCCGGACCAGGTAGTT
CCCGTGGCTCATCGACTACTGGAAGTGTTCGATCGAATTTGAGTTCAGCT
AGCTTACAAAAAGAGCTTGACGTTCAAGAAGAGAAAAAAGAGCGAGCGGA
CAAAATGACACGAAAAGTAATCCGTGATGTTAAGGGAAGCAGTACTGCAT
TAAAAAAATCTAAAAAAGCATTCGAAGAAGGAGAGGCGGACATCAAAGTA
CGAGAGCTACGAGATTTTAATAACAGTTTAATGAAGAAATTGGGTCTCAT
TTGTCGAGATTATCCAGACATTGCCCCCGTCTTAACAATGTATTGTCAAC
AATCAGGACTTCCGGTTCCTCCATCACCCGGACCAGGTAGTTCCCGTGGC
TCATCGACTACTGGAAGTGTTCGATCGAATTTGAGTTCAGCTAGATCATC
AGTGTCGTCGGTTCGAAGTGATACAAGTAGTGCACGACAAAGTCGACAAG
CCTTGGGTACCGTGTCTGTTGACCTGTCTCTCAATGCTTTCGCATCACAC
AGTCCGCTAGATCATCAGTGTCGTCGGTTCGAAGTGATACAAGTAGTGCA
CGACAAAGTCGACAAGCCTTGGGTACCGTGTCTGTTGACCTGTCTCTCAA
TGCTTTCGCATCACACAGTCCGCTAGGAACACCGCCACGATCAACCGCCA
GTTCTCGGGCGTCATCTGGCAAATCAACACCCTCTCGTACTCCTTCACGA
AGCACTTCCGCCTCATCGAATCGGACCTCACCAACCAAGAAAACACCCAC
GTCTAAATCCAATTCACGCCCTCCAACAGGGCAATCATCCGCTTCATCAA
GCAAAAGATAGGAACACCGCCACGATCAACCGCCAGTTCTCGGGCGTCAT
CTGGCAAATCAACACCCTCTCGTACTCCTTCACGAAGCACTTCCGCCTCA
TCGAATCGGACCTCACCAACCAAGAAAACACCCACGTCTAAATCCAATTC
ACGCCCTCCAACAGGGCAATCATCCGCTTCATCAAGCAAAAGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1099080..1105796 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 691-873:184 |
| Aaloc | 574-687:2961 |
| Aaloc | 232-570:5003 |
| Aaloc | 103-228:5723 |
| Aaloc | 1-99:6718 |
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