TCONS_00042323 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042323
Unique NameTCONS_00042323
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1594

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042323 ID=TCONS_00042323|Name=TCONS_00042323|organism=Clytia hemisphaerica|type=transcript|length=1594bp
TTAGAgatcttaaaatgaaaaaaacaactttaaatCCCAATTAAATCAGG
AGAAAATATCAAATACACAGTTTTGACTGCTCAAGAAATTTATATTCAGT
TATATTATGGATTCTGAAACTATTCAAGaTTGAATTGGTTGGAAACTTCG
ATTGAACATTTTGGTTTATGCCAGGGAGtcttttttccatttaaataaat
ttcaaattatcgTTAGCGCTATTACTGTGCTCATCTTGTATACTGTATTA
AAAGAATATTATTAAGCTCTTCAGAATGAAGCAATCAGCCAATCAATACT
TCTCTCGAAATGCTTGGAGGCTGCCTCTTTGGATATGCTCtatcaaaaaa
taataagtgacAGCATCACTGATCTCCAATCTCAGACCCCTCCACTTATA
CTATGTGAAAGGAAATTGCTGACTTTATCTAGTCATGTTGGGTGTACGGA
TGGTATTCTGTATGCAATGCCTTTGATAGCAGAAATTAATGGTGAAAGAC
ATTTATACATTAGGTGTTTTGAGTCGGGTGTGTACAAAGGCTACTTTGAT
CAAACTGAAATGTTTGGTGAACTCATGGATCAGTATGAAATCACCAAGAA
GTTTGTCATCAGGATATACACAGAGTGGGATGTTCTTGCTGTTTATCACA
CTGAACGAAACAAACATAAAAAGgGGACTAAGCATTCAACAACATTTAAA
AGGCTCACAACACTCGATAAACATTCAATCGATAAAACCATTAAATCAGC
ACACGACTCTTTAAAGGAAACATTTAAAAGTTTTGCACCtggttttgtat
tttattgccGTAGAGACATGTCTCATACAAATCGAAATACTGATCCCAAA
GATAACCAATTTTACTTGATTGAGGGTCTTGGTGCATCCGAACTCTGGTT
TAGAAACTTTCAAGATTATGGAACCGAACATCCAAACGACCCATATCCAA
CCGTTCTTGAACAGTTCAaaggaaaagaagaactttCACTGATCGAGCAA
TTCCAAGTTTTATCCCATGTCCCGAATCTTCATTCTTGGGCTTCTGAATC
AAAAAGTGGAACGAAAAAACAAcaatattttgcttcaaatgGTTACTCCC
CTCGAGATATCATCTTACGTGCTCTAGATGACATTCATTCTGACATGGAA
GAAAAAGTCTCATCTATAACACCTATCTACTCGCTGATTTTATCCAAACA
ATACCATGTCCCGAAAGTGTCTATCCACAAACAAAATaaaCGGCGTACTT
GCAATCAAACTCACCGGCGAAAAGTATTGGACAAGACGGCTTTGCTAGAG
CATCTTGACCACCCTAATTTTGTTCAACCTGTGTATGAAAAGTTGGATGT
TTACCCAAATTTTCGATACAATATTTTCAATCACGGGACGATCGTTTGGC
GTGAACTATCACAAAACCAACATGTTGTGGTTATGAATGATTACGACTCC
GATAATATTAACGGGAACGTCAAGGTTGGTTTAAACCATTAAATGATATA
CTTTGAAGGCTTAGATAATTTTTttagacgaaaaaaaaaccgatTCGTAA
TTTACAATAGTTGTAAGATGGAAAAAGAAGGTGtcttaaaaaat
Run BLAST on NCBI

protein sequence of TCONS_00042323-protein

>TCONS_00042323-protein ID=TCONS_00042323-protein|Name=TCONS_00042323-protein|organism=Clytia hemisphaerica|type=polypeptide|length=385bp
MLYQKIISDSITDLQSQTPPLILCERKLLTLSSHVGCTDGILYAMPLIAE
INGERHLYIRCFESGVYKGYFDQTEMFGELMDQYEITKKFVIRIYTEWDV
LAVYHTERNKHKKGTKHSTTFKRLTTLDKHSIDKTIKSAHDSLKETFKSF
APGFVFYCRRDMSHTNRNTDPKDNQFYLIEGLGASELWFRNFQDYGTEHP
NDPYPTVLEQFKGKEELSLIEQFQVLSHVPNLHSWASESKSGTKKQQYFA
SNGYSPRDIILRALDDIHSDMEEKVSSITPIYSLILSKQYHVPKVSIHKQ
NKRRTCNQTHRRKVLDKTALLEHLDHPNFVQPVYEKLDVYPNFRYNIFNH
GTIVWRELSQNQHVVVMNDYDSDNINGNVKVGLNH
Run BLAST on NCBI

transcript from alignment at sc0003345:3486..7116-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042323 ID=TCONS_00042323|Name=TCONS_00042323|organism=Clytia hemisphaerica|type=transcript|length=3631bp|location=Sequence derived from alignment at sc0003345:3486..7116- (Clytia hemisphaerica)
TTAGAGATCTTAAAATGAAAAAAACAACTTTAAATCCCAATTAAATCAGG
AGAAAATATCAAATACACAGTTTTGACTGCTCAAGAAATTTATATTCAGT
TATATTATGGATTCTGAAACTATTCAAGGTACAATCTTTTTTTATTTTAT
TTTCAATACGAAAAATATTAATATATCACACAGAATAGAATTATATGTTA
TAAGGAACAAAACTGAACCAATACATGTGACTAATGACATAACAATTGAC
ATACATAAACCTCTCAATTTTTTTACAGATTGAATTGGTTGGAAACTTCG
ATTGAACATTTTGGTTTATGCCAGGGAGTCTTTTTTCCATTTAAATAAAT
TTCAAATTATCGTTAGCGCTATTACTGTGCTCATCTTGTATACTGTATTA
AAAGAATATTATTAAGGTTTGATTCAATTATGGCGTTAACTGTGACAAAC
AAATGAGAACATGACAAATACATATACCAAATAAAAACATAGACCAAATC
TTATTTTTGTTTAAAAGAGACAATGTGACAGAAACAGAACACCTTTCAAT
AATAAGAATTATGTTTGTACTTGTGTTGTTTCTTTTTAAAAATTGATTTA
GAAAATGGTGATTTTTGAAATTTCTGTTAATTTTTAGTATCACAGCCCAT
CAACTCACATATATTTATGTTATTTTGTATTTATGTTATATAATCTTCAT
TTTCATTCCAGCTCTTCAGAATGAAGCAATCAGCCAATCAATACTTCTCT
CGAAATGCTTGGAGGCTGCCTCTTTGGATATGCTCTATCAAAAAATAATA
AGTGACAGCATCACTGATCTCCAATCTCAGACCCCTCCACTTATACTATG
TGAAAGGAAATTGCTGACTTTATCTAGTCATGTTGGGTGTACGGATGGTA
TTCTGTATGCAATGCCTTTGATAGCAGAAATTAATGGTGAAAGACATTTA
TACATTAGGTAAAGAATTTGGCTTCTACTTTAAGTGTTCGCTCTAGGAAT
TATTTCAATCTCTCTTTTCCCATGACACTTTGTATCAACAACTGCTTAAA
ATCGAAATGTTTTATTTTTTAAACTTATTGATTTTATTTGTTTGCATTAA
ATTTCAGGTGTTTTGAGTCGGGTGTGTACAAAGGCTACTTTGATCAAACT
GAAATGTTTGGTGAACTCATGGATCAGTATGAAATCACCAAGAAGTTTGT
CATCAGGATATACACAGAGTGGGATGTTCTTGCTGTTTATCACACTGAAC
GAAACAAACATAAAAAGGGTAAATAATTTTGAAATTTAGTCTTTTTTACC
AATAGTTGTATTTTTGTTATTACTGAACTGAATTTTTGAAATTGTTGCCC
AAACTATATTCTATTATATACTTTTTTATTCAGGGACTAAGCATTCAACA
ACATTTAAAAGGCTCACAACACTCGATAAACATTCAATCGATAAAACCAT
TAAATCAGCACACGACTCTTTAAAGGAAACATTTAAAAGTTTTGCACCTG
GTTTTGTATTTTATTGCCGTAGAGACATGTCTCATACAAATCGAAATACT
GATCCCAAAGATAACCAGTAAGATAATACTTTTCTTTGGTTCTCTACTGT
CTTTTCTATTTGAAGAGAGTATTTTTAGAAACTAAGATTATGTACAAATT
CGCCTCTGTGAAATATTCCACTTTTACATTACAGCTGTTCTTCGAACTCG
AACTCGGAAATCTAATTTGTTGAATTACAGAGAGTTTTTTAAGAGACCTA
GAAAATTCAATAGTATCAGGGATAGAAAGAATTAGGGAAAGTCTAGTTCG
CTAAAAGAAATTTTATTTTATTTCTTATTTTTCACAGATTTTACTTGATT
GAGGGTCTTGGTGCATCCGAACTCTGGTTTAGAAACTTTCAAGATTATGG
AACCGAACATCCAAACGACCCATATCCAACCGTTCTTGAACAGTTCAAAG
GAAAAGAAGAACTTTCACTGATCGAGCAATTCCAAGTTTTATCCCATGTC
CCGAATCTTCATTCTTGGGCTTCTGAATCAAAAAGTGGAACGAAAAAACA
ACAATATTTTGCTTCAAATGGTTACTCCCCTCGAGATATCATCTTACGTG
CTCTAGATGACATTCATTCTGACATGGAAGAAAAAGTCTCATCTATAACA
CCTATCTACTCGCTGATTTTATCCAAACAATACCATGTCCCGAAAGTGTC
TATCCACAAACAAAATGTAAGTGTTAAACTTTTCACGTTATATGATTGAT
AAGATCCATTCATTTTCTAGTCTTCGGAAGACAAATCATAAAAATTTATA
TAATTACTACAAATAAGAAATGAAATTATGATGATTTTTTCCGATAAATT
ATTAATCTCGATATCCTAAATATTTTAAATTTAGAAACGGCGTACTTGCA
ATCAAACTCACCGGCGAAAAGTATTGGACAAGACGGCTTTGCTAGAGCAT
CTTGACCACCCTAATTTTGTTCAACCTGTATATGAAAAGTTGGATGTTTA
CCCAAATTTTCGATACAATATTTTCAACNATGTACAAATTCGCCTCTGTG
AAATATTCCACTTTTACATTACAGCTGTTCTTCGAACTCGAACTCGGAAA
TCTAATTTGTTGAATTACAGACAGTTTTTTAAGAGACCTAGAAAATTCAA
TAGTATCAGGGATAGAAAGAATTAGTGAAATTCTAGTTCGCTAAAAGAAA
TTTTATTTTATTTCTTATTTTTCACAGATTTTACTTGATTGAGGGTCTTG
GTGCATCTGAACTCTGGTTTAGAAACTTTCAAGATTATGGAACCGAACAT
CCAAACGACCCATATCCAACCGTTCTTGAACAGTTCAAAGGAAAAGAAGA
ACTTTCACTGATCGAGCAATTCCAAGTTTTATCCCATGTCCCGAATCTTC
ATTCTTGGGCTTCTGAATCAAAAAGTGGAACGAAAAAACAACAATATTTT
GCTTCAAATGGTTACTCCCCTCGAGATATCATCTTACGTGCTCTAGATGA
CATTCATTCTGACATGGAAGAAAAAGTCTCATCTATAACACCTATCTACT
CGCTGATTTTATCCAAACAATACCATGTCCCGAAAGTGTCTATCCACAAA
CAAAATGTAAGTGTTAAACTTTTCACGTTATATGATTGATAAGATCCATT
CATTTTCTAGTCTTCGGAAGACAAATCATAAAAATTGATATAATTACTAC
AAATAAGAAATGAAATTATGATGATTTTTTCCGATAAATCATTAATCTCG
ATATCCTAAATATTTTAAATTTAGAAACGGCGTACTTGCAATCAAACTCA
CCGGCGAAAAGTATTGGACAAGACGGCTTTGCTAGAGCATCTTGACCACC
CTAATTTTGTTCAACCTGTGTATGAAAAGTTGGATGTTTACCCAAATTTT
CGATACAATATTTTCAATCACGGGACGATCGTTTGGCGTGAACTATCACA
AAACCAACATGTTGTGGTTATGAATGATTACGACTCCGATAATATTAACG
GGAACGTCAAGGTTGGTTTAAACCATTAAATGATATACTTTGAAGGCTTA
GATAATTTTTTTAGACGAAAAAAAAACCGATTCGTAATTTACAATAGTTG
TAAGATGGAAAAAGAAGGTGTCTTAAAAAAT

Coding sequence (CDS) from alignment at sc0003345:3486..7116-

>TCONS_00042323 ID=TCONS_00042323|Name=TCONS_00042323|organism=Clytia hemisphaerica|type=CDS|length=5790bp|location=Sequence derived from alignment at sc0003345:3486..7116- (Clytia hemisphaerica)
AAACGGCGTACTTGCAATCAAACTCACCGGCGAAAAGTATTGGACAAGAC
GGCTTTGCTAGAGCATCTTGACCACCCTAATTTTGTTCAACCTGTGTATG
AAAAGTTGGATGTTTACCCAAATTTTCGATACAATATTTTCAATCACGGG
ACGATCGTTTGGCGTGAACTATCACAAAACCAACATGTTGTGGTTATGAA
TGATTACGACTCCGATAATATTAACGGGAACGTCAAGGTTGGTTTAAACC
ATTAAATTTTACTTGATTGAGGGTCTTGGTGCATCCGAACTCTGGTTTAG
AAACTTTCAAGATTATGGAACCGAACATCCAAACGACCCATATCCAACCG
TTCTTGAACAGTTCAAAGGAAAAGAAGAACTTTCACTGATCGAGCAATTC
CAAGTTTTATCCCATGTCCCGAATCTTCATTCTTGGGCTTCTGAATCAAA
AAGTGGAACGAAAAAACAACAATATTTTGCTTCAAATGGTTACTCCCCTC
GAGATATCATCTTACGTGCTCTAGATGACATTCATTCTGACATGGAAGAA
AAAGTCTCATCTATAACACCTATCTACTCGCTGATTTTATCCAAACAATA
CCATGTCCCGAAAGTGTCTATCCACAAACAAAATGGACTAAGCATTCAAC
AACATTTAAAAGGCTCACAACACTCGATAAACATTCAATCGATAAAACCA
TTAAATCAGCACACGACTCTTTAAAGGAAACATTTAAAAGTTTTGCACCT
GGTTTTGTATTTTATTGCCGTAGAGACATGTCTCATACAAATCGAAATAC
TGATCCCAAAGATAACCAGTGTTTTGAGTCGGGTGTGTACAAAGGCTACT
TTGATCAAACTGAAATGTTTGGTGAACTCATGGATCAGTATGAAATCACC
AAGAAGTTTGTCATCAGGATATACACAGAGTGGGATGTTCTTGCTGTTTA
TCACACTGAACGAAACAAACATAAAAAGGATGCTCTATCAAAAAATAATA
AGTGACAGCATCACTGATCTCCAATCTCAGACCCCTCCACTTATACTATG
TGAAAGGAAATTGCTGACTTTATCTAGTCATGTTGGGTGTACGGATGGTA
TTCTGTATGCAATGCCTTTGATAGCAGAAATTAATGGTGAAAGACATTTA
TACATTAGAAACGGCGTACTTGCAATCAAACTCACCGGCGAAAAGTATTG
GACAAGACGGCTTTGCTAGAGCATCTTGACCACCCTAATTTTGTTCAACC
TGTGTATGAAAAGTTGGATGTTTACCCAAATTTTCGATACAATATTTTCA
ATCACGGGACGATCGTTTGGCGTGAACTATCACAAAACCAACATGTTGTG
GTTATGAATGATTACGACTCCGATAATATTAACGGGAACGTCAAGGTTGG
TTTAAACCATTAAATTTTACTTGATTGAGGGTCTTGGTGCATCCGAACTC
TGGTTTAGAAACTTTCAAGATTATGGAACCGAACATCCAAACGACCCATA
TCCAACCGTTCTTGAACAGTTCAAAGGAAAAGAAGAACTTTCACTGATCG
AGCAATTCCAAGTTTTATCCCATGTCCCGAATCTTCATTCTTGGGCTTCT
GAATCAAAAAGTGGAACGAAAAAACAACAATATTTTGCTTCAAATGGTTA
CTCCCCTCGAGATATCATCTTACGTGCTCTAGATGACATTCATTCTGACA
TGGAAGAAAAAGTCTCATCTATAACACCTATCTACTCGCTGATTTTATCC
AAACAATACCATGTCCCGAAAGTGTCTATCCACAAACAAAATGGACTAAG
CATTCAACAACATTTAAAAGGCTCACAACACTCGATAAACATTCAATCGA
TAAAACCATTAAATCAGCACACGACTCTTTAAAGGAAACATTTAAAAGTT
TTGCACCTGGTTTTGTATTTTATTGCCGTAGAGACATGTCTCATACAAAT
CGAAATACTGATCCCAAAGATAACCAGTGTTTTGAGTCGGGTGTGTACAA
AGGCTACTTTGATCAAACTGAAATGTTTGGTGAACTCATGGATCAGTATG
AAATCACCAAGAAGTTTGTCATCAGGATATACACAGAGTGGGATGTTCTT
GCTGTTTATCACACTGAACGAAACAAACATAAAAAGGATGCTCTATCAAA
AAATAATAAGTGACAGCATCACTGATCTCCAATCTCAGACCCCTCCACTT
ATACTATGTGAAAGGAAATTGCTGACTTTATCTAGTCATGTTGGGTGTAC
GGATGGTATTCTGTATGCAATGCCTTTGATAGCAGAAATTAATGGTGAAA
GACATTTATACATTAGAAACGGCGTACTTGCAATCAAACTCACCGGCGAA
AAGTATTGGACAAGACGGCTTTGCTAGAGCATCTTGACCACCCTAATTTT
GTTCAACCTGTGTATGAAAAGTTGGATGTTTACCCAAATTTTCGATACAA
TATTTTCAATCACGGGACGATCGTTTGGCGTGAACTATCACAAAACCAAC
ATGTTGTGGTTATGAATGATTACGACTCCGATAATATTAACGGGAACGTC
AAGGTTGGTTTAAACCATTAAATTTTACTTGATTGAGGGTCTTGGTGCAT
CCGAACTCTGGTTTAGAAACTTTCAAGATTATGGAACCGAACATCCAAAC
GACCCATATCCAACCGTTCTTGAACAGTTCAAAGGAAAAGAAGAACTTTC
ACTGATCGAGCAATTCCAAGTTTTATCCCATGTCCCGAATCTTCATTCTT
GGGCTTCTGAATCAAAAAGTGGAACGAAAAAACAACAATATTTTGCTTCA
AATGGTTACTCCCCTCGAGATATCATCTTACGTGCTCTAGATGACATTCA
TTCTGACATGGAAGAAAAAGTCTCATCTATAACACCTATCTACTCGCTGA
TTTTATCCAAACAATACCATGTCCCGAAAGTGTCTATCCACAAACAAAAT
GGACTAAGCATTCAACAACATTTAAAAGGCTCACAACACTCGATAAACAT
TCAATCGATAAAACCATTAAATCAGCACACGACTCTTTAAAGGAAACATT
TAAAAGTTTTGCACCTGGTTTTGTATTTTATTGCCGTAGAGACATGTCTC
ATACAAATCGAAATACTGATCCCAAAGATAACCAGTGTTTTGAGTCGGGT
GTGTACAAAGGCTACTTTGATCAAACTGAAATGTTTGGTGAACTCATGGA
TCAGTATGAAATCACCAAGAAGTTTGTCATCAGGATATACACAGAGTGGG
ATGTTCTTGCTGTTTATCACACTGAACGAAACAAACATAAAAAGGATGCT
CTATCAAAAAATAATAAGTGACAGCATCACTGATCTCCAATCTCAGACCC
CTCCACTTATACTATGTGAAAGGAAATTGCTGACTTTATCTAGTCATGTT
GGGTGTACGGATGGTATTCTGTATGCAATGCCTTTGATAGCAGAAATTAA
TGGTGAAAGACATTTATACATTAGAAACGGCGTACTTGCAATCAAACTCA
CCGGCGAAAAGTATTGGACAAGACGGCTTTGCTAGAGCATCTTGACCACC
CTAATTTTGTTCAACCTGTGTATGAAAAGTTGGATGTTTACCCAAATTTT
CGATACAATATTTTCAATCACGGGACGATCGTTTGGCGTGAACTATCACA
AAACCAACATGTTGTGGTTATGAATGATTACGACTCCGATAATATTAACG
GGAACGTCAAGGTTGGTTTAAACCATTAAATTTTACTTGATTGAGGGTCT
TGGTGCATCCGAACTCTGGTTTAGAAACTTTCAAGATTATGGAACCGAAC
ATCCAAACGACCCATATCCAACCGTTCTTGAACAGTTCAAAGGAAAAGAA
GAACTTTCACTGATCGAGCAATTCCAAGTTTTATCCCATGTCCCGAATCT
TCATTCTTGGGCTTCTGAATCAAAAAGTGGAACGAAAAAACAACAATATT
TTGCTTCAAATGGTTACTCCCCTCGAGATATCATCTTACGTGCTCTAGAT
GACATTCATTCTGACATGGAAGAAAAAGTCTCATCTATAACACCTATCTA
CTCGCTGATTTTATCCAAACAATACCATGTCCCGAAAGTGTCTATCCACA
AACAAAATGGACTAAGCATTCAACAACATTTAAAAGGCTCACAACACTCG
ATAAACATTCAATCGATAAAACCATTAAATCAGCACACGACTCTTTAAAG
GAAACATTTAAAAGTTTTGCACCTGGTTTTGTATTTTATTGCCGTAGAGA
CATGTCTCATACAAATCGAAATACTGATCCCAAAGATAACCAGTGTTTTG
AGTCGGGTGTGTACAAAGGCTACTTTGATCAAACTGAAATGTTTGGTGAA
CTCATGGATCAGTATGAAATCACCAAGAAGTTTGTCATCAGGATATACAC
AGAGTGGGATGTTCTTGCTGTTTATCACACTGAACGAAACAAACATAAAA
AGGATGCTCTATCAAAAAATAATAAGTGACAGCATCACTGATCTCCAATC
TCAGACCCCTCCACTTATACTATGTGAAAGGAAATTGCTGACTTTATCTA
GTCATGTTGGGTGTACGGATGGTATTCTGTATGCAATGCCTTTGATAGCA
GAAATTAATGGTGAAAGACATTTATACATTAGAAACGGCGTACTTGCAAT
CAAACTCACCGGCGAAAAGTATTGGACAAGACGGCTTTGCTAGAGCATCT
TGACCACCCTAATTTTGTTCAACCTGTGTATGAAAAGTTGGATGTTTACC
CAAATTTTCGATACAATATTTTCAATCACGGGACGATCGTTTGGCGTGAA
CTATCACAAAACCAACATGTTGTGGTTATGAATGATTACGACTCCGATAA
TATTAACGGGAACGTCAAGGTTGGTTTAAACCATTAAATTTTACTTGATT
GAGGGTCTTGGTGCATCCGAACTCTGGTTTAGAAACTTTCAAGATTATGG
AACCGAACATCCAAACGACCCATATCCAACCGTTCTTGAACAGTTCAAAG
GAAAAGAAGAACTTTCACTGATCGAGCAATTCCAAGTTTTATCCCATGTC
CCGAATCTTCATTCTTGGGCTTCTGAATCAAAAAGTGGAACGAAAAAACA
ACAATATTTTGCTTCAAATGGTTACTCCCCTCGAGATATCATCTTACGTG
CTCTAGATGACATTCATTCTGACATGGAAGAAAAAGTCTCATCTATAACA
CCTATCTACTCGCTGATTTTATCCAAACAATACCATGTCCCGAAAGTGTC
TATCCACAAACAAAATGGACTAAGCATTCAACAACATTTAAAAGGCTCAC
AACACTCGATAAACATTCAATCGATAAAACCATTAAATCAGCACACGACT
CTTTAAAGGAAACATTTAAAAGTTTTGCACCTGGTTTTGTATTTTATTGC
CGTAGAGACATGTCTCATACAAATCGAAATACTGATCCCAAAGATAACCA
GTGTTTTGAGTCGGGTGTGTACAAAGGCTACTTTGATCAAACTGAAATGT
TTGGTGAACTCATGGATCAGTATGAAATCACCAAGAAGTTTGTCATCAGG
ATATACACAGAGTGGGATGTTCTTGCTGTTTATCACACTGAACGAAACAA
ACATAAAAAGGATGCTCTATCAAAAAATAATAAGTGACAGCATCACTGAT
CTCCAATCTCAGACCCCTCCACTTATACTATGTGAAAGGAAATTGCTGAC
TTTATCTAGTCATGTTGGGTGTACGGATGGTATTCTGTATGCAATGCCTT
TGATAGCAGAAATTAATGGTGAAAGACATTTATACATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026176XLOC_026176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042323-exon-sc0003345-1575043694:6989..7116TCONS_00042323-exon-sc0003345-1575043694:6989..7116Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1575043694:6701..6838TCONS_00042323-exon-sc0003345-1575043694:6701..6838Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1575043694:6159..6405TCONS_00042323-exon-sc0003345-1575043694:6159..6405Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1575043694:5849..6009TCONS_00042323-exon-sc0003345-1575043694:5849..6009Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1575043694:5550..5733TCONS_00042323-exon-sc0003345-1575043694:5550..5733Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1575043694:4901..5279TCONS_00042323-exon-sc0003345-1575043694:4901..5279Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1575043694:3486..3842TCONS_00042323-exon-sc0003345-1575043694:3486..3842Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1510915933:6989..7116TCONS_00042323-exon-sc0003345-1510915933:6989..7116Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1510915933:6701..6838TCONS_00042323-exon-sc0003345-1510915933:6701..6838Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1510915933:6159..6405TCONS_00042323-exon-sc0003345-1510915933:6159..6405Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1510915933:5849..6009TCONS_00042323-exon-sc0003345-1510915933:5849..6009Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1510915933:5550..5733TCONS_00042323-exon-sc0003345-1510915933:5550..5733Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1510915933:4901..5279TCONS_00042323-exon-sc0003345-1510915933:4901..5279Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1510915933:3486..3842TCONS_00042323-exon-sc0003345-1510915933:3486..3842Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1491911889:6989..7116TCONS_00042323-exon-sc0003345-1491911889:6989..7116Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1491911889:6701..6838TCONS_00042323-exon-sc0003345-1491911889:6701..6838Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1491911889:6159..6405TCONS_00042323-exon-sc0003345-1491911889:6159..6405Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1491911889:5849..6009TCONS_00042323-exon-sc0003345-1491911889:5849..6009Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1491911889:5550..5733TCONS_00042323-exon-sc0003345-1491911889:5550..5733Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1491911889:4901..5279TCONS_00042323-exon-sc0003345-1491911889:4901..5279Clytia hemisphaericaexon
TCONS_00042323-exon-sc0003345-1491911889:3486..3842TCONS_00042323-exon-sc0003345-1491911889:3486..3842Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042323-proteinTCONS_00042323-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003345supercontigsc0003345:3486..7116 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.838468	0.00234356	0.0946848	2.24952	0.255906	0.698366	1.34372	1.21117	0.383656	1.04495	0.0151849	1.51513	0.39534	0.294243	0.782846	1.63752	0.508017	2.59278	0	3.4726	5.11496	1.08387	1.61306	8.84701e-06	0.631096	1.99646	1.25084	0.12599	1.1599
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042323 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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