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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053556 ID=TCONS_00053556|Name=TCONS_00053556|organism=Clytia hemisphaerica|type=transcript|length=6924bp
GTAAGCAAGTCATCGGAAAGACCTTCTTCAAGAGTTAGCTTCCAGTTTGA
CACGAGTATTGATAATCAAAACCAGAGCAACATTTCAAAGATGGGAAATA
TTGTTAATCGAACTCAAAGCCTGACTTCCAAAGATATTTCTTCTCTGATG
AGTTACGATGGTGAAAATACAGAGGCTAATCATCATCCTGTTCAACGACA
GTCTCCTCAAGTCAAACCTAAACGAATACTTCCTTCGACCAACACCAGAC
GGATGTTACCTAAACCAGACTGGAATTTCAATTCACATAGCTTCAGAACA
TCGAATTCTAGGATAGAAGACAACCAAACAAGAATAAAGAAGCCTCAAAG
TTTTGCAGGTGAACCCACAGACCTAGATGGTAAGAGCATTCAAAACATTG
GCGATGCATTGCTATCTTCCGATGAACTAGAATCCATACACTCAACGAAC
GTCGATAATGTTTCGAGCAATGACCAATATCAAGAAAAGGATGATTCAAC
ATTGAAACCACGTGACTTCAAAAAAGGAAACATCAAAATTTCTCGTTCTC
CCGGTTTCAAAAGTCATTCATTCTCAATAGCAAGGCCGGAGACCAAACAA
GAATCCCGCCCAATTGATAATACCGCCCTTTCTAAAATGGGCGTTCATTT
AATCTCATCAGATAGTGACACAGCTAGGTCGAGTCAAACTCAAAAGGAAT
TCAACCAGCAAAGCTTGGATACCAACCAGCGGGCGGTCTCGCCTGCTCAC
TCATTCGTACGTAACCGGACTAGAAGTTTTGATGAATTATTAAGCGGTAC
ACCTCAAGTAAAACACCTTGAATACACTGAATCAACAAGAGAAAACAGCG
CCAAGACAACATCTAAATATAACTCAATGAATATCAATTATGTAGNATAC
ACTGAATCAACAAGGGAAAACAGCGCCAAGACAACATCTAAATATAACTC
AATGAATATCAATTATGTAGCAGTTAAGGAAAATGATGTCGAAATTATGC
AGAATGATTCATCACCCGTGAATAGCATCTCATTCCGTTCTTCATCTTCA
CCGAGTTATGATGAGAAGAAGGTAGGAAGAAATGAAAGTATCAAACTAAA
CGAAAATTTCGCTTCTCTATCTTTGAAACAAGAAGAATCAAGAAACTCCA
AACATCAAAGATCTGTTCTCTTATCCCCGCAAGAGCAGAACAGTGAAGAC
GCAAAGACACGAAGATCTTTCCAGTTATCTCCACAAGAGCAAGACGTCGG
GGACACCAAGAAAGAAGTATCTTCAACAAACACTCATGGAGTAATTAATG
ATCATATCGACGCTGTTAATCAACGTTTAAAACAAAACAGTCGCTGGACG
GACAATCCCAAAACAACATCTAAAACTGGACATACTCACTATAAACAAAG
TAAAAAACGTGCTGTCAATCGAAAGAAAAATCAACACAAACGTGTCACCA
TGGAGTATGGAGAGTATGGCCACGTCATGATGAAAGACAATGATTCTGAA
GGGCGTGCGTCCATAGATGATGGTTATGAGACATCCAGAACCTACGGTAG
CGATCTCACGAACTCGACCGCCAGTGAACTCTACCAATCTACATCTAATG
GATTGAATTTAGAACATGGTACACCATCAACCAATCAGAAGCCTTCATCT
TCAATTTCAACCAATCACAAGGTACAATCTTTGTCAAACTTACATGAAAT
CTTGAATCTGGAGTGTGAAGACGAGCGTAAAAAGCAACATGAAGAGGAAC
AGAGAATACACGTAGCCACCGAGGCCCAGGAAGATTTAGAACAAGGGCGC
AAGGGAATCCATCAAAAGTTGGACAACATGTTAAAAGCGCGCGTCAAGAC
AATGAACGCTTCTGACCGCTCGTTCACCAAACGACAAACAAAGTTCCCAG
ATCCGTTGTTATTAGCCAACGAGCCCCCTTTAATCATTGATAAGGAACCA
TCCTTGCGACTTGAAGAATCAATCGAATCTCTTTCCAAACAGCAGCAAAA
TTCTGATCCGCCATCAATCCCTTACACCTCAAACCAGCAAAGTATTGGCC
ATCAACAAGCTGGTTCTCAACCCTACAGCCAACACACACCAGCAGTTGAA
TTACCTTATACCCAGCAAACAGTAACAGAATTTTCTCAGAATGTGAACCG
ACCAGAAAGATCACACTCTTTGAACCAAAAACCTCCAGTTATGGAATATC
TATCTAACCAACAGCCAATCGATATGAATTTCCAAACCAATCAACAACCT
TCCTTCAATGGGAATCACCAGCGAAACGCCCCAGGAAATCACCAGTCAAT
GATGTCAGGGAATCTTCATCAAAACCAAAATAGTAGTTTCAACTACACCC
AACCACCAACACACGAAGGCTATCAGCAAATGTCGACAGCTTTCTCAGGG
AATCATCNTCCCAGGAAATCACCAGTCAATGCTGTCAGGGAATCTTCATC
AAAACCAAAATAGTAGTTTCAACTACACCCAACCACCAACACACGAAGGC
TATCAGCAAATGTCGACAGCTTTCTCAGGGAATCATCAATCACTGAATTC
AGGAAATCACCAATCAATGGTTCCAGGAAATCACCGATCAATGGTTCCAG
GAAATCACCAATCAATGGTTCCAGGAAATCACCAATCAATGGTTCCAGGA
AATCACCGATCAATGGTTCCAGGAAATCACCAATCAATGGTTCCAGGAAA
TCACCAATCAATGCTTCCGGGGAATCACCACGATAATCCACACATGAATT
TCAACCAAAATCAACAACCAACGAACGAAATCCCAGACGACCTTTACGCA
AAGCCGGACAAAGCAAATCGCCACAGTGAATACACAACGTCAAATCAACA
ACAACCACGTAAAATCGACGCGTCTTACAACACCCCGTCAAGCTCGAATT
ACGTCAGTCTCACGTCGTCGTTCCATTCTACAGCGCCGTTAATGGAGAAG
AAATTATTCCATTTGAGAGATAAAGACACGTCAGAACTTAACAAGAAAGA
ATCGATGCTGAGTGAACTTAAACTTGCGATGTTTAAACGTAGTCGACCAG
CCTCGCCGGAAATCGAAGATACAGACCATCACCCCTATCCGGTCATCAAA
GAAGATTACGGAAACACCCCTCAGCACGATTATCGACAAGAGAATAATTA
TGGAAATTCGTCCGTCAATCATGAACTATATCAACAAAATTCTCAAAGCT
CATACGGAACAAATATGTCTAATGCAGGACAAATTGATCTTTATAACAGC
TTCCCGTTACCTACACACAAGCAAAACGAAGAACTAGCAAACGGCTTCCA
AGCGTACACCAACCAATCCGAATCGGAAGAGAAACTAACCGATGAAAATC
CGATTGACAAAAACCAAGTCATGATGATGTTAAAATCTCACATTAAAGAC
AAAACCGGGTTAAGTTCATTAACCAGAAACAATAAAGATATAAATTTCAG
TCGACCAAAAATCTCAAGTCAAACTTTCTCTCTTATATCTAAAGATATTG
ATTCCGAAATGGTTCAAAATGAATCCCGAAAACTGGAACCCGATTTTTCC
GATCAAACTCCAGAGATTCTGGTTACCGAATTCAGATCACCCGAAGTACA
GCGCTCGAGAGGACTTACGATAAATCACTCAGATGAATTTGAAACTGTCA
ATGTCCGCAACCGCGCCTCAACTTTTACCGAAGCTCAACCAGAGACAGAT
ACAAACACCCAAGCAATTCCTCCCATGGATGAAGTTGATAGCTCACCTAA
GAACAATTCTCACTTGTCCCGAACAGACAGTTTTCAATCGCCTTATTCAA
TCAAATATACTCAAGATGGATCAAGCTTACCTGAGGAAAAACCAAACTTT
GTATCACATGCCTCAGACACTTCTGTTTCTCGTCATGAAAgtttttcttc
catttctgTTGAGCCGCCACAGAGCAGATCTATTTCAAGAGTTGAAAGCA
TGAGATCACTCAAAGAAGAGGCATCTTTATCACGAAATACAAGCTTTTCT
ACTGCTGATGTCATCCAATCACGGTCACGATCGTCTAGCTTCAAATCACA
GATAGACGAAACCCCAATAAGACGTGATAGGAGCTACACTAATGGCTCTA
TTGCAGATTTACCTGAAAGTATAGCTGATGTCTCTAGATCACGCACCGAG
GGATCCATATTAGATCGAAACGATAGTTTCTCGTCAATGCGCGTTGAATA
CCCTGAAAGCAGATCTGTGTCCCGAATTCACAGCTTTTCATCCACTGAAT
ATCAACCCCGAACACGAAGTAATACAGTCTTAGACAGTGCTATCAGATAT
GAAAAAACGAAACAGATTGTTGAAGAACCTCTTGATCTGTCTCTGGATCT
TGATTCAGTCGATCGAGATACAGCCGATCGAGGTACGGCAGCCGTGATAT
CAAATCGGACGCATGAGCCTTTGATTGCACCTGATAGTCGTGGATTGAAT
CTGCGCCAAACCGAGTATTATTTGCCGGAAGAAAACGAGGAGAAAGTCAT
TAAACCGAGCGAATACAAAACCCACCGATTCAACGACCGAAATCGTTCAC
CGAAAATTGAAGTCGGCACCGAGAGTCAACCGACAACTGGTCGTATTCAA
CTCGTAACTGATGGAACAGCTGAATCTAAAAGAATTTCGAATGAGAGAAT
ATCAAGCAATCGTAGTGTACCTTCGGTGGTTGAGAATGAAAGAAAATTGT
CGTTaaccgaactaaagaaaaaacgACAACAAGAACGATTAATGAACTCG
AAACGACTATCTAGTTCCGAGCCATTGTTAGATAAGGTCGGTTCACTGGA
GTTTGCCGACAACATCCAGACATTGACACAACACACTCCTCGGTTATCAA
ATAATGTACGAGTTAACGACACCGTCAGCCGAAAAAAGAAGGTCGAGAAA
TATTCGAGTGAAATTTACACAAATACTAATGTTGGGAGAATTAATATTCC
AGATTCATTCCAGCAAAATAAAGATTCTGAATGGATGATCGACGAACACG
AAAAAAGAAGTGACGAAAGATTCAACGAACGAAAACACAAACGAGAAAAA
GCCGCCTCGAATTCATCCACCCCTAGGGCGTCGAcacccaaaaaatcaaa
aaggcgTTTCAGTCTAACAAATATAGTTAGTGGTGGCTCAACACCACGTT
CCGCCCGCACGGATGTGACAGAATTTTCAAATATGTCAACTTCGCCCCGT
TCTATGCCCGCTACACGCCCAAATAGTCGCCCTAGTTCGCCTAGTCTTGG
GAAAAGAATCAAGAACATCTTCTCGCCAAGAAGTAAacgtaaaaacaaga
aaaacgaTTCCCTTGATGATTCCCAAGATGAGATTGttgatgatgacatc
atcagaCGTTTAAATATGAACGTCAGTTCAAATAACAATGGGACAGTTAC
CGCTTCATCTCTCGGTAGTCTGGTGACGTCCGGATATTCNTAGACGTTTA
AATATGAATGTCAGTTCAAATAATAATGGAACAGTTACAGCTTCATCTCT
CGGTAGTCTGGTGACGTCTGGATATTCGAGTATCCGGTCAGAATCCGGTC
TCAGTATGACAGTTGCGAATGATGAAGATTTTGGTATTGATGACAGTTTC
TTGAGTCACCAAGAATGGTTGAATTCACATGGTGGTAAGGTGACCGTCAC
AAAACGGCCGTCTATCAAACAAGCTATTGTTCCTTTCAACAGCAGCCGAA
ATGTGCAGAATAACGGGTCATGGAAAGTCCGGAAGAACATCGGGAAAGTG
ACTGTTCCGGAAGTATTTTCATCTTCGAGAAAGATTCCAGATAGACAGAA
TGGAGATGCGGAATTCCCTTACAATTCAAAATTCCGTAATTTGAGGTCAT
CACCCGCAATGACCCGGAAATCGAAATCAAAGAAAAGCGGTCTTCAAGCA
CATGATGATGTTGTATTTACAAGTTTCGATGTTGCAGAGTGAATATAGTT
TTAAAGGCTGGAAAATATCGAAACTCGTTGATGTGTGGTGTGTTGAATAG
GATATTCTTAGCAAGATGAACAGAATTATATTATAGATCGATAATATTGA
CTTGATATATTTATTGACTCTAATTGAAATAGCTGTGGAGTTTCTCTTGT
GAGAATTGAATTAGTTCGCTAAGCTCCATTCTTCTCAATCAATATTGTTT
GTCGAATATGGGTACACACGCCCAATCTGATGGATTGTTAAACATTGAAA
CATTATGAATTTGGTGAACAGGTTCCGAAATGATCACGTGGTATTGATAT
TAACTGAAGAACAAAATtgtattgttttgttgtttaaaGGGTAATATAAG
GAAATCTGTATAGATGCCCTAACCATTTATCAACCCGCACTTAGGTGATA
AGCTTGCAGTATCTCAGATTGGACCTTTTGAGCTTTGAATGGATAATGTT
TATGGAATTTGATTAATTAGATGATAAtactttttcttataatttctttt
tgttattgaagttttgcatttttgttAAAGCTAGTTCCCAAAGCACTAGA
TTTGTTAGGTTTAAGTAACATTTTAGCACACCCCTGTGttacagacccgg
taggacccCACCCAACTGGAAAATTAAGCCAAATTTTGTCCCCGTCGGAA
AATACCCTCCAATTTCAGCCCCTCTTGAAAATTGACTTATCaccatttaa
aattcaatggaaaaattgcactctaaaaaACCATCCCAACTGGATTTATT
GAGTCGAGAAGAaactccaccggggctgtgagacaggggtgttataacGT
TAGATCAATACGCCTTGTTTTTCATGAAGAGTGTTTTCTCTTGTTCTAAA
ACCGTTCTATGATCACTCTTTGTTTACCAGACAAGATTTCAAACCAGGta
gttttttaaaaacattttcaacctAATGGTAATACagtattttaaattat
ttaattattaATGTATATTGCTCA Run BLAST on NCBI protein sequence of TCONS_00053556-protein >TCONS_00053556-protein ID=TCONS_00053556-protein|Name=TCONS_00053556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1004bp
MLSGNLHQNQNSSFNYTQPPTHEGYQQMSTAFSGNHQSLNSGNHQSMVPG
NHRSMVPGNHQSMVPGNHQSMVPGNHRSMVPGNHQSMVPGNHQSMLPGNH
HDNPHMNFNQNQQPTNEIPDDLYAKPDKANRHSEYTTSNQQQPRKIDASY
NTPSSSNYVSLTSSFHSTAPLMEKKLFHLRDKDTSELNKKESMLSELKLA
MFKRSRPASPEIEDTDHHPYPVIKEDYGNTPQHDYRQENNYGNSSVNHEL
YQQNSQSSYGTNMSNAGQIDLYNSFPLPTHKQNEELANGFQAYTNQSESE
EKLTDENPIDKNQVMMMLKSHIKDKTGLSSLTRNNKDINFSRPKISSQTF
SLISKDIDSEMVQNESRKLEPDFSDQTPEILVTEFRSPEVQRSRGLTINH
SDEFETVNVRNRASTFTEAQPETDTNTQAIPPMDEVDSSPKNNSHLSRTD
SFQSPYSIKYTQDGSSLPEEKPNFVSHASDTSVSRHESFSSISVEPPQSR
SISRVESMRSLKEEASLSRNTSFSTADVIQSRSRSSSFKSQIDETPIRRD
RSYTNGSIADLPESIADVSRSRTEGSILDRNDSFSSMRVEYPESRSVSRI
HSFSSTEYQPRTRSNTVLDSAIRYEKTKQIVEEPLDLSLDLDSVDRDTAD
RGTAAVISNRTHEPLIAPDSRGLNLRQTEYYLPEENEEKVIKPSEYKTHR
FNDRNRSPKIEVGTESQPTTGRIQLVTDGTAESKRISNERISSNRSVPSV
VENERKLSLTELKKKRQQERLMNSKRLSSSEPLLDKVGSLEFADNIQTLT
QHTPRLSNNVRVNDTVSRKKKVEKYSSEIYTNTNVGRINIPDSFQQNKDS
EWMIDEHEKRSDERFNERKHKREKAASNSSTPRASTPKKSKRRFSLTNIV
SGGSTPRSARTDVTEFSNMSTSPRSMPATRPNSRPSSPSLGKRIKNIFSP
RSKRKNKKNDSLDDSQDEIVDDDIIRRLNMNVSSNNNGTVTASSLGSLVT
SGYX Run BLAST on NCBI transcript from alignment at scaffold_233:487497..497396+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053556 ID=TCONS_00053556|Name=TCONS_00053556|organism=Clytia hemisphaerica|type=transcript|length=9900bp|location=Sequence derived from alignment at scaffold_233:487497..497396+ (Clytia hemisphaerica)
GTAAGCAAGTCATCGGAAAGACCTTCTTCAAGAGTTAGCTTCCAGTTTGA
CACGAGTATTGATAATCAAAACCAGAGCAACATTTCAAAGATGGGAAATA
TTGTTAATCGAACTCAAAGGTGAGTTAGCTTCTCCTTTTATAATATGGAG
ATCTTATTTCatattcttacaaaataaaagtgaggcaaatggagggtacg
ggtGAGTGCCTCCTTAAGGATACTTTTTTGTATATTTCAAATTCTGTTAA
GGCCTAATGGTCGCAAAACTCATAAAACCCCTAAAGATTATGAAAAACga
taaaaacgttttttttttacctaGTTTTTTATTTAAGATATCTGTGAGCT
GCATCAGTTTTTGGTCAATAATGTTAATTTAACGACCATCTAAGGCCTTC
TGGACGCAATATggatgttagatgaacgtttcTTTGACGCCGGTTGTCAT
GATCTTATAGATTCTGATTACGCGCACTGCACGCATTCAATCTAAAGGcc
ataaaatcaaattttccacatccctttagagcaaaGCGTGTTGTGCGATG
AGATTATGATCTTACAAACCACACCTATCTATTGTTTCTAGCCTGACTTC
CAAAGATATTTCTTCTCTGATGAGTTACGATGGTGAAAATACAGAGGCTA
ATCATCATCCTGTTCAACGACAGTCTCCTCAAGTCAAACCTAAACGAATA
CTTCCTTCGACCAACACCAGACGGATGTTACCTAAACCAGACTGGAATTT
CAATTCACATAGCTTCAGAACATCGAATTCTAGGATAGAAGACAACCAAA
CAAGAATAAAGAAGCCTCAAAGTTTTGCAGGtaaatcttgttagatgttt
taaTTTTACGTAAGTATTCCTGTTTCATATCTTCACTTCACTTCACTTCa
cttaagcaaaaaatgtcttCCTTTTCCTCTTCCTGAccgatcttgctcca
cattcgtgtcaatcaaatgtgaaaaagctagtgaattgaaattgatgagt
aaacaaacgataccgctcttatttaaaaacaaaaccttttattgtttttg
aaaattcttggaatagccattcgcgaaagtttatgctcgcgaaaaattct
agacaaaatagaaatttgttaaacttcaaactttgaataaaatgtaacgt
GTATggcactttttaaattttaatctGTTAAAGTCTAATAAGACAAAAGT
TTCAAGCCAATTCAATAAATATTTGTCcctttaagccattttttcatgcc
AAAGATTTTACATAAAGTTGTGTGGATAAATATATGATAGACAAAAATAA
TTATCTCCCTTCCAACATTGTTATTGATATAACATAGAAATAGTACATTT
TTCTTAGGGtgtaaatataaaaattgtacCCTTATCGGCCCTCTATGCAA
CGAtccttagaccatgttcacacgtcactgttccgtttcgctctggtatg
attttcgttacggatcaaGTGTGTTactattggtttcggaacgtttcgga
gcaagaaaacggagcagttccatTCCGATaaaaatagtggagcgaaatcg
tttcgatctgttttgctttgtaacgttaATTTTttacgtttcgaattttg
acgttcacacttgtttcgaaaccgtttcgtttcgtttcggaacggaaccg
taacgtctgaataTGGGCTTAGTCTTACCTCcgatcatagtcattataaa
aaaccctggtctggcaatgtattgttttagctttttgttccaTTTTCCTT
TGTTACGtacaaaagacaagttgcgatttgcatactttttgatcacgttt
ccaaaatctcctcttgggattagtctattttctaatcaaatgatcaaaaa
gcttgcaaaataaatcgattttggtacgtaagctctatcttttaacaata
aaaagagacaaaagccttccagaccagtgtttttataatgactatgctcC
GATAAGGACCGGCTTATAAAAGACCGATAAGGTATTATTGGttaagacac
ccccttctcacagacccgataggattttttcagccagtggggataaaaat
aacggactgaaaatCGATGGAGATTGATATCCCAATATTCTTTATGGCTG
gagatttcatattttttgttttcgagaatgggaaaaatagcataatatta
tgcagtgaggattggtttatttgattattttgaccTTTCGTTTTCCGTTA
CAAGTTCATGGCCATGCCCCAAAAAGATGGTATTTCGCGTTCCAATCTAT
CGcatatttcttttgattttgaataCTCTCCCAGCGAAAACAACATGCCA
AATTATACATGGCTATTATTGTTTGTTCTTCCTTCCCCctgaaattgaat
ttgttttaaaatggtTGCAGTCTCTGTATATTCACTAAGGCCTTTCCAGT
CACGGTCTATAGAAAGCTTTATATCAAGCATTTGTGCCGCCTCTAAATTC
AATAGTTGCACTTTTAATAATTACCAAGAACAGTAAAATCCAAAGCCCTA
TAATAAGTCAGTGCATTTTACCGATCCGCAAAATTACATTTTATGACAAG
GATCTTATGTGTCATATCAAAAATACCAAATTGATCAAAacttaaggggt
ggtacaggagaAGCCCtccccctagttttgaaccgcccctaaaggACTAG
TATGGATAGGGTTAGGTTTtagctacatgtttttttaagcaagtGTATGT
ACCTTGGTCATGCTCGTGTATGCTTCTTTCAAGTTTTTGAAGCACCCAGG
CAAAGCcaatgcttattatatgcttatgaatcatgtttttgattcacccc
gagccaagtttttagtgaaatttcagaaattttgtaaaaatttgttcaga
ttttgggagcagtggtaAGTtcctagccgtggaatgtcttttttttactt
gacctctaccaaatctttttaaacagataaaaaatgacaacttgaaaaat
atttcaggctgacataatgcttaggaattctgcaaatctgagccttcata
tgcttataaatgttATGTATAGGGCCTTGGAAAATCGCTTTTTCTGTCTG
CGAAcgtcatcatcatccttcgattTAGGTCCGAAATAACTTTTGACTTa
ggtcaaaaataaaaattgacctTCAANATCATCATCATTCGATTTAGGTC
CGAAGGGACTTAGgtcgaaaataaaaattgacctTCAAACCACTGTGCTT
GTGATACTCAGTTTCTCACTCTCTAGCCCTGTTCCTTGTTACAAAATATC
AAGAGATTTGTGCTTTCTCTAGCGCTTTGGGTAAAACAACGAAAGAGTCA
TAatgttaaatgtttttttaatctttcGTTTTAGGTGAACCCACAGACCT
AGATGGTAAGAGCATTCAAAACATTGGCGATGCATTGCTATCTTCCGATG
AACTAGAATCCATACACTCAACGAACGTCGATAATGTTTCGAGCAATGAC
CAATATCAAGAAAAGGATGATTCAACATTGAAACCACGTGACTTCAAAAA
AGGAAACATCAAAATTTCTCGTTCTCCCGGTTTCAAAAGTCATTCATTCT
CAATAGCAAGGCCGGAGACCAAACAAGAATCCCGCCCAATTGATAATACC
GCCCTTTCTAAAATGGGCGTTCATTTAATCTCATCAGATAGTGACACAGC
TAGGTCGAGTCAAACTCAAAAGGAATTCAACCAGCAAAGCTTGGATACCA
ACCAGCGGGCGGTCTCGCCTGCTCACTCATTCGTACGTAACCGGACTAGA
AGTTTTGATGAATTATTAAGCGGTACACCTCAAGTAAAACACCTTGAATA
CACTGAATCAACAAGAGAAAACAGCGCCAAGACAACATCTAAATATAACT
CAATGAATATCAATTATGTAGNATACACTGAATCAACAAGGGAAAACAGC
GCCAAGACAACATCTAAATATAACTCAATGAATATCAATTATGTAGCAGT
TAAGGAAAATGATGTCGAAATTATGCAGAATGATTCATCACCCGTGAATA
GCATCTCATTCCGTTCTTCATCTTCACCGAGTTATGATGAGAAGAAGGTA
GGAAGAAATGAAAGTATCAAACTAAACGAAAATTTCGCTTCTCTATCTTT
GAAACAAGAAGAATCAAGAAACTCCAAACATCAAAGATCTGTTCTCTTAT
CCCCGCAAGAGCAGAACAGTGAAGACGCAAAGACACGAAGATCTTTCCAG
TTATCTCCACAAGAGCAAGACGTCGGGGACACCAAGAAAGAAGTATCTTC
AACAAACACTCATGGAGTAATTAATGATCATATCGACGCTGTTAATCAAC
GTTTAAAACAAAACAGTCGCTGGACGGACAATCCCAAAACAACATCTAAA
ACTGGACATACTCACTATAAACAAAGTAAAAAACGTGCTGTCAATCGAAA
GAAAAATCAACACAAACGTGTCACCATGGAGTATGGAGAGTATGGCCACG
TCATGATGAAAGACAATGATTCTGAAGGGCGTGCGTCCATAGATGATGGT
TATGAGACATCCAGAACCTACGGTAGCGATCTCACGAACTCGACCGCCAG
TGAACTCTACCAATCTACATCTAATGGATTGAATTTAGAACATGGTACAC
CATCAACCAATCAGAAGCCTTCATCTTCAATTTCAACCAATCACAAGGTA
CAATCTTTGTCAAACTTACATGAAATCTTGAATCTGGAGTGTGAAGACGA
GCGTAAAAAGCAACATGAAGAGGAACAGAGAATACACGTAGCCACCGAGG
CCCAGGAAGATTTAGAACAAGGGCGCAAGGGAATCCATCAAAAGTTGGAC
AACATGTTAAAAGCGCGCGTCAAGACAATGAACGCTTCTGACCGCTCGTT
CACCAAACGACAAACAAAGTTCCCAGATCCGTTGTTATTAGCCAACGAGC
CCCCTTTAATCATTGATAAGGAACCATCCTTGCGACTTGAAGAATCAATC
GAATCTCTTTCCAAACAGCAGCAAAATTCTGATCCGCCATCAATCCCTTA
CACCTCAAACCAGCAAAGTATTGGCCATCAACAAGCTGGTTCTCAACCCT
ACAGCCAACACACACCAGCAGTTGAATTACCTTATACCCAGCAAACAGTA
ACAGAATTTTCTCAGAATGTGAACCGACCAGAAAGATCACACTCTTTGAA
CCAAAAACCTCCAGTTATGGAATATCTATCTAACCAACAGCCAATCGATA
TGAATTTCCAAACCAATCAACAACCTTCCTTCAATGGGAATCACCAGCGA
AACGCCCCAGGAAATCACCAGTCAATGATGTCAGGGAATCTTCATCAAAA
CCAAAATAGTAGTTTCAACTACACCCAACCACCAACACACGAAGGCTATC
AGCAAATGTCGACAGCTTTCTCAGGGAATCATCNTCCCAGGAAATCACCA
GTCAATGCTGTCAGGGAATCTTCATCAAAACCAAAATAGTAGTTTCAACT
ACACCCAACCACCAACACACGAAGGCTATCAGCAAATGTCGACAGCTTTC
TCAGGGAATCATCAATCACTGAATTCAGGAAATCACCAATCAATGGTTCC
AGGAAATCACCGATCAATGGTTCCAGGAAATCACCAATCAATGGTTCCAG
GAAATCACCAATCAATGGTTCCAGGAAATCACCGATCAATGGTTCCAGGA
AATCACCAATCAATGGTTCCAGGAAATCACCAATCAATGCTTCCGGGGAA
TCACCACGATAATCCACACATGAATTTCAACCAAAATCAACAACCAACGA
ACGAAATCCCAGACGACCTTTACGCAAAGCCGGACAAAGCAAATCGCCAC
AGTGAATACACAACGTCAAATCAACAACAACCACGTAAAATCGACGCGTC
TTACAACACCCCGTCAAGCTCGAATTACGTCAGTCTCACGTCGTCGTTCC
ATTCTACAGCGCCGTTAATGGAGAAGAAATTATTCCATTTGAGAGATAAA
GACACGTCAGAACTTAACAAGAAAGAATCGATGCTGAGTGAACTTAAACT
TGCGATGTTTAAACGTAGTCGACCAGCCTCGCCGGAAATCGAAGATACAG
ACCATCACCCCTATCCGGTCATCAAAGAAGATTACGGAAACACCCCTCAG
CACGATTATCGACAAGAGAATAATTATGGAAATTCGTCCGTCAATCATGA
ACTATATCAACAAAATTCTCAAAGCTCATACGGAACAAATATGTCTAATG
CAGGACAAATTGATCTTTATAACAGCTTCCCGTTACCTACACACAAGCAA
AACGAAGAACTAGCAAACGGCTTCCAAGCGTACACCAACCAATCCGAATC
GGAAGAGAAACTAACCGATGAAAATCCGATTGACAAAAACCAAGTCATGA
TGATGTTAAAATCTCACATTAAAGACAAAACCGGGTTAAGTTCATTAACC
AGAAACAATAAAGATATAAATTTCAGTCGACCAAAAATCTCAAGTCAAAC
TTTCTCTCTTATATCTAAAGATATTGATTCCGAAATGGTTCAAAATGAAT
CCCGAAAACTGGAACCCGATTTTTCCGATCAAACTCCAGAGATTCTGGTT
ACCGAATTCAGATCACCCGAAGTACAGCGCTCGAGAGGACTTACGATAAA
TCACTCAGATGAATTTGAAACTGTCAATGTCCGCAACCGCGCCTCAACTT
TTACCGAAGCTCAACCAGAGACAGATACAAACACCCAAGCAATTCCTCCC
ATGGATGAAGTTGATAGCTCACCTAAGAACAATTCTCACTTGTCCCGAAC
AGACAGTTTTCAATCGCCTTATTCAATCAAATATACTCAAGATGGATCAA
GCTTACCTGAGGAAAAACCAAACTTTGTATCACATGCCTCAGACACTTCT
GTTTCTCGTCATGAAAgtttttcttccatttctgTTGAGCCGCCACAGAG
CAGATCTATTTCAAGAGTTGAAAGCATGAGATCACTCAAAGAAGAGGCAT
CTTTATCACGAAATACAAGCTTTTCTACTGCTGATGTCATCCAATCACGG
TCACGATCGTCTAGCTTCAAATCACAGATAGACGAAACCCCAATAAGACG
TGATAGGAGCTACACTAATGGCTCTATTGCAGATTTACCTGAAAGTATAG
CTGATGTCTCTAGATCACGCACCGAGGGATCCATATTAGATCGAAACGAT
AGTTTCTCGTCAATGCGCGTTGAATACCCTGAAAGCAGATCTGTGTCCCG
AATTCACAGCTTTTCATCCACTGAATATCAACCCCGAACACGAAGTAATA
CAGTCTTAGACAGTGCTATCAGATATGAAAAAACGAAACAGATTGTTGAA
GAACCTCTTGATCTGTCTCTGGATCTTGATTCAGTCGATCGAGATACAGC
CGATCGAGGTACGGCAGCCGTGATATCAAATCGGACGCATGAGCCTTTGA
TTGCACCTGATAGTCGTGGATTGAATCTGCGCCAAACCGAGTATTATTTG
CCGGAAGAAAACGAGGAGAAAGTCATTAAACCGAGCGAATACAAAACCCA
CCGATTCAACGACCGAAATCGTTCACCGAAAATTGAAGTCGGCACCGAGA
GTCAACCGACAACTGGTCGTATTCAACTCGTAACTGATGGAACAGCTGAA
TCTAAAAGAATTTCGAATGAGAGAATATCAAGCAATCGTAGTGTACCTTC
GGTGGTTGAGAATGAAAGAAAATTGTCGTTaaccgaactaaagaaaaaac
gACAACAAGAACGATTAATGAACTCGAAACGACTATCTAGTTCCGAGCCA
TTGTTAGATAAGGTCGGTTCACTGGAGTTTGCCGACAACATCCAGACATT
GACACAACACACTCCTCGGTTATCAAATAATGTACGAGTTAACGACACCG
TCAGCCGAAAAAAGAAGGTCGAGAAATATTCGAGTGAAATTTACACAAAT
ACTAATGTTGGGAGAATTAATATTCCAGATTCATTCCAGCAAAATAAAGA
TTCTGAATGGATGATCGACGAACACGAAAAAAGAAGTGACGAAAGATTCA
ACGAACGAAAACACAAACGAGAAAAAGCCGCCTCGAATTCATCCACCCCT
AGGGCGTCGAcacccaaaaaatcaaaaaggcgTTTCAGTCTAACAAATAT
AGTTAGTGGTGGCTCAACACCACGTTCCGCCCGCACGGATGTGACAGAAT
TTTCAAATATGTCAACTTCGCCCCGTTCTATGCCCGCTACACGCCCAAAT
AGTCGCCCTAGTTCGCCTAGTCTTGGGAAAAGAATCAAGAACATCTTCTC
GCCAAGAAGTAAacgtaaaaacaagaaaaacgaTTCCCTTGATGATTCCC
AAGATGAGATTGttgatgatgacatcatcagaCGTTTAAATATGAACGTC
AGTTCAAATAACAATGGGACAGTTACCGCTTCATCTCTCGGTAGTCTGGT
GACGTCCGGATATTCNTAGACGTTTAAATATGAATGTCAGTTCAAATAAT
AATGGAACAGTTACAGCTTCATCTCTCGGTAGTCTGGTGACGTCTGGATA
TTCGAGTATCCGGTCAGAATCCGGTCTCAGTATGACAGTTGCGAATGATG
AAGATTTTGGTATTGATGACAGTTTCTTGAGTCACCAAGAATGGTTGAAT
TCACATGGTGGTAAGGTGACCGTCACAAAACGGCCGTCTATCAAACAAGC
TATTGTTCCTTTCAACAGCAGCCGAAATGTGCAGAATAACGGGTCATGGA
AAGTCCGGAAGAACATCGGGAAAGTGACTGTTCCGGAAGTATTTTCATCT
TCGAGAAAGATTCCAGATAGACAGAATGGAGATGCGGAATTCCCTTACAA
TTCAAAATTCCGTAATTTGAGGTCATCACCCGCAATGACCCGGAAATCGA
AATCAAAGAAAAGCGGTCTTCAAGCACATGATGATGTTGTATTTACAAGT
TTCGATGTTGCAGAGTGAATATAGTTTTAAAGGCTGGAAAATATCGAAAC
TCGTTGATGTGTGGTGTGTTGAATAGGATATTCTTAGCAAGATGAACAGA
ATTATATTATAGATCGATAATATTGACTTGATATATTTATTGACTCTAAT
TGAAATAGCTGTGGAGTTTCTCTTGTGAGAATTGAATTAGTTCGCTAAGC
TCCATTCTTCTCAATCAATATTGTTTGTCGAATATGGGTACACACGCCCA
ATCTGATGGATTGTTAAACATTGAAACATTATGAATTTGGTGAACAGGTT
CCGAAATGATCACGTGGTATTGATATTAACTGAAGAACAAAATtgtattg
ttttgttgtttaaaGGGTAATATAAGGAAATCTGTATAGATGCCCTAACC
ATTTATCAACCCGCACTTAGGTGATAAGCTTGCAGTATCTCAGATTGGAC
CTTTTGAGCTTTGAATGGATAATGTTTATGGAATTTGATTAATTAGATGA
TAAtactttttcttataatttctttttgttattgaagttttgcatttttg
ttAAAGCTAGTTCCCAAAGCACTAGATTTGTTAGGTTTAAGTAACATTTT
AGCACACCCCTGTGttacagacccggtaggacccCACCCAACTGGAAAAT
TAAGCCAAATTTTGTCCCCGTCGGAAAATACCCTCCAATTTCAGCCCCTC
TTGAAAATTGACTTATCaccatttaaaattcaatggaaaaattgcactct
aaaaaACCATCCCAACTGGATTTATTGAGTCGAGAAGAaactccaccggg
gctgtgagacaggggtgttataacGTTAGATCAATACGCCTTGTTTTTCA
TGAAGAGTGTTTTCTCTTGTTCTAAAACCGTTCTATGATCACTCTTTGTT
TACCAGACAAGATTTCAAACCAGGtagttttttaaaaacattttcaacct
AATGGTAATACagtattttaaattatttaattattaATGTATATTGCTCA
Coding sequence (CDS) from alignment at scaffold_233:487497..497396+ >TCONS_00053556 ID=TCONS_00053556|Name=TCONS_00053556|organism=Clytia hemisphaerica|type=CDS|length=3015bp|location=Sequence derived from alignment at scaffold_233:487497..497396+ (Clytia hemisphaerica)
ATGCTGTCAGGGAATCTTCATCAAAACCAAAATAGTAGTTTCAACTACAC
CCAACCACCAACACACGAAGGCTATCAGCAAATGTCGACAGCTTTCTCAG
GGAATCATCAATCACTGAATTCAGGAAATCACCAATCAATGGTTCCAGGA
AATCACCGATCAATGGTTCCAGGAAATCACCAATCAATGGTTCCAGGAAA
TCACCAATCAATGGTTCCAGGAAATCACCGATCAATGGTTCCAGGAAATC
ACCAATCAATGGTTCCAGGAAATCACCAATCAATGCTTCCGGGGAATCAC
CACGATAATCCACACATGAATTTCAACCAAAATCAACAACCAACGAACGA
AATCCCAGACGACCTTTACGCAAAGCCGGACAAAGCAAATCGCCACAGTG
AATACACAACGTCAAATCAACAACAACCACGTAAAATCGACGCGTCTTAC
AACACCCCGTCAAGCTCGAATTACGTCAGTCTCACGTCGTCGTTCCATTC
TACAGCGCCGTTAATGGAGAAGAAATTATTCCATTTGAGAGATAAAGACA
CGTCAGAACTTAACAAGAAAGAATCGATGCTGAGTGAACTTAAACTTGCG
ATGTTTAAACGTAGTCGACCAGCCTCGCCGGAAATCGAAGATACAGACCA
TCACCCCTATCCGGTCATCAAAGAAGATTACGGAAACACCCCTCAGCACG
ATTATCGACAAGAGAATAATTATGGAAATTCGTCCGTCAATCATGAACTA
TATCAACAAAATTCTCAAAGCTCATACGGAACAAATATGTCTAATGCAGG
ACAAATTGATCTTTATAACAGCTTCCCGTTACCTACACACAAGCAAAACG
AAGAACTAGCAAACGGCTTCCAAGCGTACACCAACCAATCCGAATCGGAA
GAGAAACTAACCGATGAAAATCCGATTGACAAAAACCAAGTCATGATGAT
GTTAAAATCTCACATTAAAGACAAAACCGGGTTAAGTTCATTAACCAGAA
ACAATAAAGATATAAATTTCAGTCGACCAAAAATCTCAAGTCAAACTTTC
TCTCTTATATCTAAAGATATTGATTCCGAAATGGTTCAAAATGAATCCCG
AAAACTGGAACCCGATTTTTCCGATCAAACTCCAGAGATTCTGGTTACCG
AATTCAGATCACCCGAAGTACAGCGCTCGAGAGGACTTACGATAAATCAC
TCAGATGAATTTGAAACTGTCAATGTCCGCAACCGCGCCTCAACTTTTAC
CGAAGCTCAACCAGAGACAGATACAAACACCCAAGCAATTCCTCCCATGG
ATGAAGTTGATAGCTCACCTAAGAACAATTCTCACTTGTCCCGAACAGAC
AGTTTTCAATCGCCTTATTCAATCAAATATACTCAAGATGGATCAAGCTT
ACCTGAGGAAAAACCAAACTTTGTATCACATGCCTCAGACACTTCTGTTT
CTCGTCATGAAAgtttttcttccatttctgTTGAGCCGCCACAGAGCAGA
TCTATTTCAAGAGTTGAAAGCATGAGATCACTCAAAGAAGAGGCATCTTT
ATCACGAAATACAAGCTTTTCTACTGCTGATGTCATCCAATCACGGTCAC
GATCGTCTAGCTTCAAATCACAGATAGACGAAACCCCAATAAGACGTGAT
AGGAGCTACACTAATGGCTCTATTGCAGATTTACCTGAAAGTATAGCTGA
TGTCTCTAGATCACGCACCGAGGGATCCATATTAGATCGAAACGATAGTT
TCTCGTCAATGCGCGTTGAATACCCTGAAAGCAGATCTGTGTCCCGAATT
CACAGCTTTTCATCCACTGAATATCAACCCCGAACACGAAGTAATACAGT
CTTAGACAGTGCTATCAGATATGAAAAAACGAAACAGATTGTTGAAGAAC
CTCTTGATCTGTCTCTGGATCTTGATTCAGTCGATCGAGATACAGCCGAT
CGAGGTACGGCAGCCGTGATATCAAATCGGACGCATGAGCCTTTGATTGC
ACCTGATAGTCGTGGATTGAATCTGCGCCAAACCGAGTATTATTTGCCGG
AAGAAAACGAGGAGAAAGTCATTAAACCGAGCGAATACAAAACCCACCGA
TTCAACGACCGAAATCGTTCACCGAAAATTGAAGTCGGCACCGAGAGTCA
ACCGACAACTGGTCGTATTCAACTCGTAACTGATGGAACAGCTGAATCTA
AAAGAATTTCGAATGAGAGAATATCAAGCAATCGTAGTGTACCTTCGGTG
GTTGAGAATGAAAGAAAATTGTCGTTaaccgaactaaagaaaaaacgACA
ACAAGAACGATTAATGAACTCGAAACGACTATCTAGTTCCGAGCCATTGT
TAGATAAGGTCGGTTCACTGGAGTTTGCCGACAACATCCAGACATTGACA
CAACACACTCCTCGGTTATCAAATAATGTACGAGTTAACGACACCGTCAG
CCGAAAAAAGAAGGTCGAGAAATATTCGAGTGAAATTTACACAAATACTA
ATGTTGGGAGAATTAATATTCCAGATTCATTCCAGCAAAATAAAGATTCT
GAATGGATGATCGACGAACACGAAAAAAGAAGTGACGAAAGATTCAACGA
ACGAAAACACAAACGAGAAAAAGCCGCCTCGAATTCATCCACCCCTAGGG
CGTCGAcacccaaaaaatcaaaaaggcgTTTCAGTCTAACAAATATAGTT
AGTGGTGGCTCAACACCACGTTCCGCCCGCACGGATGTGACAGAATTTTC
AAATATGTCAACTTCGCCCCGTTCTATGCCCGCTACACGCCCAAATAGTC
GCCCTAGTTCGCCTAGTCTTGGGAAAAGAATCAAGAACATCTTCTCGCCA
AGAAGTAAacgtaaaaacaagaaaaacgaTTCCCTTGATGATTCCCAAGA
TGAGATTGttgatgatgacatcatcagaCGTTTAAATATGAACGTCAGTT
CAAATAACAATGGGACAGTTACCGCTTCATCTCTCGGTAGTCTGGTGACG
TCCGGATATTCNTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053556-exon-scaffold_233-1491911889:487497..487615 | TCONS_00053556-exon-scaffold_233-1491911889:487497..487615 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1510915933:487497..487615 | TCONS_00053556-exon-scaffold_233-1510915933:487497..487615 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1575043694:487497..487615 | TCONS_00053556-exon-scaffold_233-1575043694:487497..487615 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1491911889:488088..488326 | TCONS_00053556-exon-scaffold_233-1491911889:488088..488326 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1510915933:488088..488326 | TCONS_00053556-exon-scaffold_233-1510915933:488088..488326 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1575043694:488088..488326 | TCONS_00053556-exon-scaffold_233-1575043694:488088..488326 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1491911889:490831..497396 | TCONS_00053556-exon-scaffold_233-1491911889:490831..497396 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1510915933:490831..497396 | TCONS_00053556-exon-scaffold_233-1510915933:490831..497396 | Clytia hemisphaerica | exon |
| TCONS_00053556-exon-scaffold_233-1575043694:490831..497396 | TCONS_00053556-exon-scaffold_233-1575043694:490831..497396 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:487497..497396 + |
Blast
The following BLAST results are available for this feature:
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