TCONS_00043716-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00043716-protein
Unique Name	TCONS_00043716-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	386

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00043716-protein ID=TCONS_00043716-protein|Name=TCONS_00043716-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
SVSILSSLATSFNLKQYQNVIVNKVNKNDVTLDILEIIFKDNLVTRGDSW
RLHRSLIGSCIYYSQKSNFLDMRSTVNEMWMRGCKVACGVVGETTKVVYR
SASAMFHIFVQMSAEMWECDYTGELFFEKAIMYFLKDLFNKWKDKENNCN
HQVVIVLFSRTYYTAKTLDELSPGLQNDVLRSHDGRYYQDFYKVIRQCEK
HDNLQNVILDLKSSFHGYPLYVGCQQPFSDDKTNPKGIGINSRAHEGNLL
EAINLSLNVFEKGYINCNLEETNCTTLIITPTSGVFEVDEELTALTRNRL
IDNGVGIDLVCLGEQPLHAVPLIKFCSKSSKTSTEDTYNVPQWINLSYYS
KPDSKSSVFVPRMTVPEKPPPSEICKLFFSFLFYYA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_027399	XLOC_027399	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00043716	TCONS_00043716	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027244	IML1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027244	Vacuolar membrane-associated protein Iml1	PFAM	PF12257	IML1	coord: 36..325 e-value: 5.4E-94 score: 314.4

Blast

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BLAST of TCONS_00043716-protein vs. Swiss-Prot (Human)
Match: DEPD5 (GATOR complex protein DEPDC5 OS=Homo sapiens GN=DEPDC5 PE=1 SV=2)

HSP 1 Score: 360.918 bits (925), Expect = 6.679e-113
Identity = 179/382 (46.86%), Postives = 255/382 (66.75%), Query Frame = 0

Query:    1 SVSILSSLATSFNLKQYQNVIVNKVNKNDVTLDILEIIFKDNLVTRGDSWRLHRSLIGSCIYYSQKSNFLDMRSTVNEMWMRGCKVACGVVGETTKVVYRSASAMFHIFVQMSAEMWECDYTGELFFEKAIMYFLKDLFNKWKDKENNCNHQVVIVLFSRTYYTAKTLDELSPGLQNDVLRSHDGRYYQDFYKVIRQCEKHDNLQNVILDLKSSFHGYPLYVGCQQPFSDDKTNPKGIGINSRAHEGNLLEAINLSLNVFEKGYINCNLEETNCTTLIITPTSGVFEVDEELTALTRNRLIDNGVGIDLVCLGEQPLHAVPLIKFCSKSSKTSTE--DTYNVPQWINLSYYSKPDSKSSV----FVPRMTVPEKPPPSEICK 376
            ++S+  ++   F L+ YQ+V VN V+  DVTLD++E+ FKD  + RGD WRL +SL+ +C Y +QK  F  +R+   E+W++  KV CG + E T+VV+RS SAM +IF+QMS EMW+ D  G+L+FEKA+  FL DLF KWK+K  NC+H+V +VLFSRT+Y AK++DE     +  + + H GR+Y+DFYKV+ Q E+ +   ++++ +K  F  YP+ V  +Q     +  P+  G NS + +GN LEAINLS NVF+K YIN N + T   +++ITP  GVFEVD  L  LT+ R+IDNG+G+DLVC+GEQPLHAVPL K  ++S+   +   D YN+P WIN S+Y+   SKS +    F PR+ +  K P SE  K
Sbjct:   66 TISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSLVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCEMWDFDIYGDLYFEKAVNGFLADLFTKWKEK--NCSHEVTVVLFSRTFYDAKSVDEFPEINRASIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQA----EGFPQ--GDNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSRLGDDYNIPHWINHSFYT---SKSQLFCNSFTPRIKLAGKKPASEKAK 436

The following BLAST results are available for this feature:

BLAST of TCONS_00043716-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00043716-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DEPD5	6.679e-113	46.86	GATOR complex protein DEPDC5 OS=Homo sapiens GN=DE...	[more]

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TCONS_00043716-protein (polypeptide) - C. hemisphaerica