TCONS_00039246-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039246-protein
Unique NameTCONS_00039246-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length435

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039246-protein ID=TCONS_00039246-protein|Name=TCONS_00039246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
GPYIVTRKKKKDLIIEEGKTAKFKCMVSSKYTTDWHWQWMSQGNSLQTLK
PTNHVRLREYVFLKIRQVSKNDSGMYICTTTNKFGTTEETYTLKVIDNKN
DKTAPRVISQVTSLPEIVLNDVEVDCSIEGALPVNVSWEKDGIPLSRVHR
PGGFQYDNQRTILKLNKILPEDRGNYTCFIQNKYGSTSHSAEIEPLEKAL
TAPHFIGHNDAVIYGNIGESLNVTAQAVVFNTAHFQLILHHNHTNSTTNT
TEQRLTVLSTPREIHLLGPETARESNDAYRYKLIFMFKNLNASDFAIYSI
MAGNTFGYDVYQFSIERRPAVKSPPVAEASTGKQTIIIVIISLAVGCIII
LVVAALLWRHKSKRGFNNNNKFFSGTNIETVQLNLEPTGRRIKYSSNRLS
SCHTEKEYISDLVHYDEKWEVDYDNIELRGLLGEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023653XLOC_023653Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039246TCONS_00039246Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR013098Ig_I-set
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 16..85
e-value: 0.018
score: 23.8
coord: 117..185
e-value: 9.8E-11
score: 51.7
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 113..196
e-value: 0.08
score: 22.1
coord: 10..96
e-value: 1.1E-9
score: 48.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 4..118
e-value: 2.0E-16
score: 59.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 119..195
e-value: 3.3E-13
score: 49.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 198..318
e-value: 0.17
score: 11.5
IPR013098Immunoglobulin I-setPFAMPF07679I-setcoord: 121..193
e-value: 1.8E-10
score: 40.6
coord: 8..95
e-value: 5.6E-12
score: 45.5
NoneNo IPR availablePIRSFPIRSF000615TyrPK_CSF1-Rcoord: 410..435
e-value: 50.0
score: -0.3
coord: 2..366
e-value: 2.2E-15
score: 53.8
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 105..194
score: 11.315
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 2..94
score: 11.824
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 103..197
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 4..95

Blast
[Close]
BLAST of TCONS_00039246-protein vs. Swiss-Prot (Human)
Match: FGFR2 (Fibroblast growth factor receptor 2 OS=Homo sapiens GN=FGFR2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.383e-19
Identity = 102/468 (21.79%), Postives = 178/468 (38.03%), Query Frame = 0 
Query:   14 IIEEGKTAKFKCMVSSKYTTDWHWQWMSQGNSLQTLKPTNHVRLREYVFLKIRQVSKNDSGMYICTTTNKFGTTEETYTLKVID--------------------NKNDKTAP------RVISQVTSLPEIVLNDVEVDCSIEGALPVNVSWEKDGIPLSRVHRPGGFQYDNQRTILKLNKILPEDRGNYTCFIQNKYGSTSHSAEIEPLEKALTAPHFIGHNDAVIYGNIGESLNVTAQAVVFNTAHFQLILHHNHTNSTTNTTEQRLTVLSTPREIHLLGPETARESNDAYRYKLIFMFKNLNASDFAIYSIMAGNTFGYDVYQFSIERRPAVKSPPVAEASTGKQTIIIVIISLAVGCIIILVVAALLWRHKSKRGFNNNNKFFSGTNIETVQLNLEPTGRRIKYS----------------SNRLSSCHTEKEYISDLVHY----DEKWEVDYDNIELRGLLGEG 435
            +   G++ + +C++       W    +  G + +T      V + EY  L+I+  +  DSG+Y CT +    +    + + V D                    N N+K AP      ++  ++ ++P    N V+  C   G     + W K+G    + HR GG++  NQ   L +  ++P D+GNYTC ++N+YGS +H+  ++ +E++   P       A     +G  +    +       H Q I H     S              P  +  L    A   N   +   +   +N+   D   Y+ +AGN+ G   +   +   PA       E +     + I I  + V  I  +VV  +L R K+         F S   +  +   + P  R++  S                + RLSS   +   ++ +  Y    D KWE   D + L   LGEG
Sbjct:   51 VAAPGESLEVRCLLKDAAVISWTKDGVHLGPNNRT------VLIGEY--LQIKGATPRDSGLYACTASRTVDSETWYFMVNVTDAISSGDDEDDTDGAEDFVSENSNNKRAPYWTNTEKMEKRLHAVP--AANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSPHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYG-----------PDGLPYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTVLPAPGRE--KEITASPDYLEIAIYCIGVFLIACMVVTVILCRMKNT---TKKPDFSSQPAVHKLTKRI-PLRRQVTVSAESSSSMNSNTPLVRITTRLSST-ADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEG 490
The following BLAST results are available for this feature:
BLAST of TCONS_00039246-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGFR21.383e-1921.79Fibroblast growth factor receptor 2 OS=Homo sapien... [more]
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