TCONS_00038008 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038008
Unique NameTCONS_00038008
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2754

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038008 ID=TCONS_00038008|Name=TCONS_00038008|organism=Clytia hemisphaerica|type=transcript|length=2754bp
ttaaggaTGAATACTAAAAAATCAAAGGTTACTGCTGCATCATTTGGATC
TTTTCTTCTTCAAGCTggtgagaaaaagaaaagaaaaaaaagacgtCCAT
TGGTAATTGTTTATGAAAGAGATCATGAAGGGAAGAAGAGTgtacaaaaa
taataaacgcTATAAAAGAAGAAACCAAGCTGAATATTCCGACCTTGATA
CTGTAACTTGTGATGACAGTGAAATTGAAGGTCGATACGAGTTACAGAAA
TTACTTTGTCTATGCTCCCTATGTAATTTCACATTCGACCCATTTAATGT
TTCAACATTGATATCATGTGGGTACTGATGGCCTTGTCATCTTGAGTTCT
TCCTATATTATTAAAGAAGAAGTCTTTCTCAATTGGGATGTGTACAGAAA
AAGGATGCCAGGCAGCTCACAGAAATCGTTTTTGGATTCATTGAATGATT
TGACAAGTCATTTTGGACGAGTTGGTTCAATTTATTCTCATCCATTTGAC
ATTGTTTTCCGAGAGTGGTTTAATGTGCAAGCAGAATATGATACGTTTAC
AGCACATACGCTGGTTTGAGTGTCCTTGTTGTAGCGTTGCTCAACACAGT
TGCCATGTTGATGGCAACTGTAAACTTAAAAATAAATGGCTCCCTTTTTC
CACAGAAGCCATAGTCAATCTCTGTATGGTGATATGTTTATTGTGGATGA
CAAAGATGTAAAGACTTTCATCGAAAAGATCTATCACTCCAAAACTAAAT
ACAAACAAAATGTtggaagaaagaagaaatcaCTTGACGAGACAGGGCTG
GAAGTAGCCACGTGTCGACATGTAATCGCACAGAAAGCAATAAATATGAA
ACAAGgtgaACAATATGGGTATGCACTTTATCTCATGAAACATTACATGG
TTAAGTGGAAAGTAGAATATTGCTGGGCAGATGTCATGTGTAAGTTGTGG
AAGTTTGCTCAAAGGATTGATCCGGATATATGTAAATTAATGAAGCCAGC
CTTATCAACAATGCATGCTAAAGGACATAGCATACAATGCcagGACGAGA
GGAAACAATTACAGAGCATGCGATACATTGGAATCGGATTAAAATTGAAT
CTCTAGTGCAAAGTCTTGTGAAAAATTCAAAGGGGTAGAAAGAGAATGGG
AAAATGCTCGGGAAGATTTTTCAACTCATGCTAAAAAGACGAGAATCAAT
ACAAACAACATGCCAGCTATCGTGGAAGATATCAAAGCTGCTGCACTTCC
AGATAAATGTAAAAGAAGATCCGTTTACCGTATGCATAATTGGCAAGTGC
ACCAATGCTATCAAAAAGAATTTGGTCCTACTTGAATGCACCAGAGGAAG
TAAGatcaatgaaaatgaaaaacttaaaatataCCAAAGAAGTTTTCCGT
GGATCTACAATCAAACCAACTAAAGGTTACAAGccgaaGATAAAAGATTA
CTCGCTGAACTGTACATGAAGATAAAACGATCTGAAGAAGAACTCGATCT
GAAGAAGAACTCGATCTGCTGAAACGAGACATGAATAGATATTTGTCGTT
TTatcgaacaaaaattactgAACTGGAATATATCATAGAGACCGAATCGA
ATAATGCAGTTGAAATTATTATGGCAAAAAGACGCTTGAGTTTTGCACAA
CATCAACTCGCTGACGGTGTTCAGTATTTTTCCACAATTTTTAACGCCGG
ACATTCGATTCCGATAGAATTTCGAATTAATTTTGAAGACGATGAAAATC
AACAAGTGGAAGAAGAAACTTTTGTTCCTCAAGAAGATTTGGTAATTCCG
CTGCTGAGTCATGATATGTTGAAAGACCTGGCAGTAGAGGTCTCTAGCAA
TTTCAACATAGATGATTGTTTGATGAGTATTGATGGAAATGTTAGTAGCC
CTTCGATCTCAGTCAAGGAGCAATCGGTGGTCGAAACGGAAGCTCTGCAT
GTACCGTGATTTCACTTTAACTGGTTATTATGAGACGAGCTCAAAGTGTC
ACTGATAAAGTTTTAACTTTTGTCTTGATTTCAAATGAAATCTTATGCAT
TCATCAGAGAAAgtaatgaagatttttttttttcgattcccACGCGAGCC
CACCTAACGGTGCATGTGTTTATATGGTACCGGTTGAACACTTCGATGAA
TTTATGAGAGAAATCTTTAAGGAACAATATGTGAATATTGGAGTCTTCAC
ATGTCAATAACttctttatttttacataatatAGTAAATTCATCCAAACT
TTCTGGTTTAGAACCTTTtgcaaataattattttgatctttttgtgtGCG
TATGACTTAATCCAGGTTTTTTAATCGATTTTTAGTAGAAAACAAGAATT
TATTTAAATCTTGATTTATTTCTGtgctcattttctttttcgtaaggaaa
cttttataagcataattaAGCTGAAACTTAAATCGATCATGACTGCTAGG
CATACCTTTAAGCACAATTGCTAAAGTTTTGTGAAACGAAATGAAGAACA
CCGAAATTTGCCCTCACAAACGGGTGTTGCCTTTAGGAAAAATGATGCAA
TCTAACATTTACATACCACAAGCATCCCCCAATAAGTTTTTCATGGTTTT
TGTATTAtgaatttttcaattattttataCCCTGTACCGAAAATACAGTA
ATTTTCTTTTAACATAATGGTGGACATAATATTTGATACAAATTTGCAAA
GCACaaataatttgaatttgctgtaaCTTATGGTTTGAAATATATAGTTT
TAAC
Run BLAST on NCBI

protein sequence of TCONS_00038008-protein

>TCONS_00038008-protein ID=TCONS_00038008-protein|Name=TCONS_00038008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
MAPFFHRSHSQSLYGDMFIVDDKDVKTFIEKIYHSKTKYKQNVGRKKKSL
DETGLEVATCRHVIAQKAINMKQGEQYGYALYLMKHYMVKWKVEYCWADV
MCKLWKFAQRIDPDICKLMKPALSTMHAKGHSIQCQDERKQLQSMRYIGI
GLKLNL
Run BLAST on NCBI

transcript from alignment at sc0001757:24880..32899-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038008 ID=TCONS_00038008|Name=TCONS_00038008|organism=Clytia hemisphaerica|type=transcript|length=8020bp|location=Sequence derived from alignment at sc0001757:24880..32899- (Clytia hemisphaerica)
TTAAGGATGAATACTAAAAAATCAAAGGTTACTGCTGCATCATTTGGATC
TTTTCTTCTTCAAGCTGGTGAGAAAAAGAAAAGAAAAAAAAGACGTCCAT
TGGTAATTGTTTATGAAAGAGATCATGAAGGGAAGAAGAGTGTACAAAAA
TAATAAACGCTATAAAAGAAGAAACCAAGGTACATCAAATCCTCAAAATG
AGCCCGTTTGTGATTGAATTTTTGATTTTTTAGTTTGCCACCCGATGTTC
CCTCATCTTTCAGCTGGTGGTCATGGCAACAGACATTCTCAAACTTTCAG
AAGTTTACTTTTCATTATTACCAGGACTGTGGAAAAAGATATTCTGCCAT
GTAGGATCAGTAGGCTTTTTTATATTAACAAAAGCATAGGGTTCCAGGTT
CCACCTTGTGAGCAGATTATCATTATATAATAAAAAGGATACTTGATATT
ACACACTATTAAGTAATATTCATGCCAACCCCCCCCCCAAATTGTGAATT
TTTTAATTTTCTAACCAACCCTCGTGTGCTAGAGCTGTCTCTTAATAAGT
CACATTCCTTCAGGGTAGTAATGCAATTATTGTATATGAATAACCTGAAA
ATTTCCTTCGCTTCTATAATTTCTTTGTTGTGTTTTTGATGTATTTGTCA
AATGATTTATTAATAAAGAACATTTTTTGCAATTTCTTCAAATCAGCTGA
ATATTCCGACCTTGATACTGTAACTTGTGATGACAGTGAAATTGAAGGTA
AAAGTTTTACACATTTTAAAGAAGATATTTTTATTGTACCGGGTGTCCCA
GAAAAAAGTTCTGCTCTTTGAAGTGAATTTTCTAAAGTCCTATGAATTTG
TAACAATCAATAATTTTGCATTGGAAAGAGGAAGGATAGTGTTTACAACT
TTTGGTTTGATTTTCCCCAAATTTTAGTCAAAATTTCTGGAAATTGTGAC
CCTTTGAGAGAAATTTTTTTTGATATTTGTGATTTTGGGACAGTTTGGGA
CCCTTAAAAATTTGTACCCCTTTGAGAAATTTGAGGCATTTAAAAAATGT
ACCCTTATGGCTCGCACATATCCGACACCCATTTTGCCTAAGTAGTGTGA
ATAGATATCGGAGAAATTCTTTTCTGAGGTTGCGGAAAGCTTCAATTTTC
TAAAAGACTTTCAATGGGTGAAATTGAAAAGAGGCAAATCGAGACAATAT
GAAAATCAGGAGGCTTGGAACGAGCAAAAGACTATTGGACTCAAAGTTAT
CTAGAGAGAGAATTTGTGAAAAATTCTTGTTCGAAATGCAATACTTTGAA
CGCATTGATCTTTTGTGGAGATTGCTGGTCTTTTTTTTGTTCTTTGTGTG
ATGTGAATTTACATTCAAAGCATACTTTTCACAATCGGAAAGCATTATTG
AATGGATTTTTCAAGCCAATTTCTCCAAATGAGTATATAGCCGACGATGG
TATACAGATAGGGAGTAAGTAAAATGGCGAAATAGTTTTTTTATCAATTT
TTCCTTTTTGAATTGAAGTCAAAAATGATTAAATGAAAACCTCACTCTAT
TTTCTGAGTTGAAATCAATGATTTTAGTACAATATTATTAATTTTTATAA
TTATAGCTAGACGTGTACCATTAGTCATTTCTAAATGCACAGCATGCAAC
ACTGCAACTTATAACTTCGAAATGTTAGATGTCAACGAAACATGCATAGT
TGTTACAAACAAAGGTCAGTAAACTATGAAAACTATGAAAATTTTTAATA
TAGTTCTGTGCAGCTCAGTAATTTAGACTTTTTGTGTAATAAGTAGGCTT
TTTCATAAATTACGTCCTGAACAAACAACACTTGCCTCGTTATTCCTATG
ATAACTGATTGCCAGAGAAATTAATCTGTTGTACGTTTGGCACTTTCAAA
ACAAGCCAGTCATACAAAATAATGTATGAAAAGGCTTATTGTTTTGAAAC
CATGTCATGTTCTTGTTTCAGGTCGATACGAGTTACAGAAATTACTTTGT
CTATGCTCCCTATGTAATTTCACATTCGACCCATTTAATGTTTCAACATT
GATATCATGTGGGTACTGATGGCCTTGTCATCTTGAGTTCTTCCTATATT
ATTAAAGAAGAAGTCTTTCTCAATTGGGATGTGTACAGAAAAAGGATGCC
AGGCAGCTCACAGAAATCGTTTTTGGATTCATTGAATGATTTGACAAGTC
ATTTTGGACGAGTGAGAATACATTTTCTGAGAGTTTTTTTTAAAATACTG
TATTGGTTTCAGTTTTTTTTCTTTAACAGCAGGATTTGCATTAGATTGTT
ATCCTACAAAAAGTTTATTTTAAAGAATCTGCAGAATATTTTTACCATGT
CACTTTCATCACGTTTTAGGTTGGTTCAATTTATTCTCATCCATTTGACA
TTGTTTTCCGAGAGTGGTTTAATGTGCAAGCAGAATATGATACGTTTACA
GCACATACGCTGGTTTGAGTGTCCTTGTTGTAGCGTTGCTCAACACAGTT
GCCATGTTGATGGCAACTGTAAACTTAAAAATAAATGGCTCCCTTTTTCC
ACAGAAGCCATAGTCAATCTCTGTATGGTGATATGTTTATTGTGGATGAC
AAAGATGTAAAGACTTTCATCGAAAAGATCTATCACTCCAAAACTAAATA
CAAACAAGTATGGTTAATTTTGTAAGATGAATATAAAGTATTATATTCAA
AATAATATGTTTTCAATATAATGATACAAGGCACAAGAAATTTTTATTTT
AGTACATTTATTATTCAATATTCGTTTGTTGCTGATTTATGATCTTCAGG
AGAATGACAATATTTGTGGTGGTTCATGGACTGCTGCCAAGAATGTTGGA
AGAAAGAAGAAATCACTTGACGAGACAGGGCTGGAAGTAGCCACGTGTCG
ACATGTAATCGCACAGAAAGCAATAAATATGAAACAAGGTGATTTCTGAA
TAAAAATAACTGTTCTATTTTTATCGTTTTCACTTTTTGTTTCGTATATT
GGTATCGCTTTACTGAAAAATCATATTTTTATCAATATTTATTTTTTTTA
AAAGGTGAACAATATGGGTATGCACTTTATCTCATGAAACATTACATGGT
TAAGTGGAAAGTAGAATATTGCTGGGCAGATGTCATGTGTAAGTTGTGGA
AGTTTGCTCAAAGGATTGATCCGGATATATGTAAATTAATGAAGCCAGCC
TTATCAACAATGCATGCTAAAGGACATAGCATACAATGCCAGGTTTTTAT
TTTCATTTTATGATATATTGTATTTTACATACTAACTAACATGAAAGTGA
AGAGTCTGTACTCATAAAGAAGGGTTTGTACGACTCCCTTATTAAATATT
TATTCAAATAGTTTCAAAAATATTTCTTCTTTAAAACCTTCAATAAGAAA
ATTTTGAATATTCTTAAAAGAAAGTGAGCAAAATTTCCCAAAAACCTACT
TCGGTGAAAAACATTGTTTAGGTTAACATTCTTTTTTCTTGCTTTTTGTA
GGTAAATTGGGATGGGTTATGGATAGAAGGAACAGGCAGGTCGACAGGAG
AAGAAACTGAGCAATTCTTTAGTTTAGATGTCGAAATACAACCAAATATC
AATTTCCTGAAAGTAAGTACCGGGTGAACCACGAAAAAGTATGAGAGTTT
GGCAACGTGGTGCGGCCAGGACAGTGTGATTTTTGGAGAAATTAAGTACT
TTCATTGATATTTTTCTGAATAGAATTGCTCAAATTTAATACCCTCTTTT
TCACGTTGTTTGATGCTTTTGTAAAGTGTTGATTTTTACCTATTATTGCA
CATTCAGTCGTACAATTAACGATTACATTAAGGGAATAAATTAATGCAAG
AAATAATTAAAGCGGAACTAATTAATGCCAATTTAAATTTATGGGGTGTC
ATTCGCATTAATTTATTCCGCATTTATCAATTCTTGAATTAAATTATTCT
CTTAAGGTAATCACGAGTAACAATGAGAAAACTGTAATTTGTCCGAGTTC
GTAAGACGAAAGATTTACTATCCGCAAAATTTTAGTACAGCTAAAACGAG
ATTGAATGAATGATGAAGCTAATACCAAATAAATATTTAAACTTTATAAT
ATTTTTATTTTATGCTATTAGGACGAGAGGAAACAATTACAGAGCATGCG
ATACATTGGAATCGGATTAAAATTGAATCTCTAGTGCAAAGTCTTGTGAA
AAATTCAAAGGGGTAACGCTTGTCAATGTAATTTCTTGATGTTCCAAATG
ATTTGTCGCCTTCTTATTCCCGACATCTTACTTTCATTTGATCATTTTTG
ATTGGTCAGCAATCGGTAATTTTGGACTAACCTTCTTAAAAATATATATG
TATATTCTATTATTTGCGTACTCAGCCTTTTAAAACAAAAGAAACAACAA
TTAACTCTCCTGCACTTACCACAGGAAAAAAATGTTAAAAGTACAGGCCT
GGGTTTGGTATGGGAAAATGGAACAACCTTAGCCATTTTCCAGGCCTCAG
TTTTTTTCGGGGCCGGAAAAGACCAGTTTCCAAGCCTGTGATTTTTGTTC
AGGTTTAGGAAGTGGTCATTTGCGGCCGCGAAAAAAAACAAGGCCTGGGA
TTTTAACATTTTTTCCGAATACGGCACGCTCCTCAAATCTATTGTTAGAT
CTGTTCCAACATATTTCATCTCTATATCATAAAGAATATTCCCTTTAATA
CTATAAATATTTGTTGCTCTCGATCTTAACTATCGTTTTGGCATAATTTA
TATCTATAATTTGGTTTTCAGGTAGAAAGAGAATGGGAAAATGCTCGGGA
AGATTTTTCAACTCATGCTAAAAAGACGAGAATCAATACAAACAACATGC
CAGCTATCGTGGAAGATATCAAAGCTGCTGCACTTCCAGGTAACATATTT
TTGGATATAATTGAGTTCCCAGTTTGAATATAACTGAGTTATAATCCAAT
TTGAAGCACTCAAGGAAGATGAACAGTTCGTGTTGGTCTTTATGGATCTG
AAGTCTCTAAAATCGAATTCAATCAACTCGATACCAGCAAGTTCTTTACA
AAATACGTGTGTAATGGGCTCGAAGGGTTCGATGAATTGAAAATTATTCC
TGGAACATTAAAGGCAAAAGAATCTCTTTTGGAAAGATTGGCCAAAATTG
CATATGTAGATATTGAACAAAGTATCTCCTTGACCATCACTGAAAGAATC
ATTCCGAGAATTCAATCTGAAATCCAAAAGCACTTTTTTGATAAAGTCTT
TTGGTCAGCGACTTTGAAAAAGCGTGGAGGTATTAAACCGTTTAACAAAC
CCTCTTAAAAACTAAAACTATTCTCAGAATTAGATCATATTTGAACCAAG
AGCAGGCAGACTTAATATTTAATAGTTTTATATTATCTACTTTTAAGTAT
TGCCCTCTCATTTGGATATTTTGCAGTAAGATGACCCACAATCTTTTCAA
TGAACTCATTACAGAGCCCTTAGGGCTAAACAAAATCTTCTCCATCTTAA
TTATGATGAGCTTCTGGTCAAAGCAAATTGAGTATCAATTCATACTCAAA
ATCTCCAACTCATGCTAGTGGAAAATTGTAATAAGAGTGTCAACAATATT
GGAAATAAACTAGGCTGGGACCATTTTGAAATTATCCAGCGAGAAAGCAG
GGAGTGATGAGGATATGTTACTTTCATTTTAGATAAATGTAAAAGAAGAT
CCGTTTACCGTATGCATAATTGGCAAGTGCACCAATGCTATCAAAAAGAA
TTTGGTCCTACTTGAATGCACCAGAGGAAGTAAGATCAATGAAAATGAAA
AACTTAAAATATACCAAAGAAGTTTTCCGTGGATCTACAATCAAACCAAC
TAAAGGTTACAAGGTAAAACTTTAAGGAGTTACTTAAGATAACTTCCTTA
AACAATTTATTACTACGCCTCTATACGGTAAATTGGGAAACCTTCACTAT
CAGCCTATCAGTTCTACCGATTAAAGTGTTGGAATCTAACCTATAGGGAG
ATCGATTTTAGAGACGGGTTTATTCATTGTAATTCATTCAGTGTGTTCAG
TGTTATTTCATTTCGAAAATCTCAGTATTTTGGAAGAAGTACTTCTTTTT
TTAAGCATCAAAGTCATTTATCATCTACAGTAAAACGTTTTTTACAGCAA
TGTTTTAAGAGCAGTGATTATTTTCTTTTTTTGATTTTTGAAGCCGAAGA
TAAAAGATTACTCGCTGAACTGTACATGAAGATAAAACGATCTGAAGAAG
AACTCGATCTGAAGAAGAACTCGATCTGCTGAAACGAGACATGAATAGAT
ATTTGTCGTTTTATCGAACAAAAATTACTGAACTGGAATATATCATAGTA
AGTATCAGAATTTGTCTTGTGATAGGGGATGTATATCTTCTAAATTAATC
TTGTTCAAGGTTACTTTTATTAAAAAAAGGGTAGTCTAACTTAAAGTCAA
AGACGTGACTTTATGTCAATTGACGTCAAATTCCAAGTAGAAAGTGATGG
ATTTATCGATCTTTGAAACGTCAAATTACTCGAGTTACATCAAGAATTCG
GTGATATCCGCTGAAAAGTCTTCTATATATTTTTTTGAGAGCTTTCGAAT
GGTATAAGTGTTTAGGCTTTAGCGACTTTGAATTTCACGTTTTCCTGGGG
TTGGAAATTTAGCTTGGAAACCGCAAAAATCGTTGCTATGACGTCACTAG
GGCCGCCAAGTTTTTGGCACCACTTTTAAATCATATCTTCTAATGGTGGA
TGACATCTGTTTGGTAGAATATTCACAATTTGAACCATTCGACCCTTATC
GACTCTACTAATCGTATGTAATTCATTTTTCCTCCTAATTTATATTTCCC
CAGGAGACCGAATCGAATAATGCAGTTGAAATTATTATGGCAAAAAGACG
CTTGAGTTTTGCACAACATCAACTCGCTGACGGTGTTCAGTATTTTTCCA
CAATTTTTAACGCCGGACATTCGATTCCGATAGAATTTCGAATTAATTTT
GAAGACGATGAAAATCAACAAGTGGAAGAAGAAACTTTTGTTCCTCAAGA
AGATTTGGTAATTCCGCTGCTGAGTCATGATATGTTGAAAGACCTGGCAG
TAGAGGTCTCTAGCAATTTCAACATAGATGATTGTTTGATGAGTATTGAT
GGAAATGTTAGTAGCCCTTCGATCTCAGTCAAGGAGCAATCGGTGGTCGA
AACGGAAGCTCTGCATGTACCGTGATTTCACTTTAACTGGTTATTATGAG
ACGAGCTCAAAGTGTCACTGATAAAGTTTTAACTTTTGTCTTGATTTCAA
ATGAAATCTTATGCATTCATCAGAGAAAGTAATGAAGATTTTTTTTTTTC
GATTCCCACGCGAGCCCACCTAACGGTGCATGTGTTTATATGGTACCGGT
TGAACACTTCGATGAATTTATGAGAGAAATCTTTAAGGAACAATATGTGA
ATATTGGAGTCTTCACATGTCAATAACTTCTTTATTTTTACATAATATAG
TAAATTCATCCAAACTTTCTGGTTTAGAACCTTTTGCAAATAATTATTTT
GATCTTTTTGTGTGCGTATGACTTAATCCAGGTTTTTTAATCGATTTTTA
GTAGAAAACAAGAATTTATTTAAATCTTGATTTATTTCTGTGCTCATTTT
CTTTTTCGTAAGGAAACTTTTATAAGCATAATTAAGCTGAAACTTAAATC
GATCATGACTGCTAGGCATACCTTTAAGCACAATTGCTAAAGTTTTGTGA
AACGAAATGAAGAACACCGAAATTTGCCCTCACAAACGGGTGTTGCCTTT
AGGAAAAATGATGCAATCTAACATTTACATACCACAAGCATCCCCCAATA
AGTTTTTCATGGTTTTTGTATTATGAATTTTTCAATTATTTTATACCCTG
TACCGAAAATACAGTAATTTTCTTTTAACATAATGGTGGACATAATATTT
GATACAAATTTGCAAAGCACAAATAATTTGAATTTGCTGTAACTTATGGT
TTGAAATATATAGTTTTAAC

Coding sequence (CDS) from alignment at sc0001757:24880..32899-

>TCONS_00038008 ID=TCONS_00038008|Name=TCONS_00038008|organism=Clytia hemisphaerica|type=CDS|length=1884bp|location=Sequence derived from alignment at sc0001757:24880..32899- (Clytia hemisphaerica)
GACGAGAGGAAACAATTACAGAGCATGCGATACATTGGAATCGGATTAAA
ATTGAATCTCTAGGTGAACAATATGGGTATGCACTTTATCTCATGAAACA
TTACATGGTTAAGTGGAAAGTAGAATATTGCTGGGCAGATGTCATGTGTA
AGTTGTGGAAGTTTGCTCAAAGGATTGATCCGGATATATGTAAATTAATG
AAGCCAGCCTTATCAACAATGCATGCTAAAGGACATAGCATACAATGCCA
GAATGTTGGAAGAAAGAAGAAATCACTTGACGAGACAGGGCTGGAAGTAG
CCACGTGTCGACATGTAATCGCACAGAAAGCAATAAATATGAAACAAGAT
GGCTCCCTTTTTCCACAGAAGCCATAGTCAATCTCTGTATGGTGATATGT
TTATTGTGGATGACAAAGATGTAAAGACTTTCATCGAAAAGATCTATCAC
TCCAAAACTAAATACAAACAAGACGAGAGGAAACAATTACAGAGCATGCG
ATACATTGGAATCGGATTAAAATTGAATCTCTAGGTGAACAATATGGGTA
TGCACTTTATCTCATGAAACATTACATGGTTAAGTGGAAAGTAGAATATT
GCTGGGCAGATGTCATGTGTAAGTTGTGGAAGTTTGCTCAAAGGATTGAT
CCGGATATATGTAAATTAATGAAGCCAGCCTTATCAACAATGCATGCTAA
AGGACATAGCATACAATGCCAGAATGTTGGAAGAAAGAAGAAATCACTTG
ACGAGACAGGGCTGGAAGTAGCCACGTGTCGACATGTAATCGCACAGAAA
GCAATAAATATGAAACAAGATGGCTCCCTTTTTCCACAGAAGCCATAGTC
AATCTCTGTATGGTGATATGTTTATTGTGGATGACAAAGATGTAAAGACT
TTCATCGAAAAGATCTATCACTCCAAAACTAAATACAAACAAGACGAGAG
GAAACAATTACAGAGCATGCGATACATTGGAATCGGATTAAAATTGAATC
TCTAGGTGAACAATATGGGTATGCACTTTATCTCATGAAACATTACATGG
TTAAGTGGAAAGTAGAATATTGCTGGGCAGATGTCATGTGTAAGTTGTGG
AAGTTTGCTCAAAGGATTGATCCGGATATATGTAAATTAATGAAGCCAGC
CTTATCAACAATGCATGCTAAAGGACATAGCATACAATGCCAGAATGTTG
GAAGAAAGAAGAAATCACTTGACGAGACAGGGCTGGAAGTAGCCACGTGT
CGACATGTAATCGCACAGAAAGCAATAAATATGAAACAAGATGGCTCCCT
TTTTCCACAGAAGCCATAGTCAATCTCTGTATGGTGATATGTTTATTGTG
GATGACAAAGATGTAAAGACTTTCATCGAAAAGATCTATCACTCCAAAAC
TAAATACAAACAAGACGAGAGGAAACAATTACAGAGCATGCGATACATTG
GAATCGGATTAAAATTGAATCTCTAGGTGAACAATATGGGTATGCACTTT
ATCTCATGAAACATTACATGGTTAAGTGGAAAGTAGAATATTGCTGGGCA
GATGTCATGTGTAAGTTGTGGAAGTTTGCTCAAAGGATTGATCCGGATAT
ATGTAAATTAATGAAGCCAGCCTTATCAACAATGCATGCTAAAGGACATA
GCATACAATGCCAGAATGTTGGAAGAAAGAAGAAATCACTTGACGAGACA
GGGCTGGAAGTAGCCACGTGTCGACATGTAATCGCACAGAAAGCAATAAA
TATGAAACAAGATGGCTCCCTTTTTCCACAGAAGCCATAGTCAATCTCTG
TATGGTGATATGTTTATTGTGGATGACAAAGATGTAAAGACTTTCATCGA
AAAGATCTATCACTCCAAAACTAAATACAAACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022682XLOC_022682Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038008-exon-sc0001757-1575043694:32721..32899TCONS_00038008-exon-sc0001757-1575043694:32721..32899Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:32153..32203TCONS_00038008-exon-sc0001757-1575043694:32153..32203Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:30689..30928TCONS_00038008-exon-sc0001757-1575043694:30689..30928Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:30243..30530TCONS_00038008-exon-sc0001757-1575043694:30243..30530Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:29962..30058TCONS_00038008-exon-sc0001757-1575043694:29962..30058Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:29658..29845TCONS_00038008-exon-sc0001757-1575043694:29658..29845Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:28688..28778TCONS_00038008-exon-sc0001757-1575043694:28688..28778Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:28011..28128TCONS_00038008-exon-sc0001757-1575043694:28011..28128Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:27037..27217TCONS_00038008-exon-sc0001757-1575043694:27037..27217Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:26553..26706TCONS_00038008-exon-sc0001757-1575043694:26553..26706Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1575043694:24880..26046TCONS_00038008-exon-sc0001757-1575043694:24880..26046Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:32721..32899TCONS_00038008-exon-sc0001757-1510915933:32721..32899Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:32153..32203TCONS_00038008-exon-sc0001757-1510915933:32153..32203Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:30689..30928TCONS_00038008-exon-sc0001757-1510915933:30689..30928Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:30243..30530TCONS_00038008-exon-sc0001757-1510915933:30243..30530Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:29962..30058TCONS_00038008-exon-sc0001757-1510915933:29962..30058Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:29658..29845TCONS_00038008-exon-sc0001757-1510915933:29658..29845Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:28688..28778TCONS_00038008-exon-sc0001757-1510915933:28688..28778Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:28011..28128TCONS_00038008-exon-sc0001757-1510915933:28011..28128Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:27037..27217TCONS_00038008-exon-sc0001757-1510915933:27037..27217Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:26553..26706TCONS_00038008-exon-sc0001757-1510915933:26553..26706Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1510915933:24880..26046TCONS_00038008-exon-sc0001757-1510915933:24880..26046Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:32721..32899TCONS_00038008-exon-sc0001757-1491911889:32721..32899Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:32153..32203TCONS_00038008-exon-sc0001757-1491911889:32153..32203Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:30689..30928TCONS_00038008-exon-sc0001757-1491911889:30689..30928Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:30243..30530TCONS_00038008-exon-sc0001757-1491911889:30243..30530Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:29962..30058TCONS_00038008-exon-sc0001757-1491911889:29962..30058Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:29658..29845TCONS_00038008-exon-sc0001757-1491911889:29658..29845Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:28688..28778TCONS_00038008-exon-sc0001757-1491911889:28688..28778Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:28011..28128TCONS_00038008-exon-sc0001757-1491911889:28011..28128Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:27037..27217TCONS_00038008-exon-sc0001757-1491911889:27037..27217Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:26553..26706TCONS_00038008-exon-sc0001757-1491911889:26553..26706Clytia hemisphaericaexon
TCONS_00038008-exon-sc0001757-1491911889:24880..26046TCONS_00038008-exon-sc0001757-1491911889:24880..26046Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038008-proteinTCONS_00038008-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001757supercontigsc0001757:24880..32899 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39358	0.739779	0.0636834	0	1.87811	0.696967	2.1246	1.6203	1.18943	0.861139	1.16543	0.688795	0.763914	1.81156	1.88685	2.46429	3.08325	3.23875	1.62302	1.63441	1.93934	2.55484	1.43494	1.92811	0	0	1.5538	1.40692	0.656736	0.318777
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038008 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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