MSTRG.10990.3.p1 (mRNA) -

Overview


Name	MSTRG.10990.3.p1
Unique Name	MSTRG.10990.3.p1
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000078_pilon:691053..698765+
coding sequence from alignment at sc0000078_pilon:691053..698765+

mRNA from alignment at sc0000078_pilon:691053..698765+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>MSTRG.10990.3.p1 ID=MSTRG.10990.3.p1|Name=MSTRG.10990.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7713bp|location=Sequence derived from alignment at sc0000078_pilon:691053..698765+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGAAAAGTTTTTGCCGAATTTGGGGcttgggtcccagcgggtctgtgac
aaaaGCGGATATTTAAAGCTTCTCCttttttttATATGCAGGAACATTAC
ACGTAGGAGATGAGATCAAAGAAATTAACGGCATAAATACATCAATGTGT
TCTGTTGAACGTCTACAACAGATCTTGGTAAGATTTTGAAACTTATTTTG
TGTTTAAAGACTGTTTTACTCCCCTTCTCCCTAGCAGCTGCGTTTTTCAA
AGTTCAACAAAAGTCAGTTGTTATGGAATGTTGATTTTCGTTATAGTCTC
CGACGGTAATCAGAGGGAGGTGACCCGAAGGCTTCTCTTTCGAAAATTAT
CTACCCGAAGGGTGCCACTCCTTCTTCCTAATTTCCTCCACTTAGCCTTG
ATCCTTCTCCTTCCTTGTAAATTTAATCACTTATCATCAAGCAAAGGGGC
ATTTTTACAAAGTACGACGTCTTTGGGCAGCGATTGAATTGAACCCCTAG
GattgacgcaaaaaaaaaatagttatgATTAGTTCTACAATAACGCGCAA
TATTTTTAGGACGGCTGAAGAAAGTTATATTTTAGATTGCAATTTTCTTG
TCGTGTGAGTTAAACCTTTGCCTAATATTATATCAATgctttacttttgt
tttctacAGCGAGATGCGTCAGGAGATGTGACATTCAAAATAgtccctgg
ttgtcaaaatgaaGATCGTGCCAGCAAAGAGGTAAAGGAGATTTACCTTT
TAATGATGGGTGGTTCAttaaaaaagtcttttgaacTGAATCtattaaat
atattttctttgttgTAATCTTGTGAAAAGCGCACGACGTATGATTTTCC
ATCAAATACCTTAAATTAGGAAagcttttctaaaacttttCTTGTATCAT
TATACGCCGGTAACCTTTATTCGTATTCTATaagaacttcaaaaaacttt
gagttttaagccgaaacatgttcttaagattttacgAGTACTTttatgca
atttcttaagaaattgggagTCTTAGAGCCCGccaattttcttaacttgt
tctcaatattttggaCATCTTAGTCTTATGTTCttaagtatatatttttt
tgtataaaaaaatgtattttaaaaaTGCTTACTGCTGTTACTTCAATGTA
GGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGATATGA
TACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTTAGAA
GTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGTATCCTCTTTGCTTTT
TTCTTGCATTCAATGTTAATTAAATAAacattattatccatatagcggtc
attaagtaagccattaaagattcgaacggcgggcggtattgaaaggttct
atgactcaaatagtcatacccgtgctgagaaaactaaggcgtcgcgcttc
agagggctgaaatatcattaacagCCCTGTTTATAGGGcgataatagcga
gtttatgtatgtgtgtttttcagcgacggagacggtaaggttctaatttg
agtagatcctgaccagctgaggacgacggtaaatcagcacttttaccgtc
ctcgattttgcggggcggaatttcgggtttttccaaatcgcttctaccgt
cctcaaaagtgcaaatacataaactcggtaatgtcatttgcggcccgctc
ggaactttattgaagtccttgcattgaagcgaaaagactaaactaacgtc
agaaaaaaataaccttttggtcatttgcggcccgctcgcaagggtactca
aaacttgttaaagtcattgcattgaagcgaaaagactggCTGGcgctaga
aaaaaaactttatttgaatctccgatatggataataatagtaatagcgtt
aagctttcgttcgttgttgtcattaattctgcccttgcagtttgattatt
agccctctagtgccatttcccaaatgacactctcgggctaataatcaaac
tgcgcgggcagaaaataacaacaacgacctcaaactgaacgctattgtta
taataaacgcccccttctcatagacccactggcacccctcccactggaaa
aattggccagaatattgtccccggtggaaagtttttcttcaagttcttgt
ccccgctgaaaaaagtcaaataaaccaatcctcgcagcaaaatattatgc
catttttcccatccccacttgaaaacaaaagaattcaaattcCCAGCGCA
TaaaaaaaCGTTGGAATACAAACCCCCATCgggtttcagtccgttatttt
tatccccactggttgaaacaatcctaccgggtctgtgtaGAGTGGGTATA
TAAATGACCTTTAGTAATTTGATAAAAGGATTGAAGTGGGATTTAATATA
ACTGAAGTGTATTATGAACtgtaatatttcaatatttcaatatttctttt
gttcCAAAACCGTTGGAATTAACGAAGATTACATTCCTGTAACACTAACA
AgtgtaaaaatattgatatcTTTTATTGCAGGCAAGGAAAGTTGGTACTA
AAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAGTATGTTTGT
TgtgtcttttgtttttttataacgttttttGACATTGAACAAATCCAACT
AACTTTTGCATATAGCCGAGTTAATCTCTTAACAGATCGTCCAATTCTGC
GAATGCCACGCTCTGCTTTAAAAGGGATATGGCAAATGTGATGATCTGAC
ATGGTCGTTCAGACAAAACATAACAAACCGCGttgctttttgcttgaaaa
cgaaagtgaaagcaaCTGGGTTTTAATGTTTATGATTTGCTTTGGTTTTT
TGTGCAATcgttttgctttagccaatcagcGCGCTTGAAAGCTTATTTAA
TATTCATtccaaatctggatgaaaaagatcaaagcggtgTGCAGATTCTC
AGAAACAAGGCCTCCAAAGTAAATACGTGTCATACGtggagtatcagaat
ctgctcggataTAAAGTAATGTAAAACCGAATTCTCATACTATTTTTCAT
TATTAGACGTATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAG
GTAATGGACAGAATACAGCTCTTTGGTTTTCGGAATCAGCTACTACTTCA
GcagactctctctctaattgaACTTAAGGAGAGATTGTTGAATAGTCAAG
CCGCCAGCGCCTGAAACAAAGGATTCCTGGCTCGTATCCCCGCTCTCTCT
ATTTATAATTGTCAGTCAAGTTTATTAGCCGTAGTCcctgtgaaaacaat
cgaaagacttcTTGTATCTTGAAGTCCAAGATTACTGAGCTATCTACgtt
aaatatcgactctataTCTATCtaacttcttttattcaaacCTTTCTGTG
CTGCAGTTTTTGGGTGATATAAAAAGGGGAAGGTGTTGCTCAGTGTAGCT
GTTGCAATTATCAATTTAGACAggttaccattttgaattttgaacccCAG
CGGTGCACATTGCCTTCAATCAATCCCGAAGGTCAGCACACCCTTACGAG
TAAATAACTTAATAGCTGTGTCATTTTCGTTTCATAGTTCACTATAAAAG
TCTCAATATATCTATCCTTTCTTTCTAGCTATTACATGTTTATGGCCtaa
aaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCGCTAGGCTTAATA
CAGGTTTGTAGTTTTTAAATctgatttctttaaaatttgatcaattaCTT
AAGTTCATTAACCTTTAAAATTTTACGTCAGTGAGGTTATGTATTTGGCA
CTGTTGGGAACGGTggagtgactgaaacgatttAAACAACCTGCAGTTCT
GAACTGCAAAATCGAGGActgtaaaagtgctgatttaccgtcacCCTCAG
TCAAAGAGGATCTGGAGAAATAAGAAGTCTCCGTCACTGAAAACACGTAT
ACATAAACTCACCTTTGGTAAGACCATGACATTAGATATTCTTAACGTTG
TCCTATTCATTTTGCAGCATTCGATAGATTGAACTTGGTCACTTACGAAG
AAGTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGT
AAGTACAATGGAGGAGGCCCTCCCCCCAAGCGGTTGTCTGTGATGGCGTA
ATTAGGCTTTTTCCGTCGCGATGGCGTGATTAATGATCTAATTTACTTTA
CGAGGATCTCTTAAAGGAGATCTAATCTTAGAATCTGTGCAATTGCATGC
TATTTGCTCATGCTATTTgctcaaaagaagaaaatagttataatttgttt
ttatgaaaaacgtTAGAGTATTAAATTTTCAATCCTTCGACAATTCTTTT
ACTCGAGCAAAAAGGGGAGCACACAGTCACATACTCAAACAAGAACACAT
AAGAAAAAGGTTGTCGAATAACGTGTATTTTTATATCTATTTTATAGGTG
CGCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTC
CCTGAAAAATATGCTTCACCAGTACCACGTGAGTAACACACACCCTTTCC
CACTCTTTTTCATTGTTGTTGTCTTGTCCAAATTATATCTCAGTTTGCAA
AAGAGTGCTCAACCACATTAAAAGTTGATTACTGCAATGTAGAAAAAATT
ATCATGTACTAAAAACACGAATCTTATGGAATAGGGTAATAGACCCATAG
ATCTGtaaaggccgctacccactcagcattttatggtcgtcgaacaaggc
gcacggcttaattattgcataaattacataatTCAAGCCTTCAAAGGCGT
TCGTTTTGAGCgcaacaagagttgaaactttttaacttttttcgcgAAGC
TGAACGTGTGCAAAAGATGTGTATCATgtgcaaaaagatgataaacacaa
aagaagagagaaaaacatGTGCTGCAGAGTGGAATGAGAAAAGCGTACAG
CGACCAAAGCGCCCGAGCCGTGCGTCTTGTTCGCCGAACATAAAATGCTG
AGTCGGTAGCGGCcttaaaacccgaagggctgGATGTCAGGTTTTAAGCC
CTCgtaggaaaaaaaattgaatattggaaaaaattttgttgccattgttt
ttgaaagcccgtgaagcttctgattggtcaagcgctgaaattcgattgta
atatcacgtgacttaggtaggatttcctacctagccTCAGCACACTTTTC
AGTAAAAGCCCGACATCTAGTCCTTCGGGTTTTACAAATCtatgaataga
ccttttcataaattacgttatgAATAGCACTTGCCATGGTGCCATAGTGA
TTAActtccattggattttaataaaactactttctattcataaaaaaatc
atttaatctcTCAAAAGACATAACCACCATGGTAATCGTTTGAATACgag
acaagtgatgttcgtgacgtaacttatgaaaaggtctattggtcgTTATC
TCTTGGGAATTTAAACGACCATTTTCGTTCATTTTCTAGATACGTCACGC
CGGCAGTCACCCAATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGA
AGACCGTATGTTGAAAGATATCGGAAGTCATCAATACTTAGAATACGGAA
AACATGACGGTCATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTC
ATTAAAAATGATCGGACACCAGTCTTAGATATCGAAACACCAGTGAGTAT
GAATCATTAACCATACCCCTGTCtatcacagccccggtggaatttttttt
tgtcagtggggataaaaattcctatttaaatcccaatggggatagaaatt
gcTTTGTTCCAAGgataaaaaattcagtggcgatggttttgaagtgcaat
ttttgcCACTCACCGCAGCTCACCGCATCAATTCACTTGAGTtacaagcc
gaaggctagagagGGATCTTTAAGTTGAAAATTGTCTTTTCATCCCCTTC
TTAGGCATTAAAGATTTTACGTTGCAAGGAGTTCTTTCCATACATCATAT
TTGTTTCGTCTCCAATCTCATACCCTGAAAGCGGTGATCCAAAGATGGTA
AGTACAATAGCCAAACCTCTCACTTCGATCAATAGCTAAAAAAGAGCTAC
TTCAAAGCAGCTGTGAACCTTTTAATTTTAAACAGatacgaaaaatatca
aaagcacggatttgaaatcagcgagttcgaatattttttgaatcagaaga
aaaaatcttctttttttcatctgcatttttctccttattttttcaacgtt
ttgaaaaaaaaacctttatttttttcaaggtttctCAGAAGAAGTCATCC
CTTAAGATTTCTGCTGCATttcaaatgacagattgaatccaGCACTTCTA
TGCTTTCTCATTTCCCATTTTTTGAATAATGGCGGTAAATTTTACTCCCA
ATATCCAgtgtttttgtatgaaaaacaGGCTGGTCGTGATGTAGGAAAAA
ATTGACCCTAAATCCTACAGAAAATTCTATCCTAACCTTCGGCTGTTCCT
TTATGGTCAATACTTTAAAGGTGTTGTTTTTAAAtgagagtgatatcgtt
tgcttactcgtcaattttaattcacaagctttttcacattggattgccac
ggatgtggagcaagactgatatgaaatgggaacacttttatttaaaaata
aaacctttaaggtgATTCAATATAAATctggctgctggcatccactagca
gattcgtgctccttatacacGGTTTTGTGAAGGTCTCCAATTCAGACTAA
cgtaaatcattttcttttatagGATGCTAGTCTACAACGCCTCATTGCAG
ATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGTC
ATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAGA
AGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGAA
AGGTGCACGTATAACTCGCGTAACCATTTAGTTGTGGAGTGCTAGAAGGA
ATTGGGTGTTGTACGCACGTCGTACGTCGCCTGTATACGCGTCACGTCGT
GAGTGACTTCGCTTTACTGcgaaaagatttaaaatgtggtgataataata
acaataatatttGGACAGATGCCACAACTGAAATTGTATTCCTGGTGTGG
TTAAATATAGTGACTTTTCTTTGCATATCAGATATAACTCCGCCAGGATG
TTTGAAATTTATTAACAAGCGTAGTTATAGAAGTCATATTCAGTTTGGTC
TAGTCAATATGATTTCTGACTAGGTATCTGAAAACTAAGTGGGAAATCAA
TTTAAGAATTTAAGAATGACATTTGTCTCACTACATGTCTATGAACGATG
AACGATCTTCTGTTCGCCAGCTATGGAAACGAAcctaccgtattacttcg
aataaacgcccccttcttttaaacgcccccctcgaataaacgtccccttt
tttcaaaaattatttaataaacgcccccctcgaataaacgcccccccccc
ttagagGGGGCGTTAATTCGAAACACGATTATTTTGACGTAGTGGGATAG
AATAATACAACGAAACAacatttatatttgtttatttttccttctcgttt
tttttcttctcaatttttatttttttatatactggaaactttctatacaa
tcctttttttctaaatttcaattcaagtgtagaaaatttttgtaataaac
gccccctcttttt

Coding sequence (CDS) from alignment at sc0000078_pilon:691053..698765+

>MSTRG.10990.3.p1 ID=MSTRG.10990.3.p1|Name=MSTRG.10990.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=11550bp|location=Sequence derived from alignment at sc0000078_pilon:691053..698765+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA
ATGTGTTCTGTTGAACGTCTACAACAGATCTTGCGAGATGCGTCAGGAGA
TGTGACATTCAAAATAgtccctggttgtcaaaatgaaGATCGTGCCAGCA
AAGAGGTctattttaaatgtttatatGATTATGACCCACGTGCAGATGAT
ATGATACCTTGTCAACAAGCTGGTCTTTCATTTCAATGTGGTGACGTTTT
AGAAGTTGTTTGCAAAGCTGACATGCATTGGTGGCAGGCAAGGAAAGTTG
GTACTAAAAATGTTGGGTTGGTTCCATCAACAGAACTTCAAGAACAACGT
ATTCGCAAGATGGTCATTGAAAGAAACAAAGGAGAAGGAGCTATTACATG
TTTATGGCCtaaaaaaaccaacaaaaaatcTAAAGTCAATCGTTACACCG
CTAGGCTTAATACAGCATTCGATAGATTGAACTTGGTCACTTACGAAGAA
GTTatacaacaaaagaaaacataccATAAGACCATAGTTCTCATCGGTGC
GCATGGGGTCGGTCGACGACACATCAAGAATTCTTTAGTATCGCGCTTCC
CTGAAAAATATGCTTCACCAGTACCACATACGTCACGCCGGCAGTCACCC
AATGAAAAGCATGGTGAATTATGGTTCTTTGAGACTGAAGACCGTATGTT
GAAAGATATCGGAAGTCATCAATACTTAGAATACGGAAAACATGACGGTC
ATTTGTATGGAACCAAATTATCTTCTGTTCAAGACCTCATTAAAAATGAT
CGGACACCAGTCTTAGATATCGAAACACCAGCATTAAAGATTTTACGTTG
CAAGGAGTTCTTTCCATACATCATATTTGTTTCGTCTCCAATCTCATACC
CTGAAAGCGGTGATCCAAAGATGGATGCTAGTCTACAACGCCTCATTGCA
GATTCGACCGACCTCAAAAATCGATATCAACATTTTTTCGATTATACTGT
CATTAATGAAACAATTGACGAGACGGTCGAAAAAATAGTCGATCATCTAG
AAGAACTAGCTGGTTCTTCTGCATGGATACCTGCGTCTTGGTATTATTGA

Gene-mRNA-Prot

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
MSTRG.10990	MSTRG.10990	Clytia hemisphaerica_ch_hm2_pilon	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MSTRG.10990.3.p1.exon1	MSTRG.10990.3.p1.exon1	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon2	MSTRG.10990.3.p1.exon2	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon3	MSTRG.10990.3.p1.exon3	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon4	MSTRG.10990.3.p1.exon4	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon5	MSTRG.10990.3.p1.exon5	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon6	MSTRG.10990.3.p1.exon6	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon7	MSTRG.10990.3.p1.exon7	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon8	MSTRG.10990.3.p1.exon8	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon9	MSTRG.10990.3.p1.exon9	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon10	MSTRG.10990.3.p1.exon10	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.10990.3.p1.exon11	MSTRG.10990.3.p1.exon11	Clytia hemisphaerica_ch_hm2_pilon	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MSTRG.10990.3.p1	MSTRG.10990.3.p1-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000078_pilon	genome	sc0000078_pilon:691053..698765 +

You are here

MSTRG.10990.3.p1 (mRNA) -