TCONS_00039246 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039246
Unique NameTCONS_00039246
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1307

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039246 ID=TCONS_00039246|Name=TCONS_00039246|organism=Clytia hemisphaerica|type=transcript|length=1307bp
AGGACCTTACATTGTGACGcgtaaaaagaagaaagaccTGATAATAGAAG
AAGGTAAAACAGCCAAATTCAAATGCATGGTCAGCAGTAAATACACCACA
GACTGGCATTGGCAATGGATGAGTCAGGGAAACTCCCTTCAAACGTTGAA
ACCAACCAATCACGTTCGGCTAAGAGAATATGTGTTTTTGAAGATCCGTC
AGGTATCAAAGAATGATAGCGGGATGTATATTTGTACGACTACCAATAAA
TTTGGCACTACAGAGGAAACATACACATTAAAAGTCATAGATAACAAGAA
CGACAAAACTGCACCACGCGTGATAAGCCAAGTGACTAGTCTACCAGAAA
TAGTTTTGAATGACGTAGAAGTTGATTGTTCCATTGAAGGAGCTCTCCCC
GTCAATGTATCATGGGAAAAAGATGGAATTCCCCTATCACGAGTGCATCG
TCCAGGAGGTTTCCAATACGATAATCAGAGAACCATTCTCAAACTCAACA
AAATATTACCAGAAGATCGTGGCAACTATACATGCTTCATTCAAAACAAA
TACGGTTCTACTAGCCATTCAGCTGAAATTGAGCCGTTAGAAAAAGCGTT
AACGGCGCCACATTTCATCGGCCATAATGACGCCGTCATTTACGGAAACA
TCGGTGAATCATTGAACGTCACTGCTCAAGCTGTCGTTTTTAACACGGCT
CATTTCCAACTTATTCTTCATCACAACCATACAAACTCGACCACCAATAC
GACAGAACAACGTTTGACGGTCTTAAGCACACCACGTGAGATTCATCTTC
TGGGTCCTGAAACTGCACGCGAGAGTAATGATGCGTACAGATATAAACTG
ATTTTCATGTTCAAGAACTTGAATGCGTCAGACTTTGCAATTTATTCTAT
TATGGCTGGAAATACCTTTGGTTATGATGTATACCAATTTTCAATCGAGA
GACGACCAGCTGTCAAGTCACCACCAGTTGCCGAAGCATCGACAGGCAAA
CAGACAATCATCATCGTCATCATATCTCTGGCTGTCGGTTGTATCATTAT
CCTTGTTGTCGCTGCATTACTATGGAGACACAAATCAAAACGAGGCTTCA
ATAATAACAATAAATTCTTCAGTGGTACAAATATTGAGACTGTACAGTTA
AACTTGGAGCCAACAGGCCGTCGAATTAAGTACAGTTCAAACCGTTTATC
ATCATGCCATACTGAAAAAGAATATATCAGTGACTTAGTACATTATGATG
AGAAATGGGAGGTGGATTATGATAACATTGAATTACGTGGTCTGTTGGGT
GAAGGAG
Run BLAST on NCBI

protein sequence of TCONS_00039246-protein

>TCONS_00039246-protein ID=TCONS_00039246-protein|Name=TCONS_00039246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
GPYIVTRKKKKDLIIEEGKTAKFKCMVSSKYTTDWHWQWMSQGNSLQTLK
PTNHVRLREYVFLKIRQVSKNDSGMYICTTTNKFGTTEETYTLKVIDNKN
DKTAPRVISQVTSLPEIVLNDVEVDCSIEGALPVNVSWEKDGIPLSRVHR
PGGFQYDNQRTILKLNKILPEDRGNYTCFIQNKYGSTSHSAEIEPLEKAL
TAPHFIGHNDAVIYGNIGESLNVTAQAVVFNTAHFQLILHHNHTNSTTNT
TEQRLTVLSTPREIHLLGPETARESNDAYRYKLIFMFKNLNASDFAIYSI
MAGNTFGYDVYQFSIERRPAVKSPPVAEASTGKQTIIIVIISLAVGCIII
LVVAALLWRHKSKRGFNNNNKFFSGTNIETVQLNLEPTGRRIKYSSNRLS
SCHTEKEYISDLVHYDEKWEVDYDNIELRGLLGEG
Run BLAST on NCBI

transcript from alignment at sc0002053:140..2986+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039246 ID=TCONS_00039246|Name=TCONS_00039246|organism=Clytia hemisphaerica|type=transcript|length=2847bp|location=Sequence derived from alignment at sc0002053:140..2986+ (Clytia hemisphaerica)
AGGACCTTACATTGTGACGcgtaaaaagaagaaagaccTGATAATAGAAG
AAGGTAAAACAGCCAAATTCAAATGCATGGTCAGCAGTAAATACACCACA
GACTGGCATTGGCAATGGATGAGTCAGGGAAACTCCCTTCAAACGTTGAA
ACCAACCAATCACGTTCGGCTAAGAGAATATGTGTTTTTGAAGATCCGTC
AGGTATCAAAGAATGATAGCGGGATGTATATTTGTACGACTACCAATAAA
TTTGGCACTACAGAGGAAACATACACATTAAAAGTCATAGGTAAAGATCA
TTTTTTAGCCTCTTGGAATATGTCTAGCTCCTTTTAATTGACAAAAGAAT
GGTTGAAATTTAACTATCAAATGTCGATTTTTTATCAATTCAGCAGCCGA
TATAATACTTATGTACTGGATTACAANTTATCAAATGTCGATTTTTTATC
AATTCAGCAGCCGATACAATACTTATGTACTGGATTACAAGCACTTATCG
CTCTCGAGAATTCCTTAAAATTTCTGACGCCCAGTTGCCTAATTCTTCTC
AGTACTACGGATTGTAGCTATTCCTGTACAAAGCTTTGTTTGTAAAAAGA
AGATTTGAATCTAGAAATCCTTCAAAGGGGTTTAGCGCTATACGTTTAAA
ACCTTAACGTCAATCGCAAGACTTTCATAAAACCTTCGCATCTTAACAAA
AGCATTATAAtaccttaaaatgctcttaaagaTTTATTTCAAAGATGCTA
AATGATTTTTGTAAATCCGCCTGAGTGTGTGTTTTCAAAAATGGATGTCT
GATAcctaaagaattttttttcatttgatccTTTCTTTTGTCACCCACAA
TCCTTCACTTCCTTTGTTTATATCTTTTCAGATAACAAGAACGACAAAAC
TGGTAAGCAGATTATTGACTTTCTCTCCGTTGTTTTTCTGTTTGTCAGCA
AATTTTCGCCTTTTGTCTGTTATAATGATCGATTTATCCTTACTTCGAAA
ACTAGTGATTTTCCGTTCTAAGTCCTGGTAAAAAAGTCTTCATTTTCGAA
GGTGCTTTACGCCAAACTCCAGAAAATCCAAACAGTATTTCTCCAAAACT
AAAACCTAAGCCACAATCAATACTTTCAATAGCTTTGAAATTTAACTCTT
TTCTCTCTCTCTCAATAGCACCACGCGTGATAAGCCAAGTGACTAGTCTA
CCAGAAATAGTTTTGAATGACGTAGAAGTTGATTGTTCCATTGAAGGAGC
TCTCCCCGTCAATGTATCATGGTAAGTAAACATTTACCAAAGCTTCATAA
ATTTGAAATCAAGTGAAAAATTTTATATCAAAACTAAATAATCTTTTCAT
CTGAAAAGGCACTGTTAGACGTGCTGTTATCTTACACACACAAAAAAAGT
ATTTATGTAGAGACAAACTTTCTAGAGACGACCCGAAGGCTCCTCTTTCG
ATAGCTACCTACCCCGCGAAAGTAGGGGAGGACGCCACTCTTTCTCCCTG
GATTTCTCCATTTACCCTTGATCCTTCTATTAATTGCTGAGCATCAAGCA
GAGAGGCATCAAGTACCATTTTGAGAATCTTTGGTATGACCCGGCTGGGG
ATTGAACCCACAACCCTGCGAACCTTAGCCGGATGCTCTACCACTGCACT
GCGGTCGTTGTTACTTTCTAATACCTCGTGAGCTCAATATACAGTATACT
CAATGTTCTCATGTTTTTTTCTAGGGAAAAAGATGGAATTCCCCTATCAC
GAGTGCATCGTCCAGGAGGTTTCCAATACGATAATCAGAGAACCATTCTC
AAACTCAACAAAATATTACCAGAAGATCGTGGCAACTATACATGCTTCAT
TCAAAACAAATACGGTTCTACTAGCCATTCAGCTGAAATTGAGCCGTTAG
AAAAAGCGTTAACGGCGCCACATTTCATCGGCCATAATGACGCCGTCATT
TACGGAAACATCGGTGAATCATTGAACGTCACTGCTCAAGCTGTCGTTTT
TAACACGGCTCATTTCCAACTTATTCTTCATCACAACCATACAAACTCGA
CCACCAATACGACAGAACAACGTTTGACGGTCTTAAGCACACCACGTGAG
ATTCATCTTCTGGGTCCTGAAACTGCACGCGAGAGTAATGATGCGTACAG
ATATAAACTGATTTTCATGTTCAAGAACTTGAATGCGTCAGACTTTGCAA
TTTATTCTATTATGGCTGGAAATACCTTTGGTTATGATGTATACCAATTT
TCAATCGAGAGACGACCAGGTAAAACTTAAAACCCTCTAATACTTCAAAT
AAATATTCAAGCTTTCTTCTGTCAGTGAAAGGACTTTGAACAAATACAAT
TAAACTTTTGGTTCGAATAGAAAAATCCAGCTTATACAATTCACTGATTT
CTTTACCATCGCCTGGTGAGTTAGTGCACCAGAGCCACCAGAATGTTTTC
GTTCATTCGTTCATTCATTCATCCCTCTGTCTTATTTTGAAACTTTCAGC
TGTCAAGTCACCACCAGTTGCCGAAGCATCGACAGGCAAACAGACAATCA
TCATCGTCATCATATCTCTGGCTGTCGGTTGTATCATTATCCTTGTTGTC
GCTGCATTACTATGGAGACACAAATCAAAACGAGGCTTCAATAATAACAA
TAAATTCTTCAGTGGTACAAATATTGAGACTGTACAGTTAAACTTGGAGC
CAACAGGCCGTCGAATTAAGTACAGTTCAAACCGTTTATCATCATGCCAT
ACTGAAAAAGAATATATCAGTGACTTAGTACATTATGATGAGAAATGGGA
GGTGGATTATGATAACATTGAATTACGTGGTCTGTTGGGTGAAGGAG

Coding sequence (CDS) from alignment at sc0002053:140..2986+

>TCONS_00039246 ID=TCONS_00039246|Name=TCONS_00039246|organism=Clytia hemisphaerica|type=CDS|length=6525bp|location=Sequence derived from alignment at sc0002053:140..2986+ (Clytia hemisphaerica)
GGACCTTACATTGTGACGcgtaaaaagaagaaagaccTGATAATAGAAGA
AGGTAAAACAGCCAAATTCAAATGCATGGTCAGCAGTAAATACACCACAG
ACTGGCATTGGCAATGGATGAGTCAGGGAAACTCCCTTCAAACGTTGAAA
CCAACCAATCACGTTCGGCTAAGAGAATATGTGTTTTTGAAGATCCGTCA
GGTATCAAAGAATGATAGCGGGATGTATATTTGTACGACTACCAATAAAT
TTGGCACTACAGAGGAAACATACACATTAAAAGTCATAGATAACAAGAAC
GACAAAACTGCACCACGCGTGATAAGCCAAGTGACTAGTCTACCAGAAAT
AGTTTTGAATGACGTAGAAGTTGATTGTTCCATTGAAGGAGCTCTCCCCG
TCAATGTATCATGGGAAAAAGATGGAATTCCCCTATCACGAGTGCATCGT
CCAGGAGGTTTCCAATACGATAATCAGAGAACCATTCTCAAACTCAACAA
AATATTACCAGAAGATCGTGGCAACTATACATGCTTCATTCAAAACAAAT
ACGGTTCTACTAGCCATTCAGCTGAAATTGAGCCGTTAGAAAAAGCGTTA
ACGGCGCCACATTTCATCGGCCATAATGACGCCGTCATTTACGGAAACAT
CGGTGAATCATTGAACGTCACTGCTCAAGCTGTCGTTTTTAACACGGCTC
ATTTCCAACTTATTCTTCATCACAACCATACAAACTCGACCACCAATACG
ACAGAACAACGTTTGACGGTCTTAAGCACACCACGTGAGATTCATCTTCT
GGGTCCTGAAACTGCACGCGAGAGTAATGATGCGTACAGATATAAACTGA
TTTTCATGTTCAAGAACTTGAATGCGTCAGACTTTGCAATTTATTCTATT
ATGGCTGGAAATACCTTTGGTTATGATGTATACCAATTTTCAATCGAGAG
ACGACCAGCTGTCAAGTCACCACCAGTTGCCGAAGCATCGACAGGCAAAC
AGACAATCATCATCGTCATCATATCTCTGGCTGTCGGTTGTATCATTATC
CTTGTTGTCGCTGCATTACTATGGAGACACAAATCAAAACGAGGCTTCAA
TAATAACAATAAATTCTTCAGTGGTACAAATATTGAGACTGTACAGTTAA
ACTTGGAGCCAACAGGCCGTCGAATTAAGTACAGTTCAAACCGTTTATCA
TCATGCCATACTGAAAAAGAATATATCAGTGACTTAGTACATTATGATGA
GAAATGGGAGGTGGATTATGATAACATTGAATTACGTGGTCTGTTGGGTG
AAGGAGGACCTTACATTGTGACGcgtaaaaagaagaaagaccTGATAATA
GAAGAAGGTAAAACAGCCAAATTCAAATGCATGGTCAGCAGTAAATACAC
CACAGACTGGCATTGGCAATGGATGAGTCAGGGAAACTCCCTTCAAACGT
TGAAACCAACCAATCACGTTCGGCTAAGAGAATATGTGTTTTTGAAGATC
CGTCAGGTATCAAAGAATGATAGCGGGATGTATATTTGTACGACTACCAA
TAAATTTGGCACTACAGAGGAAACATACACATTAAAAGTCATAGATAACA
AGAACGACAAAACTGCACCACGCGTGATAAGCCAAGTGACTAGTCTACCA
GAAATAGTTTTGAATGACGTAGAAGTTGATTGTTCCATTGAAGGAGCTCT
CCCCGTCAATGTATCATGGGAAAAAGATGGAATTCCCCTATCACGAGTGC
ATCGTCCAGGAGGTTTCCAATACGATAATCAGAGAACCATTCTCAAACTC
AACAAAATATTACCAGAAGATCGTGGCAACTATACATGCTTCATTCAAAA
CAAATACGGTTCTACTAGCCATTCAGCTGAAATTGAGCCGTTAGAAAAAG
CGTTAACGGCGCCACATTTCATCGGCCATAATGACGCCGTCATTTACGGA
AACATCGGTGAATCATTGAACGTCACTGCTCAAGCTGTCGTTTTTAACAC
GGCTCATTTCCAACTTATTCTTCATCACAACCATACAAACTCGACCACCA
ATACGACAGAACAACGTTTGACGGTCTTAAGCACACCACGTGAGATTCAT
CTTCTGGGTCCTGAAACTGCACGCGAGAGTAATGATGCGTACAGATATAA
ACTGATTTTCATGTTCAAGAACTTGAATGCGTCAGACTTTGCAATTTATT
CTATTATGGCTGGAAATACCTTTGGTTATGATGTATACCAATTTTCAATC
GAGAGACGACCAGCTGTCAAGTCACCACCAGTTGCCGAAGCATCGACAGG
CAAACAGACAATCATCATCGTCATCATATCTCTGGCTGTCGGTTGTATCA
TTATCCTTGTTGTCGCTGCATTACTATGGAGACACAAATCAAAACGAGGC
TTCAATAATAACAATAAATTCTTCAGTGGTACAAATATTGAGACTGTACA
GTTAAACTTGGAGCCAACAGGCCGTCGAATTAAGTACAGTTCAAACCGTT
TATCATCATGCCATACTGAAAAAGAATATATCAGTGACTTAGTACATTAT
GATGAGAAATGGGAGGTGGATTATGATAACATTGAATTACGTGGTCTGTT
GGGTGAAGGAGGACCTTACATTGTGACGcgtaaaaagaagaaagaccTGA
TAATAGAAGAAGGTAAAACAGCCAAATTCAAATGCATGGTCAGCAGTAAA
TACACCACAGACTGGCATTGGCAATGGATGAGTCAGGGAAACTCCCTTCA
AACGTTGAAACCAACCAATCACGTTCGGCTAAGAGAATATGTGTTTTTGA
AGATCCGTCAGGTATCAAAGAATGATAGCGGGATGTATATTTGTACGACT
ACCAATAAATTTGGCACTACAGAGGAAACATACACATTAAAAGTCATAGA
TAACAAGAACGACAAAACTGCACCACGCGTGATAAGCCAAGTGACTAGTC
TACCAGAAATAGTTTTGAATGACGTAGAAGTTGATTGTTCCATTGAAGGA
GCTCTCCCCGTCAATGTATCATGGGAAAAAGATGGAATTCCCCTATCACG
AGTGCATCGTCCAGGAGGTTTCCAATACGATAATCAGAGAACCATTCTCA
AACTCAACAAAATATTACCAGAAGATCGTGGCAACTATACATGCTTCATT
CAAAACAAATACGGTTCTACTAGCCATTCAGCTGAAATTGAGCCGTTAGA
AAAAGCGTTAACGGCGCCACATTTCATCGGCCATAATGACGCCGTCATTT
ACGGAAACATCGGTGAATCATTGAACGTCACTGCTCAAGCTGTCGTTTTT
AACACGGCTCATTTCCAACTTATTCTTCATCACAACCATACAAACTCGAC
CACCAATACGACAGAACAACGTTTGACGGTCTTAAGCACACCACGTGAGA
TTCATCTTCTGGGTCCTGAAACTGCACGCGAGAGTAATGATGCGTACAGA
TATAAACTGATTTTCATGTTCAAGAACTTGAATGCGTCAGACTTTGCAAT
TTATTCTATTATGGCTGGAAATACCTTTGGTTATGATGTATACCAATTTT
CAATCGAGAGACGACCAGCTGTCAAGTCACCACCAGTTGCCGAAGCATCG
ACAGGCAAACAGACAATCATCATCGTCATCATATCTCTGGCTGTCGGTTG
TATCATTATCCTTGTTGTCGCTGCATTACTATGGAGACACAAATCAAAAC
GAGGCTTCAATAATAACAATAAATTCTTCAGTGGTACAAATATTGAGACT
GTACAGTTAAACTTGGAGCCAACAGGCCGTCGAATTAAGTACAGTTCAAA
CCGTTTATCATCATGCCATACTGAAAAAGAATATATCAGTGACTTAGTAC
ATTATGATGAGAAATGGGAGGTGGATTATGATAACATTGAATTACGTGGT
CTGTTGGGTGAAGGAGGACCTTACATTGTGACGcgtaaaaagaagaaaga
ccTGATAATAGAAGAAGGTAAAACAGCCAAATTCAAATGCATGGTCAGCA
GTAAATACACCACAGACTGGCATTGGCAATGGATGAGTCAGGGAAACTCC
CTTCAAACGTTGAAACCAACCAATCACGTTCGGCTAAGAGAATATGTGTT
TTTGAAGATCCGTCAGGTATCAAAGAATGATAGCGGGATGTATATTTGTA
CGACTACCAATAAATTTGGCACTACAGAGGAAACATACACATTAAAAGTC
ATAGATAACAAGAACGACAAAACTGCACCACGCGTGATAAGCCAAGTGAC
TAGTCTACCAGAAATAGTTTTGAATGACGTAGAAGTTGATTGTTCCATTG
AAGGAGCTCTCCCCGTCAATGTATCATGGGAAAAAGATGGAATTCCCCTA
TCACGAGTGCATCGTCCAGGAGGTTTCCAATACGATAATCAGAGAACCAT
TCTCAAACTCAACAAAATATTACCAGAAGATCGTGGCAACTATACATGCT
TCATTCAAAACAAATACGGTTCTACTAGCCATTCAGCTGAAATTGAGCCG
TTAGAAAAAGCGTTAACGGCGCCACATTTCATCGGCCATAATGACGCCGT
CATTTACGGAAACATCGGTGAATCATTGAACGTCACTGCTCAAGCTGTCG
TTTTTAACACGGCTCATTTCCAACTTATTCTTCATCACAACCATACAAAC
TCGACCACCAATACGACAGAACAACGTTTGACGGTCTTAAGCACACCACG
TGAGATTCATCTTCTGGGTCCTGAAACTGCACGCGAGAGTAATGATGCGT
ACAGATATAAACTGATTTTCATGTTCAAGAACTTGAATGCGTCAGACTTT
GCAATTTATTCTATTATGGCTGGAAATACCTTTGGTTATGATGTATACCA
ATTTTCAATCGAGAGACGACCAGCTGTCAAGTCACCACCAGTTGCCGAAG
CATCGACAGGCAAACAGACAATCATCATCGTCATCATATCTCTGGCTGTC
GGTTGTATCATTATCCTTGTTGTCGCTGCATTACTATGGAGACACAAATC
AAAACGAGGCTTCAATAATAACAATAAATTCTTCAGTGGTACAAATATTG
AGACTGTACAGTTAAACTTGGAGCCAACAGGCCGTCGAATTAAGTACAGT
TCAAACCGTTTATCATCATGCCATACTGAAAAAGAATATATCAGTGACTT
AGTACATTATGATGAGAAATGGGAGGTGGATTATGATAACATTGAATTAC
GTGGTCTGTTGGGTGAAGGAGGACCTTACATTGTGACGcgtaaaaagaag
aaagaccTGATAATAGAAGAAGGTAAAACAGCCAAATTCAAATGCATGGT
CAGCAGTAAATACACCACAGACTGGCATTGGCAATGGATGAGTCAGGGAA
ACTCCCTTCAAACGTTGAAACCAACCAATCACGTTCGGCTAAGAGAATAT
GTGTTTTTGAAGATCCGTCAGGTATCAAAGAATGATAGCGGGATGTATAT
TTGTACGACTACCAATAAATTTGGCACTACAGAGGAAACATACACATTAA
AAGTCATAGATAACAAGAACGACAAAACTGCACCACGCGTGATAAGCCAA
GTGACTAGTCTACCAGAAATAGTTTTGAATGACGTAGAAGTTGATTGTTC
CATTGAAGGAGCTCTCCCCGTCAATGTATCATGGGAAAAAGATGGAATTC
CCCTATCACGAGTGCATCGTCCAGGAGGTTTCCAATACGATAATCAGAGA
ACCATTCTCAAACTCAACAAAATATTACCAGAAGATCGTGGCAACTATAC
ATGCTTCATTCAAAACAAATACGGTTCTACTAGCCATTCAGCTGAAATTG
AGCCGTTAGAAAAAGCGTTAACGGCGCCACATTTCATCGGCCATAATGAC
GCCGTCATTTACGGAAACATCGGTGAATCATTGAACGTCACTGCTCAAGC
TGTCGTTTTTAACACGGCTCATTTCCAACTTATTCTTCATCACAACCATA
CAAACTCGACCACCAATACGACAGAACAACGTTTGACGGTCTTAAGCACA
CCACGTGAGATTCATCTTCTGGGTCCTGAAACTGCACGCGAGAGTAATGA
TGCGTACAGATATAAACTGATTTTCATGTTCAAGAACTTGAATGCGTCAG
ACTTTGCAATTTATTCTATTATGGCTGGAAATACCTTTGGTTATGATGTA
TACCAATTTTCAATCGAGAGACGACCAGCTGTCAAGTCACCACCAGTTGC
CGAAGCATCGACAGGCAAACAGACAATCATCATCGTCATCATATCTCTGG
CTGTCGGTTGTATCATTATCCTTGTTGTCGCTGCATTACTATGGAGACAC
AAATCAAAACGAGGCTTCAATAATAACAATAAATTCTTCAGTGGTACAAA
TATTGAGACTGTACAGTTAAACTTGGAGCCAACAGGCCGTCGAATTAAGT
ACAGTTCAAACCGTTTATCATCATGCCATACTGAAAAAGAATATATCAGT
GACTTAGTACATTATGATGAGAAATGGGAGGTGGATTATGATAACATTGA
ATTACGTGGTCTGTTGGGTGAAGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023653XLOC_023653Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039246-exon-sc0002053-1491911889:140..429TCONS_00039246-exon-sc0002053-1491911889:140..429Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1510915933:140..429TCONS_00039246-exon-sc0002053-1510915933:140..429Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1575043694:140..429TCONS_00039246-exon-sc0002053-1575043694:140..429Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1491911889:1021..1041TCONS_00039246-exon-sc0002053-1491911889:1021..1041Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1510915933:1021..1041TCONS_00039246-exon-sc0002053-1510915933:1021..1041Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1575043694:1021..1041TCONS_00039246-exon-sc0002053-1575043694:1021..1041Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1491911889:1308..1410TCONS_00039246-exon-sc0002053-1491911889:1308..1410Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1510915933:1308..1410TCONS_00039246-exon-sc0002053-1510915933:1308..1410Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1575043694:1308..1410TCONS_00039246-exon-sc0002053-1575043694:1308..1410Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1491911889:1864..2408TCONS_00039246-exon-sc0002053-1491911889:1864..2408Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1510915933:1864..2408TCONS_00039246-exon-sc0002053-1510915933:1864..2408Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1575043694:1864..2408TCONS_00039246-exon-sc0002053-1575043694:1864..2408Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1491911889:2639..2986TCONS_00039246-exon-sc0002053-1491911889:2639..2986Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1510915933:2639..2986TCONS_00039246-exon-sc0002053-1510915933:2639..2986Clytia hemisphaericaexon
TCONS_00039246-exon-sc0002053-1575043694:2639..2986TCONS_00039246-exon-sc0002053-1575043694:2639..2986Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039246-proteinTCONS_00039246-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002053supercontigsc0002053:140..2986 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.578191	0.486248	0.391192	0	25.0004	16.1681	19.7484	21.2641	8.64351	15.1647	6.34785	8.294	13.0545	16.8728	13.7611	18.3951	18.6588	20.9747	9.80748	16.5926	21.2681	20.292	7.78343	12.9223	14.5293	13.2133	36.2463	21.3133	1.61769	1.4525
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039246 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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