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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038710 ID=TCONS_00038710|Name=TCONS_00038710|organism=Clytia hemisphaerica|type=transcript|length=814bp
GTTGtgcatagcactccttatcacacgcctaaattactaaaattaaggtt
ttaggagtgtgattgaccacacgcctgaaattttcaaatgatgcagcctg
ctTTAGGTATCAGTAACACAGTTGCATAGATAAAAACTCAGTTTGCGGCT
GATGGGGCATCCTGCTGATCATCTGATAATCTTCAGagaTGAAAAGGATG
TCACTTCATAACATAATGAGATGTGGCCCTCTTGCCCTCTTTCTTGTTTA
ACAGAAAAGAGCCAGATCCTGCCAGAGCTTTTATTGGTAATCTGCCATCA
GTAATTGAACTCCACCGCAAGGTACTTTCTCAAGGGGTATGCAGTTACCA
CAAGACATTATTAGTAATAATCTTAACTGAGAGCTCAGAGGTTACAAAAA
TCGCTGGTTTGGTTTTAAAGATGCTAATTACTCAGACAGAAATGTCTAAG
GAACTTAAATTGACGACTTTCAAAATGAATCCAAAGAGAAATGTACTATC
AAATAATGTTTGGGATCTAacgatttttttgtgattttatagTTAAATAC
TATTTATTAATGAGGATGAAATTTGTTCGCTTTATAGCTTTATACAGTAT
GGAGCTCTAAAATGAGATGATTTTTGTCGATTATATTAAttgtatttttg
acaaaatcataTGCCCATAGCAAAAACTTTCATagtaatataattttttt
ttcctttgtaCATTAGCTGTTGTCTGTCATAATCTTATTATATTTATTAc
ccacttttttgaaaaattctcttTATAGATTCTCAGAATGTTTCTTAATA
ATGTTATTCCTGAA Run BLAST on NCBI transcript from alignment at sc0001911:32026..34388- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038710 ID=TCONS_00038710|Name=TCONS_00038710|organism=Clytia hemisphaerica|type=transcript|length=2363bp|location=Sequence derived from alignment at sc0001911:32026..34388- (Clytia hemisphaerica)
GTTGTGCATAGCACTCCTTATCACACGCCTAAATTACTAAAATTAAGGTT
TTAGGAGTGTGATTGACCACACGCCTGAAATTTTCAAATGATGCAGCCTG
CTTTAGGTATCAGTAACACAGTTGCATAGATAAAAACTCAGTTTGCGGCT
GATGGGGCATCCTGCTGATCATCTGATAATCTTCAGGTAATTTCATTACG
TAATCTTTATGTGCTTAATTATTTAAGTCATAATGGTGTCGTCCTTAGAA
AATAGTCTTTAGGCACGCTAAGCAGTCTCCCAAATTAGCAAAAAATAATG
ATCCCAGGAGAGTCCTCGCATCGATTCTTGTATTTTCATACATTGGTTTC
GAAATCTTCAGAAAGCAATTATTTAGGTGTTGGGTAGAATGTAAATGACT
ACCAAGGCAAAGGTTTTTTCAATCTGCGGAAACGTTTAGACGGGGGTATG
GTGGTTCTGTTATNATTGTGAATGTTTTCTGCACACCACGCTGAAGCTCT
AAAGGGATGTGTGAAAACAAACAATCTGACGAATATGCAATCTCGAAATC
GTAAGGACCGCGTTCGTCTAAAAGGACTGGGAATGACAACAAAGTTGCGC
GATTGTGTTTATGAATAANNTTTCCGCGGGAGGACTATTTTCCTCAGATG
TATAATTTTCAAGTGCCTTTAGAGGTTTACCGTGCGCGTAAGAAAATTAT
GAACATCTGTTATCAGGTTAGGGGTATGGTGGTTCTGTTATTATCAGTTA
GGGTCAGGGTTGGACTCAAAGGTATTTGTTTGTTTCGATTACTGCTGTGT
CTCGTTGGCGCAACCAGTTAGGCTTCGAGTTTGGAAATCAAGGTTGCTTG
CATTTGGTGGTTCGAGCCAAGGTAAGGGAGTATATTTCAGAAATAGGTTA
AAAAAGTCAAAATATAACTTAGAACAGTTCAAAAACTCAGAATAACATCA
GAAAGTAGAATGGAAGATAGGAAATAGAGAAAGTAGAGAAAATCCTGGAG
AGTCATTTAGAATCTACCCACGACCAATTATTTATGCCTAATGACTCTTA
GGGGACTTCTTTTTTTGTTTTTTTTAGAGATGAAAAGGATGTCACTTCAT
AACATAATGAGATGTGGCCCTCTTGCCCTCTTTCTTGTTTAACAGAAAAG
AGCCAGATCCTGCCAGAGCTTTTATTGGTAATCTGCCATCAGTAATTGAA
CTCCACCGCAAGGTTTGATCAAGTTTGTGTAGTCCCAGGAGGTGCAGTCA
CAGGAGGTAGGAGCTAGGTGGTCGTTTCTAATTTAATTTGGAAATTCCAA
AAACTTAAAATACCTGGTATTAAATTAAGGGTGGGGAGGACATCAAATAT
ACCATTTTAAAACTATTGCATGCTACTAAATTTAGGGTTGAGAGGGTATT
TATTTCAATTCTTGTTAGTATATATCCCAATTCCTGAATATAACATTTTG
TCAATTTTTGTCTTGATGTTGCAGGATTTTGATGAAAAGAAATTTTTATA
CATGCTTGGTACAGTGTTTTGATACTGAAAATATAAGTTTCTCCATTTCA
ATTCTAGGTACTTTCTCAAGGGGTATGCAGTTACCACAAGACATTATTAG
TAGTATGTGTCTTTTTGAACAATTTTTTATTACAACCCCCTTGCAGTTTA
TACTACCATCTGTTAAATCTTTTTCAATTATAACTTTGTATGCAATGCAT
GCTTAACCCCCTGCTCTCCCTGCCTTTTCAATAATGTAAAGCAAGTGCCC
TAGTTTTTGATTTTGTCTAATATTTTCAAATTAGTTTGCAACTTTTTTCA
TTTCATTTCATTGCAATTTTTTGTCCCACTAAACAATGTTTTCTTTCAAA
AATACAAAAATGTTTTTGCGATCTTTTTATTATTCTTAATGTCTTACTGC
ACTTTTCTTTTACAGATAATCTTAACTGAGAGCTCAGAGGTTACAAAAAT
CGCTGGTTTGGTTTTAAAGATGCTAATTACTCAGACAGAAATGTCTAAGG
AACTTAAATTGACGACTTTCAAAATGAATCCAAAGAGAAATGTACTATCA
AATAATGTTTGGGATCTAACGATTTTTTTGTGATTTTATAGTTAAATACT
ATTTATTAATGAGGATGAAATTTGTTCGCTTTATAGCTTTATACAGTATG
GAGCTCTAAAATGAGATGATTTTTGTCGATTATATTAATTGTATTTTTGA
CAAAATCATATGCCCATAGCAAAAACTTTCATAGTAATATAATTTTTTTT
TCCTTTGTACATTAGCTGTTGTCTGTCATAATCTTATTATATTTATTACC
CACTTTTTTGAAAAATTCTCTTTATAGATTCTCAGAATGTTTCTTAATAA
TGTTATTCCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038710-exon-sc0001911-1575043694:34203..34388 | TCONS_00038710-exon-sc0001911-1575043694:34203..34388 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1575043694:33177..33311 | TCONS_00038710-exon-sc0001911-1575043694:33177..33311 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1575043694:32787..32831 | TCONS_00038710-exon-sc0001911-1575043694:32787..32831 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1575043694:32026..32473 | TCONS_00038710-exon-sc0001911-1575043694:32026..32473 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1510915933:34203..34388 | TCONS_00038710-exon-sc0001911-1510915933:34203..34388 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1510915933:33177..33311 | TCONS_00038710-exon-sc0001911-1510915933:33177..33311 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1510915933:32787..32831 | TCONS_00038710-exon-sc0001911-1510915933:32787..32831 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1510915933:32026..32473 | TCONS_00038710-exon-sc0001911-1510915933:32026..32473 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1491911889:34203..34388 | TCONS_00038710-exon-sc0001911-1491911889:34203..34388 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1491911889:33177..33311 | TCONS_00038710-exon-sc0001911-1491911889:33177..33311 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1491911889:32787..32831 | TCONS_00038710-exon-sc0001911-1491911889:32787..32831 | Clytia hemisphaerica | exon |
| TCONS_00038710-exon-sc0001911-1491911889:32026..32473 | TCONS_00038710-exon-sc0001911-1491911889:32026..32473 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001911 | supercontig | sc0001911:32026..34388 - |
Blast
The following BLAST results are available for this feature:
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