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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043716 ID=TCONS_00043716|Name=TCONS_00043716|organism=Clytia hemisphaerica|type=transcript|length=1303bp
GTTCAGTGAGTATCTTATCCAGCTTGGCCACTTCTTTTAATCTCAAACAA
TACCAAAATGTTATTGTCAACAAAGTGaacaaaaatgacgtcactctaGA
CATCCttgaaatcatattcaaagacAACTTAGTCACACGTGGTGACTCGT
GGAGACTTCATCGATCATTGATTGGATCATGTATTTATTACAGTCAGAAA
TCCAATTTTCTGGATATGAGAAGTACAGTTAATGAGATGTGGATGAGAGG
CTGTAAAGTGGCTTGTGGTGTGGTCGGTGAAACTACAAAGGTTGTTTACA
GGTCAGCCAGTGCAATGTTCCACATCTTCGTACAAATGAGTGCTGAGATG
TGGGAATGTGACTACACAGGGGAATTGTTCTTCGAGAAAGCCATCATGTA
TTTCTTGAAAGACCTCTTCAACAAGTGgaaagacaaagaaaataatTGCA
ATCATCAAGTggttattgttttgttttcaagaaCATATTATACCGCTAAA
ACTCTAGACGAACTATCACCTGGACTACAAAATGACGTTTTACGAAGTCA
CGATGGTCGATATTATCAAGATTTCTACAAAGTCATTCGGCAATGTGAAA
AACATGATAATTTACAGAACGTTATTTTGGACTTGAAAAGCAGTTTCCAT
GGTTATCCTCTATACGTTGGGTGTCAACAACCGTTCAGTGATGATAAGAC
AAACCCCAAAGGAATTGGTATCAATTCAAGAGCGCACGAAGGGAATTTAC
TTGAAGCTATTAATCTTTCTCTGAATGTATTTGAGAAAGGTTACATCAAT
TGCAACTTAGAAGAGACGAATTGTACGACCCTTATCATTACTCCAACAAG
TGGTGTCTTCGAGGTTGATGAAGAACTCACTGCTTTAACAAGAAACAGGC
TCATCGATAACGGTGTTGGTATCGATCTTGTCTGTCTTGGTGAGCAGCCT
CTCCACGCTGTTCCACTCATCAAATTCTGTTCCAAATCTTCCAAGACGAG
TACCGAAGATACATATAATGTTCCACAGTGGATCAACTTGAGTTATTACT
CTAAACCTGACTCCAAATCTTCTGTATTCGTACCTCGCATGACGGTACCT
GAAAAACCACCTCCTTCTGAAATTTGTaagttgtttttctcttttttatt
ttattatgcTTGATACTTTTACGGCTTAAGGATATCAGTTGATCCTTTAA
AGGTTTGATTTTTACATAAGTCTTCCCGTTTCATACCAGACACATGTTtt
ccttttcctctttctaaccaatcttgctccacatccgtgtcaatccaatg
tga Run BLAST on NCBI protein sequence of TCONS_00043716-protein >TCONS_00043716-protein ID=TCONS_00043716-protein|Name=TCONS_00043716-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
SVSILSSLATSFNLKQYQNVIVNKVNKNDVTLDILEIIFKDNLVTRGDSW
RLHRSLIGSCIYYSQKSNFLDMRSTVNEMWMRGCKVACGVVGETTKVVYR
SASAMFHIFVQMSAEMWECDYTGELFFEKAIMYFLKDLFNKWKDKENNCN
HQVVIVLFSRTYYTAKTLDELSPGLQNDVLRSHDGRYYQDFYKVIRQCEK
HDNLQNVILDLKSSFHGYPLYVGCQQPFSDDKTNPKGIGINSRAHEGNLL
EAINLSLNVFEKGYINCNLEETNCTTLIITPTSGVFEVDEELTALTRNRL
IDNGVGIDLVCLGEQPLHAVPLIKFCSKSSKTSTEDTYNVPQWINLSYYS
KPDSKSSVFVPRMTVPEKPPPSEICKLFFSFLFYYA Run BLAST on NCBI transcript from alignment at sc0004503:249..4661+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043716 ID=TCONS_00043716|Name=TCONS_00043716|organism=Clytia hemisphaerica|type=transcript|length=4413bp|location=Sequence derived from alignment at sc0004503:249..4661+ (Clytia hemisphaerica)
GTTCAGTGAGTATCTTATCCAGCTTGGCCACTTCTTTTAATCTCAAACAA
TACCAAAATGTTATTGTCAACAAAGTGaacaaaaatgacgtcactctaGA
CATCCttgaaatcatattcaaagacAACTTAGTCACACGTGGTGACTCGT
GGAGACTTCATCGATCATTGATTGGATCATGTATTTATTACAGTCAGAAA
TCCAATTTTCTGGATATGAGAAGTACAGTTAATGAGATGTGGATGAGAGG
CTGTAAAGTGGCTTGTGGTGTGGTCGGTGAAACTACAAAGGTATCATTGC
TCAAATTATCATTTTCTTAGGATAGTGCTACGAATGAAAAGAAATTGTTT
ATCTAAGTTCATTGGTTATAActgtaattttatttttaaattttaaatat
taaaaaaaagcccTTTTTTAATCACAATAACTCACCAGGACTATATAAGA
GCTCCGTTTTACGTTTTATCGACAATTAATCAAGTTGTTATTCTGCGCAA
TCAGTCCTAATTCTCCATAATCCTTTTCTTTAATACacccagaaaaaatt
aaaacagaaTAATTACATATTCATATTGTCACACAAATCTTCATAATCTA
CattttatataattttcattGTGTTTTTTATACTCtaatatatttcattt
taaaaaccttaGTATTAGTAATTGGATGTATTTGGAGTATTGTAAGTTGA
TCTTATgttgacacccacccaccctTCTTTAAAACtggaaataaataaaa
gatCGGAATGCTGACTGCTTATAAACGGTCATAGggaaaatgtctttttt
tcaatcagtgaccCCGACCTTTCttttaaagaagggtgtcagaattacaT
GAggaatgtcgacattagaccaacttacgataTGAGTTTTTTATCAAGAC
ATACAGAGGACAAGAGATTTTAATTGAAGGGTCTTTGAACAACTGGGAAT
TTTTAGGTTACAGTTGGTATTTATCAATGTTATTTCTAGGTTGTTTACAG
ATCAGCCAGTGCAATGTTCCACATCCTCCTAGACAAGAGATTTCAATTGA
AGGGTTTTTGACCACTAGGAATTTCTTGTGGTTACAGTTGGTGTTTTTTG
TTATTTCTAGGTTGTTTACAGGTCAGCCAGTGCAATGTTCCACATCTTCG
TACAAATGAGTGCTGAGATGTGGGAATGTGACTACACAGGGGAATTGTTC
TTCGAGAAAGCCATCATGTATTTCTTGAAAGACCTCTTCAACAAGTGgaa
agacaaagaaaataatTGCAATCATCAAGTggttattgttttgttttcaa
gaaCATATTATACCGCTAAAACTCTAGGTATGGATTTCAGTCTAATGTGA
ACTGCGCCTGTTCCCTTCTTATCTTGCActcagatgcagaaattttcatt
cgaaacgctaaagctctaaaggtcggggaaattttcaacatctggaaggt
ttagattacggaactCTACAAGACCGCGTCGAGTATTTTGTAGCGTGAGG
TCTGGTACTctttttcggggattggcgggtccaacagaaatatttttagg
tttacaGACAAGTGCAGTTGAACCTGACTGGGGATGCGGCATATCAAAGG
CCGTCTATCATTGACTATCATATAAATTGGctcgctcctttagagcttta
gcgtgggcggccgccaatccgccatcggaatatcagataagttcCCCTTA
TCCATGGAGATATGTGAGCagaaatattgattttattgtttagtaaattg
gaaaaaattagaaCCAAATTTATGTACATAGCCCTTTTCTTAGTAAAGGT
TTATTCTTCGATTTTTTACTATGATATGAATTTTAGAGTAAAACCTCACt
agaattgaaatatcaaaaacatTGAATGCAAAAGGAATTATCTTAGAAGG
GACACTCCTCTATATTGTCTCCTTTGTATGAAAGCGTAAAGCAACATATG
TACcatttttatttctaattaCAGACGAACTATCACCTGGACTACAAAAT
GACGTTTTACGAAGTCACGATGGTCGATATTATCAAGATTTCTACAAAGT
CATTCGGCAATGTGAAAAACATGATAATTTACAGAACGTTATTTTGGACT
TGAAAAGCAGTTTCCATGGTTATCCTCTATACGTTGGGTGTCAACAACCG
TTCAGTGATGATAAGACAAACCCCAAAGGAATTGGTATCAATTCAAGAGC
GCACGAAGGGAATTTACTTGAAGCTATTAATCTTTCTCTGAATGGTTAGT
AGATCTTTACAGAAagcccccagccgggtcataccagagattttcaaaat
ggtacttgatgcctctctgcttgatgctcagcaattaagagaagaatTAA
Ggttaagtggagcaatccagggagaaagagtggcgccctcccctaccgtc
gggtagatagctatcgaaaaaggagccttcgggtcgcttccgaggtcgca
gacttactttaCTACTTTACAGAAACTTCTACCCAGTACTTCGAttcact
tttttggcatttctGATACattaaagaagaaattttggcgggaagaaaat
ttggtgaATCAATTCGCCagattaagttcccgccaaatttaattttttcc
gtcatccgccaaattaaattcctaccAGATTTAAATTGCTCTATTTATTC
CCacaaatgtgtgctatttcaggctttaaaacaggctttttcctttttta
atggcgttttttgaacaaaaatgcccttcatccgccaaattaaattcccg
ccaaatttaatttttcaagttatcctctaaattaaattccctccgaaaaa
actttttcggaaactttttcggccatccgccaaattaaattcccgccgaa
ataaattcccgccaaaatttcttcctttaatgtagcTCTCACGAAAGATT
ATGCTTAACAAATGTTAGTTAGAATGTTAGTTTTACAGGTTTCCCCTTGA
TGTTTTAATTTAGAAAGCCGCTGGATAGGAGGGTGGGGGGTACGGTACTC
AGAAAAATAGAGTACGAAGACTACATGCCGCTGGTCAGGACTGCATCATC
CACATATCACAAAGTAGGTTTTGGAAAATGTAAAATGTTAAATCTTACAG
GGTCCAAATTTCGTCTGTCAGGGTCTGAATTTTGTCTTCCAGGGTCTGTT
TACGAAAGCTCTCCCTCGAAAGCTCCAACGGTACATCACCATCGGCTGTC
TAGGTCATTACCTGGGACTCGAAATCTAGTCAATTAGAAAAACTTATctt
ttttgtaacatttttctcttttcccCTTGAGGGCCTCATAATATCTATAA
GTGTATAATCGATTTTTTCTCGTAGTATTTGAGAAAGGTTACATCAATTG
CAACTTAGAAGAGACGAATTGTACGACCCTTATCATTACTCCAACAAGTG
GTGTCTTCGAGGTTGATGAAGAACTCACTGCTTTAACAAGAAACAGGCTC
ATCGATAACGgtaaataatactttttttgaAGTATAAGAAATCATTGCAA
ACCTAATTTTAAACAGCCTGTAAtaaactgatctttgttttgatgttttt
acacATGTTAAAAGTATACCGTTTATGTCTAACTAATATTGACAATTCAA
CCTAATTTCCAATGATCTGCGTCTTCAGGCttttattcaaaagaaataCT
CAGTGAAATTCCAGTCATTAGGTCCATTCTGAACTTGACGACATGTTCAT
GTCCATACTGGTTGTGTTTAACCGATTTAAACCTTTTAATCCAATTTACA
TTGATTCTATTGTTGGGGCTTTTATTTAATATATTCACCTACGGTGGCGT
TACGGCGATCTTAGGTCCCTACCGGTGGTATCCAGTCAAAGATGAGTAAG
ACGTCTGATGCCTCTCTGTTTGATGCctagcaactaaagagacgaaTCAA
GGGTAGGTGGAGatatccagggaaaggagtggcgcccccctaccttcggg
tagacagctatacgaaaagggagccttcggggcGCCCTCGACTTACTTAT
ATTTCTTTGTCTTAAACATCAGGTGTTGGTATCGATCTTGTCTGTCTTGG
TGAGCAGCCTCTCCACGCTGTTCCACTCATCAAATTCTGTTCCAAATCTT
CCAAGACGAGTACCGAAGATACATATAATGTTCCACAGTGGATCAACTTG
AGTTATTACTCTAAACCTGACTCCAAATCTTCTGTATTCGTACCTCGCAT
GACGGTACCTGAAAAACCACCTCCTTCTGAAATTTGTaagttgtttttct
cttttttattttattatgcTTGATACTTTTACGGCTTAAGGATATCAGTT
GATCCTTTAAAGGTTTGATTTTTACATAAGTCTTCCCGTTTCATACCAGA
CACATGTTttccttttcctctttctaaccaatcttgctccacatccgtgt
caatccaatgtga Coding sequence (CDS) from alignment at sc0004503:249..4661+ >TCONS_00043716 ID=TCONS_00043716|Name=TCONS_00043716|organism=Clytia hemisphaerica|type=CDS|length=5805bp|location=Sequence derived from alignment at sc0004503:249..4661+ (Clytia hemisphaerica)
TCAGTGAGTATCTTATCCAGCTTGGCCACTTCTTTTAATCTCAAACAATA
CCAAAATGTTATTGTCAACAAAGTGaacaaaaatgacgtcactctaGACA
TCCttgaaatcatattcaaagacAACTTAGTCACACGTGGTGACTCGTGG
AGACTTCATCGATCATTGATTGGATCATGTATTTATTACAGTCAGAAATC
CAATTTTCTGGATATGAGAAGTACAGTTAATGAGATGTGGATGAGAGGCT
GTAAAGTGGCTTGTGGTGTGGTCGGTGAAACTACAAAGGTTGTTTACAGG
TCAGCCAGTGCAATGTTCCACATCTTCGTACAAATGAGTGCTGAGATGTG
GGAATGTGACTACACAGGGGAATTGTTCTTCGAGAAAGCCATCATGTATT
TCTTGAAAGACCTCTTCAACAAGTGgaaagacaaagaaaataatTGCAAT
CATCAAGTggttattgttttgttttcaagaaCATATTATACCGCTAAAAC
TCTAGACGAACTATCACCTGGACTACAAAATGACGTTTTACGAAGTCACG
ATGGTCGATATTATCAAGATTTCTACAAAGTCATTCGGCAATGTGAAAAA
CATGATAATTTACAGAACGTTATTTTGGACTTGAAAAGCAGTTTCCATGG
TTATCCTCTATACGTTGGGTGTCAACAACCGTTCAGTGATGATAAGACAA
ACCCCAAAGGAATTGGTATCAATTCAAGAGCGCACGAAGGGAATTTACTT
GAAGCTATTAATCTTTCTCTGAATGTATTTGAGAAAGGTTACATCAATTG
CAACTTAGAAGAGACGAATTGTACGACCCTTATCATTACTCCAACAAGTG
GTGTCTTCGAGGTTGATGAAGAACTCACTGCTTTAACAAGAAACAGGCTC
ATCGATAACGGTGTTGGTATCGATCTTGTCTGTCTTGGTGAGCAGCCTCT
CCACGCTGTTCCACTCATCAAATTCTGTTCCAAATCTTCCAAGACGAGTA
CCGAAGATACATATAATGTTCCACAGTGGATCAACTTGAGTTATTACTCT
AAACCTGACTCCAAATCTTCTGTATTCGTACCTCGCATGACGGTACCTGA
AAAACCACCTCCTTCTGAAATTTGTaagttgtttttctcttttttatttt
attatgcTTGATCAGTGAGTATCTTATCCAGCTTGGCCACTTCTTTTAAT
CTCAAACAATACCAAAATGTTATTGTCAACAAAGTGaacaaaaatgacgt
cactctaGACATCCttgaaatcatattcaaagacAACTTAGTCACACGTG
GTGACTCGTGGAGACTTCATCGATCATTGATTGGATCATGTATTTATTAC
AGTCAGAAATCCAATTTTCTGGATATGAGAAGTACAGTTAATGAGATGTG
GATGAGAGGCTGTAAAGTGGCTTGTGGTGTGGTCGGTGAAACTACAAAGG
TTGTTTACAGGTCAGCCAGTGCAATGTTCCACATCTTCGTACAAATGAGT
GCTGAGATGTGGGAATGTGACTACACAGGGGAATTGTTCTTCGAGAAAGC
CATCATGTATTTCTTGAAAGACCTCTTCAACAAGTGgaaagacaaagaaa
ataatTGCAATCATCAAGTggttattgttttgttttcaagaaCATATTAT
ACCGCTAAAACTCTAGACGAACTATCACCTGGACTACAAAATGACGTTTT
ACGAAGTCACGATGGTCGATATTATCAAGATTTCTACAAAGTCATTCGGC
AATGTGAAAAACATGATAATTTACAGAACGTTATTTTGGACTTGAAAAGC
AGTTTCCATGGTTATCCTCTATACGTTGGGTGTCAACAACCGTTCAGTGA
TGATAAGACAAACCCCAAAGGAATTGGTATCAATTCAAGAGCGCACGAAG
GGAATTTACTTGAAGCTATTAATCTTTCTCTGAATGTATTTGAGAAAGGT
TACATCAATTGCAACTTAGAAGAGACGAATTGTACGACCCTTATCATTAC
TCCAACAAGTGGTGTCTTCGAGGTTGATGAAGAACTCACTGCTTTAACAA
GAAACAGGCTCATCGATAACGGTGTTGGTATCGATCTTGTCTGTCTTGGT
GAGCAGCCTCTCCACGCTGTTCCACTCATCAAATTCTGTTCCAAATCTTC
CAAGACGAGTACCGAAGATACATATAATGTTCCACAGTGGATCAACTTGA
GTTATTACTCTAAACCTGACTCCAAATCTTCTGTATTCGTACCTCGCATG
ACGGTACCTGAAAAACCACCTCCTTCTGAAATTTGTaagttgtttttctc
ttttttattttattatgcTTGATCAGTGAGTATCTTATCCAGCTTGGCCA
CTTCTTTTAATCTCAAACAATACCAAAATGTTATTGTCAACAAAGTGaac
aaaaatgacgtcactctaGACATCCttgaaatcatattcaaagacAACTT
AGTCACACGTGGTGACTCGTGGAGACTTCATCGATCATTGATTGGATCAT
GTATTTATTACAGTCAGAAATCCAATTTTCTGGATATGAGAAGTACAGTT
AATGAGATGTGGATGAGAGGCTGTAAAGTGGCTTGTGGTGTGGTCGGTGA
AACTACAAAGGTTGTTTACAGGTCAGCCAGTGCAATGTTCCACATCTTCG
TACAAATGAGTGCTGAGATGTGGGAATGTGACTACACAGGGGAATTGTTC
TTCGAGAAAGCCATCATGTATTTCTTGAAAGACCTCTTCAACAAGTGgaa
agacaaagaaaataatTGCAATCATCAAGTggttattgttttgttttcaa
gaaCATATTATACCGCTAAAACTCTAGACGAACTATCACCTGGACTACAA
AATGACGTTTTACGAAGTCACGATGGTCGATATTATCAAGATTTCTACAA
AGTCATTCGGCAATGTGAAAAACATGATAATTTACAGAACGTTATTTTGG
ACTTGAAAAGCAGTTTCCATGGTTATCCTCTATACGTTGGGTGTCAACAA
CCGTTCAGTGATGATAAGACAAACCCCAAAGGAATTGGTATCAATTCAAG
AGCGCACGAAGGGAATTTACTTGAAGCTATTAATCTTTCTCTGAATGTAT
TTGAGAAAGGTTACATCAATTGCAACTTAGAAGAGACGAATTGTACGACC
CTTATCATTACTCCAACAAGTGGTGTCTTCGAGGTTGATGAAGAACTCAC
TGCTTTAACAAGAAACAGGCTCATCGATAACGGTGTTGGTATCGATCTTG
TCTGTCTTGGTGAGCAGCCTCTCCACGCTGTTCCACTCATCAAATTCTGT
TCCAAATCTTCCAAGACGAGTACCGAAGATACATATAATGTTCCACAGTG
GATCAACTTGAGTTATTACTCTAAACCTGACTCCAAATCTTCTGTATTCG
TACCTCGCATGACGGTACCTGAAAAACCACCTCCTTCTGAAATTTGTaag
ttgtttttctcttttttattttattatgcTTGATCAGTGAGTATCTTATC
CAGCTTGGCCACTTCTTTTAATCTCAAACAATACCAAAATGTTATTGTCA
ACAAAGTGaacaaaaatgacgtcactctaGACATCCttgaaatcatattc
aaagacAACTTAGTCACACGTGGTGACTCGTGGAGACTTCATCGATCATT
GATTGGATCATGTATTTATTACAGTCAGAAATCCAATTTTCTGGATATGA
GAAGTACAGTTAATGAGATGTGGATGAGAGGCTGTAAAGTGGCTTGTGGT
GTGGTCGGTGAAACTACAAAGGTTGTTTACAGGTCAGCCAGTGCAATGTT
CCACATCTTCGTACAAATGAGTGCTGAGATGTGGGAATGTGACTACACAG
GGGAATTGTTCTTCGAGAAAGCCATCATGTATTTCTTGAAAGACCTCTTC
AACAAGTGgaaagacaaagaaaataatTGCAATCATCAAGTggttattgt
tttgttttcaagaaCATATTATACCGCTAAAACTCTAGACGAACTATCAC
CTGGACTACAAAATGACGTTTTACGAAGTCACGATGGTCGATATTATCAA
GATTTCTACAAAGTCATTCGGCAATGTGAAAAACATGATAATTTACAGAA
CGTTATTTTGGACTTGAAAAGCAGTTTCCATGGTTATCCTCTATACGTTG
GGTGTCAACAACCGTTCAGTGATGATAAGACAAACCCCAAAGGAATTGGT
ATCAATTCAAGAGCGCACGAAGGGAATTTACTTGAAGCTATTAATCTTTC
TCTGAATGTATTTGAGAAAGGTTACATCAATTGCAACTTAGAAGAGACGA
ATTGTACGACCCTTATCATTACTCCAACAAGTGGTGTCTTCGAGGTTGAT
GAAGAACTCACTGCTTTAACAAGAAACAGGCTCATCGATAACGGTGTTGG
TATCGATCTTGTCTGTCTTGGTGAGCAGCCTCTCCACGCTGTTCCACTCA
TCAAATTCTGTTCCAAATCTTCCAAGACGAGTACCGAAGATACATATAAT
GTTCCACAGTGGATCAACTTGAGTTATTACTCTAAACCTGACTCCAAATC
TTCTGTATTCGTACCTCGCATGACGGTACCTGAAAAACCACCTCCTTCTG
AAATTTGTaagttgtttttctcttttttattttattatgcTTGATCAGTG
AGTATCTTATCCAGCTTGGCCACTTCTTTTAATCTCAAACAATACCAAAA
TGTTATTGTCAACAAAGTGaacaaaaatgacgtcactctaGACATCCttg
aaatcatattcaaagacAACTTAGTCACACGTGGTGACTCGTGGAGACTT
CATCGATCATTGATTGGATCATGTATTTATTACAGTCAGAAATCCAATTT
TCTGGATATGAGAAGTACAGTTAATGAGATGTGGATGAGAGGCTGTAAAG
TGGCTTGTGGTGTGGTCGGTGAAACTACAAAGGTTGTTTACAGGTCAGCC
AGTGCAATGTTCCACATCTTCGTACAAATGAGTGCTGAGATGTGGGAATG
TGACTACACAGGGGAATTGTTCTTCGAGAAAGCCATCATGTATTTCTTGA
AAGACCTCTTCAACAAGTGgaaagacaaagaaaataatTGCAATCATCAA
GTggttattgttttgttttcaagaaCATATTATACCGCTAAAACTCTAGA
CGAACTATCACCTGGACTACAAAATGACGTTTTACGAAGTCACGATGGTC
GATATTATCAAGATTTCTACAAAGTCATTCGGCAATGTGAAAAACATGAT
AATTTACAGAACGTTATTTTGGACTTGAAAAGCAGTTTCCATGGTTATCC
TCTATACGTTGGGTGTCAACAACCGTTCAGTGATGATAAGACAAACCCCA
AAGGAATTGGTATCAATTCAAGAGCGCACGAAGGGAATTTACTTGAAGCT
ATTAATCTTTCTCTGAATGTATTTGAGAAAGGTTACATCAATTGCAACTT
AGAAGAGACGAATTGTACGACCCTTATCATTACTCCAACAAGTGGTGTCT
TCGAGGTTGATGAAGAACTCACTGCTTTAACAAGAAACAGGCTCATCGAT
AACGGTGTTGGTATCGATCTTGTCTGTCTTGGTGAGCAGCCTCTCCACGC
TGTTCCACTCATCAAATTCTGTTCCAAATCTTCCAAGACGAGTACCGAAG
ATACATATAATGTTCCACAGTGGATCAACTTGAGTTATTACTCTAAACCT
GACTCCAAATCTTCTGTATTCGTACCTCGCATGACGGTACCTGAAAAACC
ACCTCCTTCTGAAATTTGTaagttgtttttctcttttttattttattatg
cTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043716-exon-sc0004503-1491911889:249..538 | TCONS_00043716-exon-sc0004503-1491911889:249..538 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1510915933:249..538 | TCONS_00043716-exon-sc0004503-1510915933:249..538 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1575043694:249..538 | TCONS_00043716-exon-sc0004503-1575043694:249..538 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1491911889:1359..1575 | TCONS_00043716-exon-sc0004503-1491911889:1359..1575 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1510915933:1359..1575 | TCONS_00043716-exon-sc0004503-1510915933:1359..1575 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1575043694:1359..1575 | TCONS_00043716-exon-sc0004503-1575043694:1359..1575 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1491911889:2223..2492 | TCONS_00043716-exon-sc0004503-1491911889:2223..2492 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1510915933:2223..2492 | TCONS_00043716-exon-sc0004503-1510915933:2223..2492 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1575043694:2223..2492 | TCONS_00043716-exon-sc0004503-1575043694:2223..2492 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1491911889:3574..3708 | TCONS_00043716-exon-sc0004503-1491911889:3574..3708 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1510915933:3574..3708 | TCONS_00043716-exon-sc0004503-1510915933:3574..3708 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1575043694:3574..3708 | TCONS_00043716-exon-sc0004503-1575043694:3574..3708 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1491911889:4271..4661 | TCONS_00043716-exon-sc0004503-1491911889:4271..4661 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1510915933:4271..4661 | TCONS_00043716-exon-sc0004503-1510915933:4271..4661 | Clytia hemisphaerica | exon |
| TCONS_00043716-exon-sc0004503-1575043694:4271..4661 | TCONS_00043716-exon-sc0004503-1575043694:4271..4661 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004503 | supercontig | sc0004503:249..4661 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027244 | IML1 |
Blast
BLAST of TCONS_00043716 vs. Swiss-Prot (Human)
Match: DEPD5 (GATOR complex protein DEPDC5 OS=Homo sapiens GN=DEPDC5 PE=1 SV=2) HSP 1 Score: 346.28 bits (887), Expect = 2.777e-106 Identity = 179/382 (46.86%), Postives = 255/382 (66.75%), Query Frame = 3
Query: 3 SVSILSSLATSFNLKQYQXXXXXXXXXXXXTLDILEIIFKDNLVTRGDSWRLHRSLIGSCIYYSQKSNFLDMRSTVNEMWMRGCKVACGVVGETTKVVYRSASAMFHIFVQMSAEMWECDYTGELFFEKAIMYFLKDLFNKWKDKENNCNHQVVIVLFSRTYYTAKTLDELSPGLQNDVLRSHDGRYYQDFYKVIRQCEKHDNLQNVILDLKSSFHGYPLYVGCQQPFSDDKTNPKGIGINSRAHEGNLLEAINLSLNVFEKGYINCNLEETNCTTLIITPTSGVFEVDEELTALTRNRLIDNGVGIDLVCLGEQPLHAVPLIKFCSKSSKTSTE--DTYNVPQWINLSYYSKPDSKSSV----FVPRMTVPEKPPPSEICK 1130
++S+ ++ F L+ YQ+V VN V+ DVTLD++E+ FKD + RGD WRL +SL+ +C Y +QK F +R+ E+W++ KV CG + E T+VV+RS SAM +IF+QMS EMW+ D G+L+FEKA+ FL DLF KWK+K NC+H+V +VLFSRT+Y AK++DE + + + H GR+Y+DFYKV+ Q E+ + ++++ +K F YP+ V +Q + P+ G NS + +GN LEAINLS NVF+K YIN N + T +++ITP GVFEVD L LT+ R+IDNG+G+DLVC+GEQPLHAVPL K ++S+ + D YN+P WIN S+Y+ SKS + F PR+ + K P SE K
Sbjct: 66 TISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSLVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCEMWDFDIYGDLYFEKAVNGFLADLFTKWKEK--NCSHEVTVVLFSRTFYDAKSVDEFPEINRASIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQA----EGFPQ--GDNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSRLGDDYNIPHWINHSFYT---SKSQLFCNSFTPRIKLAGKKPASEKAK 436
The following BLAST results are available for this feature:
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