TCONS_00041853 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00041853
Unique Name	TCONS_00041853
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2516

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0003049:11420..14771+
coding sequence from alignment at sc0003049:11420..14771+

transcript sequence

>TCONS_00041853 ID=TCONS_00041853|Name=TCONS_00041853|organism=Clytia hemisphaerica|type=transcript|length=2516bp
TTTgtctttgtttgaaaaataaatagcaATTCAATAGGAAATTTAAAGAG
AAAGATTTAAAATGGAAtagatttctaaaaaagaaataaacgtAGTTAGT
TATGCTCCAAATAATGGACCTTTGTCGTTTCAAAACTGCTTTTTGTGTGA
AGTCATTCCCTTCATCAATAGAATAAACAGGTTTTTGTTCAAGTAGGATT
TCAAAAGAATTAACATAACACAATTTATCTGCCCTTCATGGTAAACAATT
TATTTTCGATGTTAAGAAACAGGTGTTCTTCACTAATCCTCTAGAAAAAc
gaaacaaaataatcataaaaGGTATATGATATTGTTATGTAACATTTTGT
AAAGCAAAAAAATGGATACCATAAAAATCGCTTATCTTCACTTTAGAGTT
TTTGGCTATCAAGCTTTCAATCTTTCATTTCTGTGTGTCGGTTTCTTTTG
TACATTGGAGTTTGGAAAGCAAAATAAGtaaagtattttttatttaaaac
aatGGTATTTCCCAATGATCTTTTCGGACTTTAATGAGATATTTACTTCT
CGTTTCATTCAGGATGGAGTTCTTCCACCAGTTCTTTATGTACAAATGGA
TAATTGCTGGAGAGAgaataaaaatcagtttttattAGCCTTTTTTGCGT
TTTTGGTGTTAAAAAGAATCGTTAAAAAGGTTCGTCTTTCTTACTTGCTT
GTTGGACATACCCACGAAGATATCGATAGTACATTCAGTAACATTTCAAC
GACCTTAAACAAGAAAGACGTATTCACAATTGATCACCTGCTTCAAACGA
TTAAGGAATCCTTTCAGAAACAAAACACGAGTGTTTCTTTACTGAAATAT
GTATTCAATTACCGGGACTGGTTTATGCCCAACATAAGAACACCGTCTCA
TCACACTGAGCCGCACGCTTACAAGTTTGAGCTAGTCAACGAGGAAGTTG
ACTTGTCTTTTAAACGTTTCGCAATGGATCCAGAATGGACCCAACTCAAG
CCAGCACTCCTTTCGCATCTACCAACTGGACCCATTCCCTTGGTACGGTT
TAGTTGGAGAAAACAACTTCCAGTAGAcgagattgaagaaaaaatacaaT
CTTGCTCTGTGAAATTGCCCCATCAATCAATGATATGGTGGGGTAATTTC
ACCGACAATCTACGAAAGGAACAAATGAAATGGAGTGAAGCCAGTGCTGC
AACTCTGATATCAGATGGTGGATGCTTTTTGAGTTATTTGAAACCTTACG
CAGATGTTGTGCCGTTCTCAAAAATGTCAGAGGACGACGCAAGGAGAAAC
GAGCATATAGATATGCTCATGGAAAAGTCACAAAGGACTCCGCGTacGGC
GATTTCAAAGCATTCCGAGCGCGAGAagccaaagaaaaagaagaagaaaa
atcccACTGAAACGGCAAACGAAAACAAAACGAACAAAacgaacaaaaag
aaaaaaaacaatgaaacggCAAAcgcaaacaaaacaaacaaaaagaaaaa
caacaaaaacgaaaAGGATCCGCTCTCAAAAGCAAAGGCACGGGTCAAGG
CAAAAAGGGCTTTAAAAGTCAAGTCCAGAAATGTAATAGCCGGAAAAGGA
GCAGAAAAAAACGTTATGAATGTTAGCTTATGAAATATGTTGCacgtttt
tatttcaaaggaaCCATGAAATATGGAATGAACCTCGACTGTTctacatt
ttctcaaaatttcctatCCATCACAAGCTCGGAATGAATTTCCACCAAAG
CTGTATCATCTTTTTCTATATcgataaaaaggaaaaataaaacagaaaac
tTTTACATGTTTTAACCTCGGTactattcttaaattgttctaatTTTTTG
CNTCTTGGGCATTATGatatttagtgacgtggtggtataaccaagaaact
taaaaatccttttagtaccacgacgtactaaaataccaaaaaggcgGTAT
CCAGACTAAAAAATCAgaacttttgagaaaaatggtctagagaagaaaaa
aattgtcctcaGAAGACCAAAATTGGGTGGTCTCTGTGCCAAAACATCCc
caaaaattttattacatgggcAATAAAAGACCATTCCTCCAAAATGGGGT
GATAGTATGCAAAAGATTCTCGAGAACCCTTCTAGTACTCacatatgtct
gagattttggtactgacccccccccctgtttccGCTGGAATTCGAATCGG
CGAAAGTTAACTGTATATTGGTCAAACTTTTTACACTTTTAGCATGCTTG
GATTCGAAATACAGAAGTACAGTACAGAGAAAGTTCTACGGATACTCTTA
CTGCATGGTTCATTTTAAAATAGTGATTGAAAGATTATGATTTAAATTAT
ATTTGGCCCTAGAGGGGGATTAGAGATATGTTAATCCTAACCCTAAATTA
CAAGCTATCATGTTATCAGAGATCTAGAAAAGAAGATTCCCTGAGTCTGC
CCAAGTTATCGAGGCCATGTGCCCATATACTCTTATGGTAAGTTCCCAAA
AATCATGGAAATTTTC

Run BLAST on NCBI

protein sequence of TCONS_00041853-protein

>TCONS_00041853-protein ID=TCONS_00041853-protein|Name=TCONS_00041853-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MIFSDFNEIFTSRFIQDGVLPPVLYVQMDNCWRENKNQFLLAFFAFLVLK
RIVKKVRLSYLLVGHTHEDIDSTFSNISTTLNKKDVFTIDHLLQTIKESF
QKQNTSVSLLKYVFNYRDWFMPNIRTPSHHTEPHAYKFELVNEEVDLSFK
RFAMDPEWTQLKPALLSHLPTGPIPLVRFSWRKQLPVDEIEEKIQSCSVK
LPHQSMIWWGNFTDNLRKEQMKWSEASAATLISDGGCFLSYLKPYADVVP
FSKMSEDDARRNEHIDMLMEKSQRTPRTAISKHSEREKPKKKKKKNPTET
ANENKTNKTNKKKKNNETANANKTNKKKNNKNEKDPLSKAKARVKAKRAL
KVKSRNVIAGKGAEKNVMNVSL

Run BLAST on NCBI

transcript from alignment at sc0003049:11420..14771+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00041853 ID=TCONS_00041853|Name=TCONS_00041853|organism=Clytia hemisphaerica|type=transcript|length=3352bp|location=Sequence derived from alignment at sc0003049:11420..14771+ (Clytia hemisphaerica)
TTTgtctttgtttgaaaaataaatagcaATTCAATAGGAAATTTAAAGAG
AAAGATTTAAAATGGAAtagatttctaaaaaagaaataaacgtAGTTAGT
TATGCTCCAAATAATGGACCTTTGTCGTTTCAAAACTGCTTTTTGTGTGA
AGTCATTCCCTTCATCAATAGAATAAACAGGTTTTTGTTCAAGTAGGATT
TCAAAAGAATTAACATAACACAATTTATCTGCCCTTCATGGTAAACAATT
TATTTTCGATGTTAAGAAACAGGTGTTCTTCACTAATCCTCTAGAAAAAc
gaaacaaaataatcataaaaGGTATATGATATTGTTATGTAACATTTTGT
AAAGCAAAAAAATGGATACCATAAAAATCGCTTATCTTCACTTTAGAGTT
TTTGGCTATCAAGCTTTCAATCTTTCATTTCTGTGTGTCGGTTTCTTTTG
TACATTGGAGTTTGGAAAGCAAAATAAGtaaagtattttttatttaaaac
aatGGTATTTCCCAATGATCTTTTCGGACTTTAATGAGATATTTACTTCT
CGTTTCATTCAGGATGGAGTTCTTCCACCAGTTCTTTATGTACAAATGGA
TAATTGCTGGAGAGAgaataaaaatcagtttttattAGCCTTTTTTGCGT
TTTTGGTGTTAAAAAGAATCGTTAAAAAGGTATATAAATACAACAATACT
CATCAAGACTTGAATATAGTTTAATTAATTAATGCCTAATtaatgaagaa
aagaaaaccAATTACTATAAAATTACTGTAAAAAGTTACAGTCGGCAAAT
GGTACCGAAATGATATCAACATTTTAGTTTCTGCTCGTAAATTCTTAAAA
CGCACCGTTTATACCAATTTAAACTTATGCATAAAATGTTCTTGAGCAAA
TAAAAAGATGATGTGTTACAAAAGAATGTATCCTTTGGttgaatgaaaat
aaacatATTGATTCGACATTAGGTTCGTCTTTCTTACTTGCTTGTTGGAC
ATACCCACGAAGATATCGATAGTGTaaggaaattattttcataatttttc
ctCTTCAtcaatttgttttaattttcttccaaaatagAAAAGACTTTTGC
ATTTGTCGATTTAAGTTATAGGCGATGGACGTACAAAACTTAATctcttt
ttatacatttttaatCTTATCAGACATTCAGTAACATTTCAACGACCTTA
AACAAGAAAGACGTATTCACAATTGATCACCTGCTTCAAACGATTAAGGA
ATCCTTTCAGAAACAAAACACGAGTGTTTCTTTACTGAAATATGTATTCA
ATTACCGGGACTGGTTTATGCCCAACATAAGAACACCGTCTCATCACACT
GAGCCGCACGCTTACAAGTTTGAGCTAGTCAACGAGGAAGTTGACTTGTC
TTTTAAACGTTTCGCAATGGATCCAGAATGGACCCAACTCAAGCCAGCAC
TCCTTTCGCATCTACCAACTGGACCCATTCCCTTGGTACGGTTTAGTTGG
AGAAAACAACTTCCAGTAGAcgagattgaagaaaaaatacaaTCTTGCTC
TGTGAAATTGCCCCATCAATCAATGATATGGTGGGGTAATTTCACCGACA
ATCTACGAAAGGAACAAATGTAAGAGTCTCCTTTCTTCAAAAGTATGGAA
AATTGAGCTAAAAACAGTATTTATCAGTCTAAACTCGTAAACTCGAAATT
TTTAGTCAATGATTCCCGTTCTGGTcgattttattgttttaaaaagcacg
tgtttccatttttttaattgaaatcaatttttggaatcAATTCTTTTCCA
AGGAAATGGAGTGAAGCCAGTGCTGCAACTCTGATATCAGATGGTGGATG
CTTTTTGAGTTATTTGAAACCTTACGCAGATGTTGTGCCGTTCTCAAAAG
TATGTGCATAAACATTTTAATGtatctttttcaaaagtaaagaaaagaga
agaaaatttaatagaattcatttaaattttaatcaaatatCTCTTAGATG
TCAGAGGACGACGCAAGGAGAAACGAGCATATAGATATGCTCATGGAAAA
GTCACAAAGGACTCCGCGTGTAAGGATTTGATTAAAGAATTATTTGTAAT
AAAGCAATTATGTTATCTCTAATTGAATAGAAAAGTAGAAGAAGAATAAG
TGTATTTCAATtgaatttatttcaattttagacGGCGATTTCAAAGCATT
CCGAGCGCGAGAagccaaagaaaaagaagaagaaaaatcccACTGAAACG
GCAAACGAAAACAAAACGAACAAAacgaacaaaaagaaaaaaaacaatga
aacggCAAAcgcaaacaaaacaaacaaaaagaaaaacaacaaaaacgaaa
AGGATCCGCTCTCAAAAGCAAAGGCACGGGTCAAGGCAAAAAGGGCTTTA
AAAGTCAAGTCCAGAAATGTAATAGCCGGAAAAGGAGCAGAAAAAAACGT
TATGAATGTTAGCTTATGAAATATGTTGCacgtttttatttcaaaggaaC
CATGAAATATGGAATGAACCTCGACTGTTctacattttctcaaaatttcc
tatCCATCACAAGCTCGGAATGAATTTCCACCAAAGCTGTATCATCTTTT
TCTATATcgataaaaaggaaaaataaaacagaaaactTTTACATGTTTTA
ACCTCGGTactattcttaaattgttctaatTTTTTGCNTCTTGGGCATTA
TGatatttagtgacgtggtggtataaccaagaaacttaaaaatcctttta
gtaccacgacgtactaaaataccaaaaaggcgGTATCCAGACTAAAAAAT
CAgaacttttgagaaaaatggtctagagaagaaaaaaattgtcctcaGAA
GACCAAAATTGGGTGGTCTCTGTGCCAAAACATCCccaaaaattttatta
catgggcAATAAAAGACCATTCCTCCAAAATGGGGTGATAGTATGCAAAA
GATTCTCGAGAACCCTTCTAGTACTCacatatgtctgagattttggtact
gacccccccccctgtttccGCTGGAATTCGAATCGGCGAAAGTTAACTGT
ATATTGGTCAAACTTTTTACACTTTTAGCATGCTTGGATTCGAAATACAG
AAGTACAGTACAGAGAAAGTTCTACGGATACTCTTACTGCATGGTTCATT
TTAAAATAGTGATTGAAAGATTATGATTTAAATTATATTTGGCCCTAGAG
GGGGATTAGAGATATGTTAATCCTAACCCTAAATTACAAGCTATCATGTT
ATCAGAGATCTAGAAAAGAAGATTCCCTGAGTCTGCCCAAGTTATCGAGG
CCATGTGCCCATATACTCTTATGGTAAGTTCCCAAAAATCATGGAAATTT
TC

Coding sequence (CDS) from alignment at sc0003049:11420..14771+

>TCONS_00041853 ID=TCONS_00041853|Name=TCONS_00041853|organism=Clytia hemisphaerica|type=CDS|length=6714bp|location=Sequence derived from alignment at sc0003049:11420..14771+ (Clytia hemisphaerica)
ATGATCTTTTCGGACTTTAATGAGATATTTACTTCTCGTTTCATTCAGGA
TGGAGTTCTTCCACCAGTTCTTTATGTACAAATGGATAATTGCTGGAGAG
AgaataaaaatcagtttttattAGCCTTTTTTGCGTTTTTGGTGTTAAAA
AGAATCGTTAAAAAGGTTCGTCTTTCTTACTTGCTTGTTGGACATACCCA
CGAAGATATCGATAGTACATTCAGTAACATTTCAACGACCTTAAACAAGA
AAGACGTATTCACAATTGATCACCTGCTTCAAACGATTAAGGAATCCTTT
CAGAAACAAAACACGAGTGTTTCTTTACTGAAATATGTATTCAATTACCG
GGACTGGTTTATGCCCAACATAAGAACACCGTCTCATCACACTGAGCCGC
ACGCTTACAAGTTTGAGCTAGTCAACGAGGAAGTTGACTTGTCTTTTAAA
CGTTTCGCAATGGATCCAGAATGGACCCAACTCAAGCCAGCACTCCTTTC
GCATCTACCAACTGGACCCATTCCCTTGGTACGGTTTAGTTGGAGAAAAC
AACTTCCAGTAGAcgagattgaagaaaaaatacaaTCTTGCTCTGTGAAA
TTGCCCCATCAATCAATGATATGGTGGGGTAATTTCACCGACAATCTACG
AAAGGAACAAATGAAATGGAGTGAAGCCAGTGCTGCAACTCTGATATCAG
ATGGTGGATGCTTTTTGAGTTATTTGAAACCTTACGCAGATGTTGTGCCG
TTCTCAAAAATGTCAGAGGACGACGCAAGGAGAAACGAGCATATAGATAT
GCTCATGGAAAAGTCACAAAGGACTCCGCGTacGGCGATTTCAAAGCATT
CCGAGCGCGAGAagccaaagaaaaagaagaagaaaaatcccACTGAAACG
GCAAACGAAAACAAAACGAACAAAacgaacaaaaagaaaaaaaacaatga
aacggCAAAcgcaaacaaaacaaacaaaaagaaaaacaacaaaaacgaaa
AGGATCCGCTCTCAAAAGCAAAGGCACGGGTCAAGGCAAAAAGGGCTTTA
AAAGTCAAGTCCAGAAATGTAATAGCCGGAAAAGGAGCAGAAAAAAACGT
TATGAATGTTAGCTTATGAATGATCTTTTCGGACTTTAATGAGATATTTA
CTTCTCGTTTCATTCAGGATGGAGTTCTTCCACCAGTTCTTTATGTACAA
ATGGATAATTGCTGGAGAGAgaataaaaatcagtttttattAGCCTTTTT
TGCGTTTTTGGTGTTAAAAAGAATCGTTAAAAAGGTTCGTCTTTCTTACT
TGCTTGTTGGACATACCCACGAAGATATCGATAGTACATTCAGTAACATT
TCAACGACCTTAAACAAGAAAGACGTATTCACAATTGATCACCTGCTTCA
AACGATTAAGGAATCCTTTCAGAAACAAAACACGAGTGTTTCTTTACTGA
AATATGTATTCAATTACCGGGACTGGTTTATGCCCAACATAAGAACACCG
TCTCATCACACTGAGCCGCACGCTTACAAGTTTGAGCTAGTCAACGAGGA
AGTTGACTTGTCTTTTAAACGTTTCGCAATGGATCCAGAATGGACCCAAC
TCAAGCCAGCACTCCTTTCGCATCTACCAACTGGACCCATTCCCTTGGTA
CGGTTTAGTTGGAGAAAACAACTTCCAGTAGAcgagattgaagaaaaaat
acaaTCTTGCTCTGTGAAATTGCCCCATCAATCAATGATATGGTGGGGTA
ATTTCACCGACAATCTACGAAAGGAACAAATGAAATGGAGTGAAGCCAGT
GCTGCAACTCTGATATCAGATGGTGGATGCTTTTTGAGTTATTTGAAACC
TTACGCAGATGTTGTGCCGTTCTCAAAAATGTCAGAGGACGACGCAAGGA
GAAACGAGCATATAGATATGCTCATGGAAAAGTCACAAAGGACTCCGCGT
acGGCGATTTCAAAGCATTCCGAGCGCGAGAagccaaagaaaaagaagaa
gaaaaatcccACTGAAACGGCAAACGAAAACAAAACGAACAAAacgaaca
aaaagaaaaaaaacaatgaaacggCAAAcgcaaacaaaacaaacaaaaag
aaaaacaacaaaaacgaaaAGGATCCGCTCTCAAAAGCAAAGGCACGGGT
CAAGGCAAAAAGGGCTTTAAAAGTCAAGTCCAGAAATGTAATAGCCGGAA
AAGGAGCAGAAAAAAACGTTATGAATGTTAGCTTATGAATGATCTTTTCG
GACTTTAATGAGATATTTACTTCTCGTTTCATTCAGGATGGAGTTCTTCC
ACCAGTTCTTTATGTACAAATGGATAATTGCTGGAGAGAgaataaaaatc
agtttttattAGCCTTTTTTGCGTTTTTGGTGTTAAAAAGAATCGTTAAA
AAGGTTCGTCTTTCTTACTTGCTTGTTGGACATACCCACGAAGATATCGA
TAGTACATTCAGTAACATTTCAACGACCTTAAACAAGAAAGACGTATTCA
CAATTGATCACCTGCTTCAAACGATTAAGGAATCCTTTCAGAAACAAAAC
ACGAGTGTTTCTTTACTGAAATATGTATTCAATTACCGGGACTGGTTTAT
GCCCAACATAAGAACACCGTCTCATCACACTGAGCCGCACGCTTACAAGT
TTGAGCTAGTCAACGAGGAAGTTGACTTGTCTTTTAAACGTTTCGCAATG
GATCCAGAATGGACCCAACTCAAGCCAGCACTCCTTTCGCATCTACCAAC
TGGACCCATTCCCTTGGTACGGTTTAGTTGGAGAAAACAACTTCCAGTAG
AcgagattgaagaaaaaatacaaTCTTGCTCTGTGAAATTGCCCCATCAA
TCAATGATATGGTGGGGTAATTTCACCGACAATCTACGAAAGGAACAAAT
GAAATGGAGTGAAGCCAGTGCTGCAACTCTGATATCAGATGGTGGATGCT
TTTTGAGTTATTTGAAACCTTACGCAGATGTTGTGCCGTTCTCAAAAATG
TCAGAGGACGACGCAAGGAGAAACGAGCATATAGATATGCTCATGGAAAA
GTCACAAAGGACTCCGCGTacGGCGATTTCAAAGCATTCCGAGCGCGAGA
agccaaagaaaaagaagaagaaaaatcccACTGAAACGGCAAACGAAAAC
AAAACGAACAAAacgaacaaaaagaaaaaaaacaatgaaacggCAAAcgc
aaacaaaacaaacaaaaagaaaaacaacaaaaacgaaaAGGATCCGCTCT
CAAAAGCAAAGGCACGGGTCAAGGCAAAAAGGGCTTTAAAAGTCAAGTCC
AGAAATGTAATAGCCGGAAAAGGAGCAGAAAAAAACGTTATGAATGTTAG
CTTATGAATGATCTTTTCGGACTTTAATGAGATATTTACTTCTCGTTTCA
TTCAGGATGGAGTTCTTCCACCAGTTCTTTATGTACAAATGGATAATTGC
TGGAGAGAgaataaaaatcagtttttattAGCCTTTTTTGCGTTTTTGGT
GTTAAAAAGAATCGTTAAAAAGGTTCGTCTTTCTTACTTGCTTGTTGGAC
ATACCCACGAAGATATCGATAGTACATTCAGTAACATTTCAACGACCTTA
AACAAGAAAGACGTATTCACAATTGATCACCTGCTTCAAACGATTAAGGA
ATCCTTTCAGAAACAAAACACGAGTGTTTCTTTACTGAAATATGTATTCA
ATTACCGGGACTGGTTTATGCCCAACATAAGAACACCGTCTCATCACACT
GAGCCGCACGCTTACAAGTTTGAGCTAGTCAACGAGGAAGTTGACTTGTC
TTTTAAACGTTTCGCAATGGATCCAGAATGGACCCAACTCAAGCCAGCAC
TCCTTTCGCATCTACCAACTGGACCCATTCCCTTGGTACGGTTTAGTTGG
AGAAAACAACTTCCAGTAGAcgagattgaagaaaaaatacaaTCTTGCTC
TGTGAAATTGCCCCATCAATCAATGATATGGTGGGGTAATTTCACCGACA
ATCTACGAAAGGAACAAATGAAATGGAGTGAAGCCAGTGCTGCAACTCTG
ATATCAGATGGTGGATGCTTTTTGAGTTATTTGAAACCTTACGCAGATGT
TGTGCCGTTCTCAAAAATGTCAGAGGACGACGCAAGGAGAAACGAGCATA
TAGATATGCTCATGGAAAAGTCACAAAGGACTCCGCGTacGGCGATTTCA
AAGCATTCCGAGCGCGAGAagccaaagaaaaagaagaagaaaaatcccAC
TGAAACGGCAAACGAAAACAAAACGAACAAAacgaacaaaaagaaaaaaa
acaatgaaacggCAAAcgcaaacaaaacaaacaaaaagaaaaacaacaaa
aacgaaaAGGATCCGCTCTCAAAAGCAAAGGCACGGGTCAAGGCAAAAAG
GGCTTTAAAAGTCAAGTCCAGAAATGTAATAGCCGGAAAAGGAGCAGAAA
AAAACGTTATGAATGTTAGCTTATGAATGATCTTTTCGGACTTTAATGAG
ATATTTACTTCTCGTTTCATTCAGGATGGAGTTCTTCCACCAGTTCTTTA
TGTACAAATGGATAATTGCTGGAGAGAgaataaaaatcagtttttattAG
CCTTTTTTGCGTTTTTGGTGTTAAAAAGAATCGTTAAAAAGGTTCGTCTT
TCTTACTTGCTTGTTGGACATACCCACGAAGATATCGATAGTACATTCAG
TAACATTTCAACGACCTTAAACAAGAAAGACGTATTCACAATTGATCACC
TGCTTCAAACGATTAAGGAATCCTTTCAGAAACAAAACACGAGTGTTTCT
TTACTGAAATATGTATTCAATTACCGGGACTGGTTTATGCCCAACATAAG
AACACCGTCTCATCACACTGAGCCGCACGCTTACAAGTTTGAGCTAGTCA
ACGAGGAAGTTGACTTGTCTTTTAAACGTTTCGCAATGGATCCAGAATGG
ACCCAACTCAAGCCAGCACTCCTTTCGCATCTACCAACTGGACCCATTCC
CTTGGTACGGTTTAGTTGGAGAAAACAACTTCCAGTAGAcgagattgaag
aaaaaatacaaTCTTGCTCTGTGAAATTGCCCCATCAATCAATGATATGG
TGGGGTAATTTCACCGACAATCTACGAAAGGAACAAATGAAATGGAGTGA
AGCCAGTGCTGCAACTCTGATATCAGATGGTGGATGCTTTTTGAGTTATT
TGAAACCTTACGCAGATGTTGTGCCGTTCTCAAAAATGTCAGAGGACGAC
GCAAGGAGAAACGAGCATATAGATATGCTCATGGAAAAGTCACAAAGGAC
TCCGCGTacGGCGATTTCAAAGCATTCCGAGCGCGAGAagccaaagaaaa
agaagaagaaaaatcccACTGAAACGGCAAACGAAAACAAAACGAACAAA
acgaacaaaaagaaaaaaaacaatgaaacggCAAAcgcaaacaaaacaaa
caaaaagaaaaacaacaaaaacgaaaAGGATCCGCTCTCAAAAGCAAAGG
CACGGGTCAAGGCAAAAAGGGCTTTAAAAGTCAAGTCCAGAAATGTAATA
GCCGGAAAAGGAGCAGAAAAAAACGTTATGAATGTTAGCTTATGAATGAT
CTTTTCGGACTTTAATGAGATATTTACTTCTCGTTTCATTCAGGATGGAG
TTCTTCCACCAGTTCTTTATGTACAAATGGATAATTGCTGGAGAGAgaat
aaaaatcagtttttattAGCCTTTTTTGCGTTTTTGGTGTTAAAAAGAAT
CGTTAAAAAGGTTCGTCTTTCTTACTTGCTTGTTGGACATACCCACGAAG
ATATCGATAGTACATTCAGTAACATTTCAACGACCTTAAACAAGAAAGAC
GTATTCACAATTGATCACCTGCTTCAAACGATTAAGGAATCCTTTCAGAA
ACAAAACACGAGTGTTTCTTTACTGAAATATGTATTCAATTACCGGGACT
GGTTTATGCCCAACATAAGAACACCGTCTCATCACACTGAGCCGCACGCT
TACAAGTTTGAGCTAGTCAACGAGGAAGTTGACTTGTCTTTTAAACGTTT
CGCAATGGATCCAGAATGGACCCAACTCAAGCCAGCACTCCTTTCGCATC
TACCAACTGGACCCATTCCCTTGGTACGGTTTAGTTGGAGAAAACAACTT
CCAGTAGAcgagattgaagaaaaaatacaaTCTTGCTCTGTGAAATTGCC
CCATCAATCAATGATATGGTGGGGTAATTTCACCGACAATCTACGAAAGG
AACAAATGAAATGGAGTGAAGCCAGTGCTGCAACTCTGATATCAGATGGT
GGATGCTTTTTGAGTTATTTGAAACCTTACGCAGATGTTGTGCCGTTCTC
AAAAATGTCAGAGGACGACGCAAGGAGAAACGAGCATATAGATATGCTCA
TGGAAAAGTCACAAAGGACTCCGCGTacGGCGATTTCAAAGCATTCCGAG
CGCGAGAagccaaagaaaaagaagaagaaaaatcccACTGAAACGGCAAA
CGAAAACAAAACGAACAAAacgaacaaaaagaaaaaaaacaatgaaacgg
CAAAcgcaaacaaaacaaacaaaaagaaaaacaacaaaaacgaaaAGGAT
CCGCTCTCAAAAGCAAAGGCACGGGTCAAGGCAAAAAGGGCTTTAAAAGT
CAAGTCCAGAAATGTAATAGCCGGAAAAGGAGCAGAAAAAAACGTTATGA
ATGTTAGCTTATGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_025753	XLOC_025753	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00041853-protein	TCONS_00041853-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0003049	supercontig	sc0003049:11420..14771 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.177343	0.214573	0.0899423	0	1.33568	0.998584	1.39566	1.92361	1.24089	0.766059	0.821752	0.710387	0.721755	0.502284	1.00313	1.13415	0.683991	1.10437	0.7184	0.92569	0.259064	0	0.623816	0.352351	0.497005	0.349749	0.771605	0.31577	0.552421	0.354102

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00041853 vs. Swiss-Prot (Human)

BLAST of TCONS_00041853 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00041853 (transcript) - C. hemisphaerica