XLOC_033803 (gene) - C. hemisphaerica

Overview
NameXLOC_033803
Unique NameXLOC_033803
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:487497..497396+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033803 ID=XLOC_033803|Name=XLOC_033803|organism=Clytia hemisphaerica|type=gene|length=9900bp|location=Sequence derived from alignment at scaffold_233:487497..497396+ (Clytia hemisphaerica)
GTAAGCAAGTCATCGGAAAGACCTTCTTCAAGAGTTAGCTTCCAGTTTGA CACGAGTATTGATAATCAAAACCAGAGCAACATTTCAAAGATGGGAAATA TTGTTAATCGAACTCAAAGGTGAGTTAGCTTCTCCTTTTATAATATGGAG ATCTTATTTCatattcttacaaaataaaagtgaggcaaatggagggtacg ggtGAGTGCCTCCTTAAGGATACTTTTTTGTATATTTCAAATTCTGTTAA GGCCTAATGGTCGCAAAACTCATAAAACCCCTAAAGATTATGAAAAACga taaaaacgttttttttttacctaGTTTTTTATTTAAGATATCTGTGAGCT GCATCAGTTTTTGGTCAATAATGTTAATTTAACGACCATCTAAGGCCTTC TGGACGCAATATggatgttagatgaacgtttcTTTGACGCCGGTTGTCAT GATCTTATAGATTCTGATTACGCGCACTGCACGCATTCAATCTAAAGGcc ataaaatcaaattttccacatccctttagagcaaaGCGTGTTGTGCGATG AGATTATGATCTTACAAACCACACCTATCTATTGTTTCTAGCCTGACTTC CAAAGATATTTCTTCTCTGATGAGTTACGATGGTGAAAATACAGAGGCTA ATCATCATCCTGTTCAACGACAGTCTCCTCAAGTCAAACCTAAACGAATA CTTCCTTCGACCAACACCAGACGGATGTTACCTAAACCAGACTGGAATTT CAATTCACATAGCTTCAGAACATCGAATTCTAGGATAGAAGACAACCAAA CAAGAATAAAGAAGCCTCAAAGTTTTGCAGGtaaatcttgttagatgttt taaTTTTACGTAAGTATTCCTGTTTCATATCTTCACTTCACTTCACTTCa cttaagcaaaaaatgtcttCCTTTTCCTCTTCCTGAccgatcttgctcca cattcgtgtcaatcaaatgtgaaaaagctagtgaattgaaattgatgagt aaacaaacgataccgctcttatttaaaaacaaaaccttttattgtttttg aaaattcttggaatagccattcgcgaaagtttatgctcgcgaaaaattct agacaaaatagaaatttgttaaacttcaaactttgaataaaatgtaacgt GTATggcactttttaaattttaatctGTTAAAGTCTAATAAGACAAAAGT TTCAAGCCAATTCAATAAATATTTGTCcctttaagccattttttcatgcc AAAGATTTTACATAAAGTTGTGTGGATAAATATATGATAGACAAAAATAA TTATCTCCCTTCCAACATTGTTATTGATATAACATAGAAATAGTACATTT TTCTTAGGGtgtaaatataaaaattgtacCCTTATCGGCCCTCTATGCAA CGAtccttagaccatgttcacacgtcactgttccgtttcgctctggtatg attttcgttacggatcaaGTGTGTTactattggtttcggaacgtttcgga gcaagaaaacggagcagttccatTCCGATaaaaatagtggagcgaaatcg tttcgatctgttttgctttgtaacgttaATTTTttacgtttcgaattttg acgttcacacttgtttcgaaaccgtttcgtttcgtttcggaacggaaccg taacgtctgaataTGGGCTTAGTCTTACCTCcgatcatagtcattataaa aaaccctggtctggcaatgtattgttttagctttttgttccaTTTTCCTT TGTTACGtacaaaagacaagttgcgatttgcatactttttgatcacgttt ccaaaatctcctcttgggattagtctattttctaatcaaatgatcaaaaa gcttgcaaaataaatcgattttggtacgtaagctctatcttttaacaata aaaagagacaaaagccttccagaccagtgtttttataatgactatgctcC GATAAGGACCGGCTTATAAAAGACCGATAAGGTATTATTGGttaagacac ccccttctcacagacccgataggattttttcagccagtggggataaaaat aacggactgaaaatCGATGGAGATTGATATCCCAATATTCTTTATGGCTG gagatttcatattttttgttttcgagaatgggaaaaatagcataatatta tgcagtgaggattggtttatttgattattttgaccTTTCGTTTTCCGTTA CAAGTTCATGGCCATGCCCCAAAAAGATGGTATTTCGCGTTCCAATCTAT CGcatatttcttttgattttgaataCTCTCCCAGCGAAAACAACATGCCA AATTATACATGGCTATTATTGTTTGTTCTTCCTTCCCCctgaaattgaat ttgttttaaaatggtTGCAGTCTCTGTATATTCACTAAGGCCTTTCCAGT CACGGTCTATAGAAAGCTTTATATCAAGCATTTGTGCCGCCTCTAAATTC AATAGTTGCACTTTTAATAATTACCAAGAACAGTAAAATCCAAAGCCCTA TAATAAGTCAGTGCATTTTACCGATCCGCAAAATTACATTTTATGACAAG GATCTTATGTGTCATATCAAAAATACCAAATTGATCAAAacttaaggggt ggtacaggagaAGCCCtccccctagttttgaaccgcccctaaaggACTAG TATGGATAGGGTTAGGTTTtagctacatgtttttttaagcaagtGTATGT ACCTTGGTCATGCTCGTGTATGCTTCTTTCAAGTTTTTGAAGCACCCAGG CAAAGCcaatgcttattatatgcttatgaatcatgtttttgattcacccc gagccaagtttttagtgaaatttcagaaattttgtaaaaatttgttcaga ttttgggagcagtggtaAGTtcctagccgtggaatgtcttttttttactt gacctctaccaaatctttttaaacagataaaaaatgacaacttgaaaaat atttcaggctgacataatgcttaggaattctgcaaatctgagccttcata tgcttataaatgttATGTATAGGGCCTTGGAAAATCGCTTTTTCTGTCTG CGAAcgtcatcatcatccttcgattTAGGTCCGAAATAACTTTTGACTTa ggtcaaaaataaaaattgacctTCAANATCATCATCATTCGATTTAGGTC CGAAGGGACTTAGgtcgaaaataaaaattgacctTCAAACCACTGTGCTT GTGATACTCAGTTTCTCACTCTCTAGCCCTGTTCCTTGTTACAAAATATC AAGAGATTTGTGCTTTCTCTAGCGCTTTGGGTAAAACAACGAAAGAGTCA TAatgttaaatgtttttttaatctttcGTTTTAGGTGAACCCACAGACCT AGATGGTAAGAGCATTCAAAACATTGGCGATGCATTGCTATCTTCCGATG AACTAGAATCCATACACTCAACGAACGTCGATAATGTTTCGAGCAATGAC CAATATCAAGAAAAGGATGATTCAACATTGAAACCACGTGACTTCAAAAA AGGAAACATCAAAATTTCTCGTTCTCCCGGTTTCAAAAGTCATTCATTCT CAATAGCAAGGCCGGAGACCAAACAAGAATCCCGCCCAATTGATAATACC GCCCTTTCTAAAATGGGCGTTCATTTAATCTCATCAGATAGTGACACAGC TAGGTCGAGTCAAACTCAAAAGGAATTCAACCAGCAAAGCTTGGATACCA ACCAGCGGGCGGTCTCGCCTGCTCACTCATTCGTACGTAACCGGACTAGA AGTTTTGATGAATTATTAAGCGGTACACCTCAAGTAAAACACCTTGAATA CACTGAATCAACAAGAGAAAACAGCGCCAAGACAACATCTAAATATAACT CAATGAATATCAATTATGTAGNATACACTGAATCAACAAGGGAAAACAGC GCCAAGACAACATCTAAATATAACTCAATGAATATCAATTATGTAGCAGT TAAGGAAAATGATGTCGAAATTATGCAGAATGATTCATCACCCGTGAATA GCATCTCATTCCGTTCTTCATCTTCACCGAGTTATGATGAGAAGAAGGTA GGAAGAAATGAAAGTATCAAACTAAACGAAAATTTCGCTTCTCTATCTTT GAAACAAGAAGAATCAAGAAACTCCAAACATCAAAGATCTGTTCTCTTAT CCCCGCAAGAGCAGAACAGTGAAGACGCAAAGACACGAAGATCTTTCCAG TTATCTCCACAAGAGCAAGACGTCGGGGACACCAAGAAAGAAGTATCTTC AACAAACACTCATGGAGTAATTAATGATCATATCGACGCTGTTAATCAAC GTTTAAAACAAAACAGTCGCTGGACGGACAATCCCAAAACAACATCTAAA ACTGGACATACTCACTATAAACAAAGTAAAAAACGTGCTGTCAATCGAAA GAAAAATCAACACAAACGTGTCACCATGGAGTATGGAGAGTATGGCCACG TCATGATGAAAGACAATGATTCTGAAGGGCGTGCGTCCATAGATGATGGT TATGAGACATCCAGAACCTACGGTAGCGATCTCACGAACTCGACCGCCAG TGAACTCTACCAATCTACATCTAATGGATTGAATTTAGAACATGGTACAC CATCAACCAATCAGAAGCCTTCATCTTCAATTTCAACCAATCACAAGGTA CAATCTTTGTCAAACTTACATGAAATCTTGAATCTGGAGTGTGAAGACGA GCGTAAAAAGCAACATGAAGAGGAACAGAGAATACACGTAGCCACCGAGG CCCAGGAAGATTTAGAACAAGGGCGCAAGGGAATCCATCAAAAGTTGGAC AACATGTTAAAAGCGCGCGTCAAGACAATGAACGCTTCTGACCGCTCGTT CACCAAACGACAAACAAAGTTCCCAGATCCGTTGTTATTAGCCAACGAGC CCCCTTTAATCATTGATAAGGAACCATCCTTGCGACTTGAAGAATCAATC GAATCTCTTTCCAAACAGCAGCAAAATTCTGATCCGCCATCAATCCCTTA CACCTCAAACCAGCAAAGTATTGGCCATCAACAAGCTGGTTCTCAACCCT ACAGCCAACACACACCAGCAGTTGAATTACCTTATACCCAGCAAACAGTA ACAGAATTTTCTCAGAATGTGAACCGACCAGAAAGATCACACTCTTTGAA CCAAAAACCTCCAGTTATGGAATATCTATCTAACCAACAGCCAATCGATA TGAATTTCCAAACCAATCAACAACCTTCCTTCAATGGGAATCACCAGCGA AACGCCCCAGGAAATCACCAGTCAATGATGTCAGGGAATCTTCATCAAAA CCAAAATAGTAGTTTCAACTACACCCAACCACCAACACACGAAGGCTATC AGCAAATGTCGACAGCTTTCTCAGGGAATCATCNTCCCAGGAAATCACCA GTCAATGCTGTCAGGGAATCTTCATCAAAACCAAAATAGTAGTTTCAACT ACACCCAACCACCAACACACGAAGGCTATCAGCAAATGTCGACAGCTTTC TCAGGGAATCATCAATCACTGAATTCAGGAAATCACCAATCAATGGTTCC AGGAAATCACCGATCAATGGTTCCAGGAAATCACCAATCAATGGTTCCAG GAAATCACCAATCAATGGTTCCAGGAAATCACCGATCAATGGTTCCAGGA AATCACCAATCAATGGTTCCAGGAAATCACCAATCAATGCTTCCGGGGAA TCACCACGATAATCCACACATGAATTTCAACCAAAATCAACAACCAACGA ACGAAATCCCAGACGACCTTTACGCAAAGCCGGACAAAGCAAATCGCCAC AGTGAATACACAACGTCAAATCAACAACAACCACGTAAAATCGACGCGTC TTACAACACCCCGTCAAGCTCGAATTACGTCAGTCTCACGTCGTCGTTCC ATTCTACAGCGCCGTTAATGGAGAAGAAATTATTCCATTTGAGAGATAAA GACACGTCAGAACTTAACAAGAAAGAATCGATGCTGAGTGAACTTAAACT TGCGATGTTTAAACGTAGTCGACCAGCCTCGCCGGAAATCGAAGATACAG ACCATCACCCCTATCCGGTCATCAAAGAAGATTACGGAAACACCCCTCAG CACGATTATCGACAAGAGAATAATTATGGAAATTCGTCCGTCAATCATGA ACTATATCAACAAAATTCTCAAAGCTCATACGGAACAAATATGTCTAATG CAGGACAAATTGATCTTTATAACAGCTTCCCGTTACCTACACACAAGCAA AACGAAGAACTAGCAAACGGCTTCCAAGCGTACACCAACCAATCCGAATC GGAAGAGAAACTAACCGATGAAAATCCGATTGACAAAAACCAAGTCATGA TGATGTTAAAATCTCACATTAAAGACAAAACCGGGTTAAGTTCATTAACC AGAAACAATAAAGATATAAATTTCAGTCGACCAAAAATCTCAAGTCAAAC TTTCTCTCTTATATCTAAAGATATTGATTCCGAAATGGTTCAAAATGAAT CCCGAAAACTGGAACCCGATTTTTCCGATCAAACTCCAGAGATTCTGGTT ACCGAATTCAGATCACCCGAAGTACAGCGCTCGAGAGGACTTACGATAAA TCACTCAGATGAATTTGAAACTGTCAATGTCCGCAACCGCGCCTCAACTT TTACCGAAGCTCAACCAGAGACAGATACAAACACCCAAGCAATTCCTCCC ATGGATGAAGTTGATAGCTCACCTAAGAACAATTCTCACTTGTCCCGAAC AGACAGTTTTCAATCGCCTTATTCAATCAAATATACTCAAGATGGATCAA GCTTACCTGAGGAAAAACCAAACTTTGTATCACATGCCTCAGACACTTCT GTTTCTCGTCATGAAAgtttttcttccatttctgTTGAGCCGCCACAGAG CAGATCTATTTCAAGAGTTGAAAGCATGAGATCACTCAAAGAAGAGGCAT CTTTATCACGAAATACAAGCTTTTCTACTGCTGATGTCATCCAATCACGG TCACGATCGTCTAGCTTCAAATCACAGATAGACGAAACCCCAATAAGACG TGATAGGAGCTACACTAATGGCTCTATTGCAGATTTACCTGAAAGTATAG CTGATGTCTCTAGATCACGCACCGAGGGATCCATATTAGATCGAAACGAT AGTTTCTCGTCAATGCGCGTTGAATACCCTGAAAGCAGATCTGTGTCCCG AATTCACAGCTTTTCATCCACTGAATATCAACCCCGAACACGAAGTAATA CAGTCTTAGACAGTGCTATCAGATATGAAAAAACGAAACAGATTGTTGAA GAACCTCTTGATCTGTCTCTGGATCTTGATTCAGTCGATCGAGATACAGC CGATCGAGGTACGGCAGCCGTGATATCAAATCGGACGCATGAGCCTTTGA TTGCACCTGATAGTCGTGGATTGAATCTGCGCCAAACCGAGTATTATTTG CCGGAAGAAAACGAGGAGAAAGTCATTAAACCGAGCGAATACAAAACCCA CCGATTCAACGACCGAAATCGTTCACCGAAAATTGAAGTCGGCACCGAGA GTCAACCGACAACTGGTCGTATTCAACTCGTAACTGATGGAACAGCTGAA TCTAAAAGAATTTCGAATGAGAGAATATCAAGCAATCGTAGTGTACCTTC GGTGGTTGAGAATGAAAGAAAATTGTCGTTaaccgaactaaagaaaaaac gACAACAAGAACGATTAATGAACTCGAAACGACTATCTAGTTCCGAGCCA TTGTTAGATAAGGTCGGTTCACTGGAGTTTGCCGACAACATCCAGACATT GACACAACACACTCCTCGGTTATCAAATAATGTACGAGTTAACGACACCG TCAGCCGAAAAAAGAAGGTCGAGAAATATTCGAGTGAAATTTACACAAAT ACTAATGTTGGGAGAATTAATATTCCAGATTCATTCCAGCAAAATAAAGA TTCTGAATGGATGATCGACGAACACGAAAAAAGAAGTGACGAAAGATTCA ACGAACGAAAACACAAACGAGAAAAAGCCGCCTCGAATTCATCCACCCCT AGGGCGTCGAcacccaaaaaatcaaaaaggcgTTTCAGTCTAACAAATAT AGTTAGTGGTGGCTCAACACCACGTTCCGCCCGCACGGATGTGACAGAAT TTTCAAATATGTCAACTTCGCCCCGTTCTATGCCCGCTACACGCCCAAAT AGTCGCCCTAGTTCGCCTAGTCTTGGGAAAAGAATCAAGAACATCTTCTC GCCAAGAAGTAAacgtaaaaacaagaaaaacgaTTCCCTTGATGATTCCC AAGATGAGATTGttgatgatgacatcatcagaCGTTTAAATATGAACGTC AGTTCAAATAACAATGGGACAGTTACCGCTTCATCTCTCGGTAGTCTGGT GACGTCCGGATATTCNTAGACGTTTAAATATGAATGTCAGTTCAAATAAT AATGGAACAGTTACAGCTTCATCTCTCGGTAGTCTGGTGACGTCTGGATA TTCGAGTATCCGGTCAGAATCCGGTCTCAGTATGACAGTTGCGAATGATG AAGATTTTGGTATTGATGACAGTTTCTTGAGTCACCAAGAATGGTTGAAT TCACATGGTGGTAAGGTGACCGTCACAAAACGGCCGTCTATCAAACAAGC TATTGTTCCTTTCAACAGCAGCCGAAATGTGCAGAATAACGGGTCATGGA AAGTCCGGAAGAACATCGGGAAAGTGACTGTTCCGGAAGTATTTTCATCT TCGAGAAAGATTCCAGATAGACAGAATGGAGATGCGGAATTCCCTTACAA TTCAAAATTCCGTAATTTGAGGTCATCACCCGCAATGACCCGGAAATCGA AATCAAAGAAAAGCGGTCTTCAAGCACATGATGATGTTGTATTTACAAGT TTCGATGTTGCAGAGTGAATATAGTTTTAAAGGCTGGAAAATATCGAAAC TCGTTGATGTGTGGTGTGTTGAATAGGATATTCTTAGCAAGATGAACAGA ATTATATTATAGATCGATAATATTGACTTGATATATTTATTGACTCTAAT TGAAATAGCTGTGGAGTTTCTCTTGTGAGAATTGAATTAGTTCGCTAAGC TCCATTCTTCTCAATCAATATTGTTTGTCGAATATGGGTACACACGCCCA ATCTGATGGATTGTTAAACATTGAAACATTATGAATTTGGTGAACAGGTT CCGAAATGATCACGTGGTATTGATATTAACTGAAGAACAAAATtgtattg ttttgttgtttaaaGGGTAATATAAGGAAATCTGTATAGATGCCCTAACC ATTTATCAACCCGCACTTAGGTGATAAGCTTGCAGTATCTCAGATTGGAC CTTTTGAGCTTTGAATGGATAATGTTTATGGAATTTGATTAATTAGATGA TAAtactttttcttataatttctttttgttattgaagttttgcatttttg ttAAAGCTAGTTCCCAAAGCACTAGATTTGTTAGGTTTAAGTAACATTTT AGCACACCCCTGTGttacagacccggtaggacccCACCCAACTGGAAAAT TAAGCCAAATTTTGTCCCCGTCGGAAAATACCCTCCAATTTCAGCCCCTC TTGAAAATTGACTTATCaccatttaaaattcaatggaaaaattgcactct aaaaaACCATCCCAACTGGATTTATTGAGTCGAGAAGAaactccaccggg gctgtgagacaggggtgttataacGTTAGATCAATACGCCTTGTTTTTCA TGAAGAGTGTTTTCTCTTGTTCTAAAACCGTTCTATGATCACTCTTTGTT TACCAGACAAGATTTCAAACCAGGtagttttttaaaaacattttcaacct AATGGTAATACagtattttaaattatttaattattaATGTATATTGCTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053556TCONS_00053556Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053556-proteinTCONS_00053556-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:487497..497396 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.01 0 0.33 0.28 0 0.1 0.27 0.42 0.16 0.36 3.71 2.21 0.28 0.25 0.9 0.5 4.72 8.84 2.11 2.17 0.83 0.76 1.74 3.1 0.38 0.15 0.06 0