TCONS_00037603 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037603
Unique NameTCONS_00037603
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3396

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037603 ID=TCONS_00037603|Name=TCONS_00037603|organism=Clytia hemisphaerica|type=transcript|length=3396bp
CAGGCATTCATTTCtgttttcctttgtttgatCTTATCcatattttttcc
tctttttttcatcaattttgctgtttttctcTTTCAGAACTATgtgaaaa
tacaaaaggaagtATGTGGAGCAGACAATTAACTAGGCTATGCCGTCAAC
CCCCGATCAAGAAGGGAAGACAGCTAGTCCCTAGAAAAGAAGTTGTTATC
AGATTTCAAAGTTACactaaacaaaatttaacataCAGCTTGAAGTATAT
TTTGGGATTACTTGGAGGAACTTTGACAGGCGGTTTATctgtttatttga
tttttaaccatAATGTGGACGTGGAAGCATCTCAACCAAAGAAAAAACTT
GTGATACTTGGCTCTGGTTGGGGTGCAGTCAGTCTCATCAAAAGTCTAAA
ACCTGATTTATATGACATCAAAGTAGTTTCGCCCACAAATTATTTTCTAT
TCACACCTTTGCTACCATCTGTTACTGTTGGCACTGTGGATGGACGCAGC
CTCACAGAACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGGAAA
TTATGAATATTTNTAGCCTTACAGAACCAATCAGAAAGATTTTATCGAAG
AAACAAAAGGAGGGAAATTATGAATATTTTGAAGCCCATTGCATTGATGT
TGATACTGAGAAAAATCAAGTTATTTGTGCTGATAAATCAGATATTCAAA
GCGACAGCCCTGAGTTCAAGATTGACTATGACATTTTGGTAGTGGCTGTT
GGATCGAAAACAAACACGTACAACAATCCTGATATCAAGAAATATTCTCA
TAAACTAAAAAATGTTCAACAAGCTCGAGAAGTCCGCAAACATATTGTTG
ATTCTTTGGAAACTGCCATTTTGCCAGGTCAATGtgaagaagaaatgaaa
aggatgttgagttttgttgTCGTTGGTGGTGGGCCTACAGGAGTTGAATT
TGCTGGAGAATTGCGTGATTATCTTgatgatttgaaaaatgtttatcCTC
AACAAGTTATTGATAATATGTGCATAACTTTGGTGAATAGCCATTACAAA
GTGTTGAGTATGTATGACCAACAGATAAGCAATTTCACTGAACAGAAATT
CAAATCAGACGGTATCAACACGATTGGTAATTCTTATGTAGTTGGAATGG
ATCCAAAGAATATTAAAATCCAAAACAAGAAGACTAAAGAGATAACAGTT
TTACCGTATGGTTTATGTGTTTGGGCTGCTGGTATTGCACCTAGAGACAT
AACTAAGGCGCTGATCAAAAGAATGCCTGCACAAAACAACAGAAATGCAT
TGGTCACAGATGGCTACATGAAATTGAAAGGAAGCAATAATATTTTTGGT
ATCGGAGACTGTTCTACTGTCGAGTTTACTAAGCTAATGTATCAAGTTGA
ACAGTTATTCAAAGAAGCTGATCTTGATGGGACTGGTCAGCTATCTCTCT
CTGAATTCTCAGTATTTTTGGAGACAGCAAAGAAGAAATATCCTGAAATG
ACGCAACATTTGACCAAGTTACAAAAATCAGTTGATAAGACATTCAGCTT
GATGGATACTGACCATAATGAGCGATTAAGTCTTGAAGAGTTTACTCTTT
TCTTGAAGGATGTTGACAGCAAATTAAAAGCCTACCCTGCTACAGCCCAA
GTCGCTTCTCAACAAGGCAAATATCTCGGAAAACTTCTCTCGGCACATTC
TGAGATcactgaaaatgaagatttctcGGTTTGCAAACCCTTCGAATACA
GTCATTTGGGGAGTTTTGCTTATGTTGGGGGAGAAGCAGCTGTGTTGGAG
CTCCCTATCATTGGTACTTTCACCAACTTTGCCACCATTTGGTTATGGAG
AGGTGCCTACTTAAACCAAGCTGTTAGTTGGAGAATGCAGTGCCTTATTG
GGTTTGATTGGGTTAAAGCACACGTTTTTGGTCGAGATACTTCAGAAATT
TAAATTAGACCTGATTTATCTTCTTCTTTatattttgtcttattttattt
attctttaggGTATTTAGATATCTCTATATATTGGGGCTTACAATGATAA
GGGTTTTTTAGGGGTTTTCTTTTGTATTATTTGCTAATTTAAGAgaagaa
tttattttggtaAATGGAATTTTATGTGCATTGTTGTGATTATTTTATTG
AAatcatttgttttgttttgtagaTATTTTGTATATTTATCATCTTTAAC
ATAGCATTTATAGAtaaattatttgttttattgCTAGCACACTTTCGCTG
TACCTATTCGAAAACATCTTACTGAAAAAATATTACTGATAGTTTGATAG
CATTTCTAGTCTAGGGAATCTTCATTCTGAACATTTTTAATCTCTAATAA
TATTTTGTGTGTGGAAGATCAAAGTATGATTTATCAGAGGTGAGTATTAG
ACTACCCAGGTATCCCAAGCCAATTCTTACCAAGCTCTATACTTTTCCTG
TATACGTACCCATATCATTTTAATTGTCAGCAATACCAATTGTAGACCCT
TAGTAATCCATGCAGAAGACAAAGGGTTCGATTCTCACTCGGTTCTGTGG
TGCATTTGGCAAGTGATTGTAGCAACGCCCGGGTCAACCAATGTCATGTT
AAGGGAACTGGGTACCAAAAGATACATCAGTGTGGGGAATAATGCCAACT
GCATCTTAGGTTGTGATGTTGCTCACTTGTTCAAGCTTATTTGAGTTGCA
CAACCAATAAAGCACGACTCTAATGGTGTCTCAaggatacaccttttcga
ccgtagccgccaattgccgcacgggcatttctttgtccgctttatcccac
taaaaccgtccagTCCtattttcgcacctatagaccatagaaaaatgtgt
caaaaaaaggattgaatcgagtttagggggataattaaataattaagtga
caCGCACCTGaatacggtcgaaaaggtgtattaatgGTGGCTTTTCTTTG
TTAAGAACAACGGGGGTTTCGCCCGAAAATGCCTGCAGATAATCAGCTAA
CCAAAAGGAAGTGTAATATATTATTGACATTTAATTTATTATATTAAATC
ACAACATATCCATAGTATTAATGTATTATGTTAAATCATATCATATATCT
TTATTATAATATTGTATTATCTTATCACGGCATACACTATTTACACATTT
GCaaacaaatgttttgaaaacggTTCACCTTGGTATTCCTCTAAAAACAT
TAACATACAAttcgctaccttaattcaaaaggggttAAGTTAAGACGGTT
CATAACTTCATACTGAAGCTCTGATAAAAGTgatgtttaattcaaaagag
gccaaagtccatcatctttttacaatagaagggcctaagtccatcatctC
TTTACAataaagggcctaagtccaccaaaataagtttgttTAAGTT
Run BLAST on NCBI

protein sequence of TCONS_00037603-protein

>TCONS_00037603-protein ID=TCONS_00037603-protein|Name=TCONS_00037603-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
MDAASQNQSERFYRRNKRREIMNIXSLTEPIRKILSKKQKEGNYEYFEAH
CIDVDTEKNQVICADKSDIQSDSPEFKIDYDILVVAVGSKTNTYNNPDIK
KYSHKLKNVQQAREVRKHIVDSLETAILPGQCEEEMKRMLSFVVVGGGPT
GVEFAGELRDYLDDLKNVYPQQVIDNMCITLVNSHYKVLSMYDQQISNFT
EQKFKSDGINTIGNSYVVGMDPKNIKIQNKKTKEITVLPYGLCVWAAGIA
PRDITKALIKRMPAQNNRNALVTDGYMKLKGSNNIFGIGDCSTVEFTKLM
YQVEQLFKEADLDGTGQLSLSEFSVFLETAKKKYPEMTQHLTKLQKSVDK
TFSLMDTDHNERLSLEEFTLFLKDVDSKLKAYPATAQVASQQGKYLGKLL
SAHSEITENEDFSVCKPFEYSHLGSFAYVGGEAAVLELPIIGTFTNFATI
WLWRGAYLNQAVSWRMQCLIGFDWVKAHVFGRDTSEI
Run BLAST on NCBI

transcript from alignment at sc0001666:11610..17191+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037603 ID=TCONS_00037603|Name=TCONS_00037603|organism=Clytia hemisphaerica|type=transcript|length=5582bp|location=Sequence derived from alignment at sc0001666:11610..17191+ (Clytia hemisphaerica)
CAGGCATTCATTTCtgttttcctttgtttgatCTTATCcatattttttcc
tctttttttcatcaattttgctgtttttctcTTTCAGAACTATgtgaaaa
tacaaaaggaagtATGTGGAGCAGACAATTAACTAGGCTATGCCGTCAAC
CCCCGATCAAGAAGGGAAGACAGCTAGTCCCTAGAAAAGAAGTTGTTATC
AGATTTCAAAGTTACactaaacaaaatttaacataCAGCTTGAAGTATAT
TTTGGGATTACTTGGAGGAACTTTGACAGGCGGTTTATctgtttatttga
tttttaaccatAATGTGGACGTGGAAGCATCTCAACCAAAGAAAAAACTT
GTGATACTTGGCTCTGGTTGGGGTGCAGTCAGTCTCATCAAAAGTCTAAA
ACCTGATTTATATGACATCAAAGTAGTTTCGCCCACAAATTATTTTCTAT
TCACACCTTTGCTACCATCTGTTACTGTTGGCACTGTGGATGGACGCAGC
CTCACAGAACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGGAAA
TTATGAATATTTNTAGCCTTACAGAACCAATCAGAAAGATTTTATCGAAG
AAACAAAAGGAGGGAAATTATGAATATTTTGAAGCCCATTGCATTGATGT
TGATACTGAGAAAAATCAAGTTATTTGTGCTGATAAATCAGGTTGAGTTT
CATGtctttatctttttcatttgttgagTTCCCTTCACTTCGCAGACACC
CTTAGATTATAAAGCCTACCCTGTTTTGGATTTTGTTGATCTAATTGATT
TGACCACGTTATTGTTATTGCTGTGTAAATTGAttggctgttttttttct
ctttgaaGCGTAGCATgatcaaaatttacattttgttAGATATTCAAAGC
GACAGCCCTGAGTTCAAGATTGACTATGACATTTTGGTAGTGGCTGTTGG
ATCGAAAACAAACACGTACAACAATCCTGATATCAAGAAATATTCTCATA
AACTAAAAAATGTTCAACAAGCTCGAGAAGTCCGCAAACATATTGTTGAT
TCTTTGGAAACTGCCATTTTGCCAGGTCAATGtgaagaagaaatgaaaag
gatgttgagttttgttgTCGTTGGTGGTGGGCCTACAGGTTTGTTGTGGT
TCTTGCCAATCAACTTTTTCCTATTAGCGCTTTTATACTTAATATTTTAG
ACAGTCATCTGATTTCCTCCTAGCTTACATTGTTCTATTCTACTTAAATT
CTACTATTCTATTCTACTTTTCTACTTTTTCAGGAGTTGAATTTGCTGGA
GAATTGCGTGATTATCTTgatgatttgaaaaatgtttatcCTCAACAAGT
TATTGATAATATGTGCATAACTTTGGTGAATAGCCATTACAAAGTGTTGA
GTATGTATGACCAACAGGTTTGTAAACATACCAATTTAAAGTTCTTGTGT
CCATGACTGAATATCGTCCCATTGAAGTATAGAAAGATGCTTctctgtct
caaaattctgcataatttaccaaaattttataaacatgtgctaattttct
ttttgaaatccaTTGTCTAAAACAAAAAACCTTGCTTTTACCACTGACAT
ACATAAGTCTTTAGCTTTCCAATTACGTCATAGCCATTTGGTcccaaaat
catttttcatatAATAGCCTTTGAGTGgactttttaaagaaaactgcTCA
TACCTGTCATTTAATCTATCAAAAAACTATATTGTCAGAGATTActtcat
tttcattcagtttAATCTAATACTGCTCAAGTTTCTTCAAAAATGTCTTA
CCAACTTCTTTTCAGATAAGCAATTTCACTGAACAGAAATTCAAATCAGA
CGGTATCAACACGATTGGTAATTCTTATGTAGTTGGAATGGATCCAAAGA
ATATTAAAATCCAAAACAAGAAGACTAAAGAGATAACAGTTTTACCGTAT
GGTTTATGTGTTTGGGCTGCTGGTATTGCACCTAGAGACATAACTAAGGC
GCTGATCAAAAGAATGCCTGCACAAAACAACAGGTTAAACAATTATATTT
GCTCTGTCTTTATTTAAACAGCCATCCTGTCATCAAATACCACTTATACT
AGCATTGTTTTACTCaaacttttttggacctaccccggtggaggtcctat
aaattaacctttgtccgttcgttcgtttgttattagctttcctcatgatt
ggctcattagttttttctgattttttgcgcaaagatgcataactataaac
cctcgaatgtgacggagcccgattttcaaaaaaaaaattttttgggcaaa
tttgggccaaaaaacggctaaaaacgggttttttggacttcgtgaaaaat
taggtcgttaattttttctgattttttgcatggaagtagggtaccatcgt
aagtaaaagatggcttaagcagatttttgcaaaaaaaatttgttggctca
aaaaacgcatgtttatctataagaatcactattaataagcatacatcaat
gttcttagtcaaattactcaatttttttatgagatagatgtttttttttt
gctcaggagggcttacttttacaaaatatgtgtgtttagacatgaaattt
tggttgcttggcgtgtttttataggaaaataggccaaattcgatattctt
ttataagcacattatcaattacttaggtattagctcttctcgagattggc
tctttcattctttatgattttttgagcaaagatgcataactataaaccct
cgaatctGACAAAAGCGACATACATCTTTAGTTATACTGTTTCTTATTAG
AAATGCATTGGTCACAGATGGCTACATGAAATTGAAAGGAAGCAATAATA
TTTTTGGTATCGGAGACTGTTCTACTGTCGAGTTTACTAAGCTAATGTAT
CAAGTTGAACAGTTATTCAAAGAAGCTGATCTTGATGGGACTGGTCAGCT
ATCTCTCTCTGAATTCTCAGGTTAGAGGGAAATATTTTGTACTGTACTAG
AACACTAGAAGTACAATACAGTTTAGCCTTACCCAAACAATACCCTCATT
TATCTATCTTATTTggttttgtttggttttgttgttcAATGATTTAATGC
agaaccactgacctttatatatccctggaccaaaaaattggtaccctaat
cgCGACACTACTCAAAAGTggtgaaaatgcatcgagagcgctggatctac
tttccctcaaaTACTTTTTATGATAGCGCTGTTatgacgttaatttttaa
aatttcaatggtttcttctcgggtaccaattccaaaaaaaactccaatca
aagatggtggatatagcttggtccatgGATATTTAATGGTCAGTGTGCAG
AACCTGTTATGACAAAGGTTTTTAAACAATTCTTTAACGTTAAGCAATGT
CAAGTACTAACACCTCTTCTTTTCAGTATTTTTGGAGACAGCAAAGAAGA
AATATCCTGAAATGACGCAACATTTGACCAAGTTACAAAAATCAGTTGAT
AAGTATGATCTTGTAATTTAGcctgttttgattttattgtcTTTAATCTG
AAAACGTTGAACTGCTGACCTCAATGTATTTATAATGAATTTTGGCCACC
ATAACGGCTCTCCTTTGACTAGACGCAATAACCTGCAGAAAGTTGCTATC
AGAGTGAAATGGCTTAAAGAGATCTTCTAAATGAGTCTTGGATGTTCTAA
AGAATCTCACTTCTTGCTTTTCAGGACATTCAGCTTGATGGATACTGACC
ATAATGAGCGATTAAGTCTTGAAGAGTTTACTCTTTTCTTGAAGGATGTT
GACAGCAAATTAAAAGCCTACCCTGCTACAGCCCAAGTCGCTTCTCAACA
AGGCAAATATCTCGGAAAACTTCTCTCGGCACATTCTGAGATcactgaaa
atgaagatttctcGGTTTGCAAACCCTTCGAATACAGTCATTTGGGGAGT
TTTGCTTATGTTGGGGGAGAAGCAGCTGTGTTGGAGCTCCCTATCATTGG
TACTTTCACCAACTTTGCCACCATTTGGTTATGGAGAGGTGCCTACTTAA
ACCAAGCTGTTAGTTGGAGAATGCAGTGCCTTATTGGGTTTGATTGGGTT
AAAGCACACGTTTTTGGTCGAGATACTTCAGAAATTTAAATTAGACCTGA
TTTATCTTCTTCTTTatattttgtcttattttatttattctttaggGTAT
TTAGATATCTCTATATATTGGGGCTTACAATGATAAGGGTTTTTTAGGGG
TTTTCTTTTGTATTATTTGCTAATTTAAGAgaagaatttattttggtaAA
TGGAATTTTATGTGCATTGTTGTGATTATTTTATTGAAatcatttgtttt
gttttgtagaTATTTTGTATATTTATCATCTTTAACATAGCATTTATAGA
taaattatttgttttattgCTAGCACACTTTCGCTGTACCTATTCGAAAA
CATCTTACTGAAAAAATATTACTGATAGTTTGATAGCATTTCTAGTCTAG
GGAATCTTCATTCTGAACATTTTTAATCTCTAATAATATTTTGTGTGTGG
AAGATCAAAGTATGATTTATCAGAGGTGAGTATTAGACTACCCAGGTATC
CCAAGCCAATTCTTACCAAGCTCTATACTTTTCCTGTATACGTACCCATA
TCATTTTAATTGTCAGCAATACCAATTGTAGACCCTTAGTAATCCATGCA
GAAGACAAAGGGTTCGATTCTCACTCGGTTCTGTGGTGCATTTGGCAAGT
GATTGTAGCAACGCCCGGGTCAACCAATGTCATGTTAAGGGAACTGGGTA
CCAAAAGATACATCAGTGTGGGGAATAATGCCAACTGCATCTTAGGTTGT
GATGTTGCTCACTTGTTCAAGCTTATTTGAGTTGCACAACCAATAAAGCA
CGACTCTAATGGTGTCTCAaggatacaccttttcgaccgtagccgccaat
tgccgcacgggcatttctttgtccgctttatcccactaaaaccgtccagT
CCtattttcgcacctatagaccatagaaaaatgtgtcaaaaaaaggattg
aatcgagtttagggggataattaaataattaagtgacaCGCACCTGaata
cggtcgaaaaggtgtattaatgGTGGCTTTTCTTTGTTAAGAACAACGGG
GGTTTCGCCCGAAAATGCCTGCAGATAATCAGCTAACCAAAAGGAAGTGT
AATATATTATTGACATTTAATTTATTATATTAAATCACAACATATCCATA
GTATTAATGTATTATGTTAAATCATATCATATATCTTTATTATAATATTG
TATTATCTTATCACGGCATACACTATTTACACATTTGCaaacaaatgttt
tgaaaacggTTCACCTTGGTATTCCTCTAAAAACATTAACATACAAttcg
ctaccttaattcaaaaggggttAAGTTAAGACGGTTCATAACTTCATACT
GAAGCTCTGATAAAAGTgatgtttaattcaaaagaggccaaagtccatca
tctttttacaatagaagggcctaagtccatcatctCTTTACAataaaggg
cctaagtccaccaaaataagtttgttTAAGTT

Coding sequence (CDS) from alignment at sc0001666:11610..17191+

>TCONS_00037603 ID=TCONS_00037603|Name=TCONS_00037603|organism=Clytia hemisphaerica|type=CDS|length=10248bp|location=Sequence derived from alignment at sc0001666:11610..17191+ (Clytia hemisphaerica)
ATGGACGCAGCCTCACAGAACCAATCAGAAAGATTTTATCGAAGAAACAA
AAGGAGGGAAATTATGAATATTTNTAGCCTTACAGAACCAATCAGAAAGA
TTTTATCGAAGAAACAAAAGGAGGGAAATTATGAATATTTTGAAGCCCAT
TGCATTGATGTTGATACTGAGAAAAATCAAGTTATTTGTGCTGATAAATC
AGATATTCAAAGCGACAGCCCTGAGTTCAAGATTGACTATGACATTTTGG
TAGTGGCTGTTGGATCGAAAACAAACACGTACAACAATCCTGATATCAAG
AAATATTCTCATAAACTAAAAAATGTTCAACAAGCTCGAGAAGTCCGCAA
ACATATTGTTGATTCTTTGGAAACTGCCATTTTGCCAGGTCAATGtgaag
aagaaatgaaaaggatgttgagttttgttgTCGTTGGTGGTGGGCCTACA
GGAGTTGAATTTGCTGGAGAATTGCGTGATTATCTTgatgatttgaaaaa
tgtttatcCTCAACAAGTTATTGATAATATGTGCATAACTTTGGTGAATA
GCCATTACAAAGTGTTGAGTATGTATGACCAACAGATAAGCAATTTCACT
GAACAGAAATTCAAATCAGACGGTATCAACACGATTGGTAATTCTTATGT
AGTTGGAATGGATCCAAAGAATATTAAAATCCAAAACAAGAAGACTAAAG
AGATAACAGTTTTACCGTATGGTTTATGTGTTTGGGCTGCTGGTATTGCA
CCTAGAGACATAACTAAGGCGCTGATCAAAAGAATGCCTGCACAAAACAA
CAGAAATGCATTGGTCACAGATGGCTACATGAAATTGAAAGGAAGCAATA
ATATTTTTGGTATCGGAGACTGTTCTACTGTCGAGTTTACTAAGCTAATG
TATCAAGTTGAACAGTTATTCAAAGAAGCTGATCTTGATGGGACTGGTCA
GCTATCTCTCTCTGAATTCTCAGTATTTTTGGAGACAGCAAAGAAGAAAT
ATCCTGAAATGACGCAACATTTGACCAAGTTACAAAAATCAGTTGATAAG
ACATTCAGCTTGATGGATACTGACCATAATGAGCGATTAAGTCTTGAAGA
GTTTACTCTTTTCTTGAAGGATGTTGACAGCAAATTAAAAGCCTACCCTG
CTACAGCCCAAGTCGCTTCTCAACAAGGCAAATATCTCGGAAAACTTCTC
TCGGCACATTCTGAGATcactgaaaatgaagatttctcGGTTTGCAAACC
CTTCGAATACAGTCATTTGGGGAGTTTTGCTTATGTTGGGGGAGAAGCAG
CTGTGTTGGAGCTCCCTATCATTGGTACTTTCACCAACTTTGCCACCATT
TGGTTATGGAGAGGTGCCTACTTAAACCAAGCTGTTAGTTGGAGAATGCA
GTGCCTTATTGGGTTTGATTGGGTTAAAGCACACGTTTTTGGTCGAGATA
CTTCAGAAATTTAAATGGACGCAGCCTCACAGAACCAATCAGAAAGATTT
TATCGAAGAAACAAAAGGAGGGAAATTATGAATATTTNTAGCCTTACAGA
ACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGGAAATTATGAAT
ATTTTGAAGCCCATTGCATTGATGTTGATACTGAGAAAAATCAAGTTATT
TGTGCTGATAAATCAGATATTCAAAGCGACAGCCCTGAGTTCAAGATTGA
CTATGACATTTTGGTAGTGGCTGTTGGATCGAAAACAAACACGTACAACA
ATCCTGATATCAAGAAATATTCTCATAAACTAAAAAATGTTCAACAAGCT
CGAGAAGTCCGCAAACATATTGTTGATTCTTTGGAAACTGCCATTTTGCC
AGGTCAATGtgaagaagaaatgaaaaggatgttgagttttgttgTCGTTG
GTGGTGGGCCTACAGGAGTTGAATTTGCTGGAGAATTGCGTGATTATCTT
gatgatttgaaaaatgtttatcCTCAACAAGTTATTGATAATATGTGCAT
AACTTTGGTGAATAGCCATTACAAAGTGTTGAGTATGTATGACCAACAGA
TAAGCAATTTCACTGAACAGAAATTCAAATCAGACGGTATCAACACGATT
GGTAATTCTTATGTAGTTGGAATGGATCCAAAGAATATTAAAATCCAAAA
CAAGAAGACTAAAGAGATAACAGTTTTACCGTATGGTTTATGTGTTTGGG
CTGCTGGTATTGCACCTAGAGACATAACTAAGGCGCTGATCAAAAGAATG
CCTGCACAAAACAACAGAAATGCATTGGTCACAGATGGCTACATGAAATT
GAAAGGAAGCAATAATATTTTTGGTATCGGAGACTGTTCTACTGTCGAGT
TTACTAAGCTAATGTATCAAGTTGAACAGTTATTCAAAGAAGCTGATCTT
GATGGGACTGGTCAGCTATCTCTCTCTGAATTCTCAGTATTTTTGGAGAC
AGCAAAGAAGAAATATCCTGAAATGACGCAACATTTGACCAAGTTACAAA
AATCAGTTGATAAGACATTCAGCTTGATGGATACTGACCATAATGAGCGA
TTAAGTCTTGAAGAGTTTACTCTTTTCTTGAAGGATGTTGACAGCAAATT
AAAAGCCTACCCTGCTACAGCCCAAGTCGCTTCTCAACAAGGCAAATATC
TCGGAAAACTTCTCTCGGCACATTCTGAGATcactgaaaatgaagatttc
tcGGTTTGCAAACCCTTCGAATACAGTCATTTGGGGAGTTTTGCTTATGT
TGGGGGAGAAGCAGCTGTGTTGGAGCTCCCTATCATTGGTACTTTCACCA
ACTTTGCCACCATTTGGTTATGGAGAGGTGCCTACTTAAACCAAGCTGTT
AGTTGGAGAATGCAGTGCCTTATTGGGTTTGATTGGGTTAAAGCACACGT
TTTTGGTCGAGATACTTCAGAAATTTAAATGGACGCAGCCTCACAGAACC
AATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGGAAATTATGAATATT
TNTAGCCTTACAGAACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGA
GGGAAATTATGAATATTTTGAAGCCCATTGCATTGATGTTGATACTGAGA
AAAATCAAGTTATTTGTGCTGATAAATCAGATATTCAAAGCGACAGCCCT
GAGTTCAAGATTGACTATGACATTTTGGTAGTGGCTGTTGGATCGAAAAC
AAACACGTACAACAATCCTGATATCAAGAAATATTCTCATAAACTAAAAA
ATGTTCAACAAGCTCGAGAAGTCCGCAAACATATTGTTGATTCTTTGGAA
ACTGCCATTTTGCCAGGTCAATGtgaagaagaaatgaaaaggatgttgag
ttttgttgTCGTTGGTGGTGGGCCTACAGGAGTTGAATTTGCTGGAGAAT
TGCGTGATTATCTTgatgatttgaaaaatgtttatcCTCAACAAGTTATT
GATAATATGTGCATAACTTTGGTGAATAGCCATTACAAAGTGTTGAGTAT
GTATGACCAACAGATAAGCAATTTCACTGAACAGAAATTCAAATCAGACG
GTATCAACACGATTGGTAATTCTTATGTAGTTGGAATGGATCCAAAGAAT
ATTAAAATCCAAAACAAGAAGACTAAAGAGATAACAGTTTTACCGTATGG
TTTATGTGTTTGGGCTGCTGGTATTGCACCTAGAGACATAACTAAGGCGC
TGATCAAAAGAATGCCTGCACAAAACAACAGAAATGCATTGGTCACAGAT
GGCTACATGAAATTGAAAGGAAGCAATAATATTTTTGGTATCGGAGACTG
TTCTACTGTCGAGTTTACTAAGCTAATGTATCAAGTTGAACAGTTATTCA
AAGAAGCTGATCTTGATGGGACTGGTCAGCTATCTCTCTCTGAATTCTCA
GTATTTTTGGAGACAGCAAAGAAGAAATATCCTGAAATGACGCAACATTT
GACCAAGTTACAAAAATCAGTTGATAAGACATTCAGCTTGATGGATACTG
ACCATAATGAGCGATTAAGTCTTGAAGAGTTTACTCTTTTCTTGAAGGAT
GTTGACAGCAAATTAAAAGCCTACCCTGCTACAGCCCAAGTCGCTTCTCA
ACAAGGCAAATATCTCGGAAAACTTCTCTCGGCACATTCTGAGATcactg
aaaatgaagatttctcGGTTTGCAAACCCTTCGAATACAGTCATTTGGGG
AGTTTTGCTTATGTTGGGGGAGAAGCAGCTGTGTTGGAGCTCCCTATCAT
TGGTACTTTCACCAACTTTGCCACCATTTGGTTATGGAGAGGTGCCTACT
TAAACCAAGCTGTTAGTTGGAGAATGCAGTGCCTTATTGGGTTTGATTGG
GTTAAAGCACACGTTTTTGGTCGAGATACTTCAGAAATTTAAATGGACGC
AGCCTCACAGAACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGG
AAATTATGAATATTTNTAGCCTTACAGAACCAATCAGAAAGATTTTATCG
AAGAAACAAAAGGAGGGAAATTATGAATATTTTGAAGCCCATTGCATTGA
TGTTGATACTGAGAAAAATCAAGTTATTTGTGCTGATAAATCAGATATTC
AAAGCGACAGCCCTGAGTTCAAGATTGACTATGACATTTTGGTAGTGGCT
GTTGGATCGAAAACAAACACGTACAACAATCCTGATATCAAGAAATATTC
TCATAAACTAAAAAATGTTCAACAAGCTCGAGAAGTCCGCAAACATATTG
TTGATTCTTTGGAAACTGCCATTTTGCCAGGTCAATGtgaagaagaaatg
aaaaggatgttgagttttgttgTCGTTGGTGGTGGGCCTACAGGAGTTGA
ATTTGCTGGAGAATTGCGTGATTATCTTgatgatttgaaaaatgtttatc
CTCAACAAGTTATTGATAATATGTGCATAACTTTGGTGAATAGCCATTAC
AAAGTGTTGAGTATGTATGACCAACAGATAAGCAATTTCACTGAACAGAA
ATTCAAATCAGACGGTATCAACACGATTGGTAATTCTTATGTAGTTGGAA
TGGATCCAAAGAATATTAAAATCCAAAACAAGAAGACTAAAGAGATAACA
GTTTTACCGTATGGTTTATGTGTTTGGGCTGCTGGTATTGCACCTAGAGA
CATAACTAAGGCGCTGATCAAAAGAATGCCTGCACAAAACAACAGAAATG
CATTGGTCACAGATGGCTACATGAAATTGAAAGGAAGCAATAATATTTTT
GGTATCGGAGACTGTTCTACTGTCGAGTTTACTAAGCTAATGTATCAAGT
TGAACAGTTATTCAAAGAAGCTGATCTTGATGGGACTGGTCAGCTATCTC
TCTCTGAATTCTCAGTATTTTTGGAGACAGCAAAGAAGAAATATCCTGAA
ATGACGCAACATTTGACCAAGTTACAAAAATCAGTTGATAAGACATTCAG
CTTGATGGATACTGACCATAATGAGCGATTAAGTCTTGAAGAGTTTACTC
TTTTCTTGAAGGATGTTGACAGCAAATTAAAAGCCTACCCTGCTACAGCC
CAAGTCGCTTCTCAACAAGGCAAATATCTCGGAAAACTTCTCTCGGCACA
TTCTGAGATcactgaaaatgaagatttctcGGTTTGCAAACCCTTCGAAT
ACAGTCATTTGGGGAGTTTTGCTTATGTTGGGGGAGAAGCAGCTGTGTTG
GAGCTCCCTATCATTGGTACTTTCACCAACTTTGCCACCATTTGGTTATG
GAGAGGTGCCTACTTAAACCAAGCTGTTAGTTGGAGAATGCAGTGCCTTA
TTGGGTTTGATTGGGTTAAAGCACACGTTTTTGGTCGAGATACTTCAGAA
ATTTAAATGGACGCAGCCTCACAGAACCAATCAGAAAGATTTTATCGAAG
AAACAAAAGGAGGGAAATTATGAATATTTNTAGCCTTACAGAACCAATCA
GAAAGATTTTATCGAAGAAACAAAAGGAGGGAAATTATGAATATTTTGAA
GCCCATTGCATTGATGTTGATACTGAGAAAAATCAAGTTATTTGTGCTGA
TAAATCAGATATTCAAAGCGACAGCCCTGAGTTCAAGATTGACTATGACA
TTTTGGTAGTGGCTGTTGGATCGAAAACAAACACGTACAACAATCCTGAT
ATCAAGAAATATTCTCATAAACTAAAAAATGTTCAACAAGCTCGAGAAGT
CCGCAAACATATTGTTGATTCTTTGGAAACTGCCATTTTGCCAGGTCAAT
GtgaagaagaaatgaaaaggatgttgagttttgttgTCGTTGGTGGTGGG
CCTACAGGAGTTGAATTTGCTGGAGAATTGCGTGATTATCTTgatgattt
gaaaaatgtttatcCTCAACAAGTTATTGATAATATGTGCATAACTTTGG
TGAATAGCCATTACAAAGTGTTGAGTATGTATGACCAACAGATAAGCAAT
TTCACTGAACAGAAATTCAAATCAGACGGTATCAACACGATTGGTAATTC
TTATGTAGTTGGAATGGATCCAAAGAATATTAAAATCCAAAACAAGAAGA
CTAAAGAGATAACAGTTTTACCGTATGGTTTATGTGTTTGGGCTGCTGGT
ATTGCACCTAGAGACATAACTAAGGCGCTGATCAAAAGAATGCCTGCACA
AAACAACAGAAATGCATTGGTCACAGATGGCTACATGAAATTGAAAGGAA
GCAATAATATTTTTGGTATCGGAGACTGTTCTACTGTCGAGTTTACTAAG
CTAATGTATCAAGTTGAACAGTTATTCAAAGAAGCTGATCTTGATGGGAC
TGGTCAGCTATCTCTCTCTGAATTCTCAGTATTTTTGGAGACAGCAAAGA
AGAAATATCCTGAAATGACGCAACATTTGACCAAGTTACAAAAATCAGTT
GATAAGACATTCAGCTTGATGGATACTGACCATAATGAGCGATTAAGTCT
TGAAGAGTTTACTCTTTTCTTGAAGGATGTTGACAGCAAATTAAAAGCCT
ACCCTGCTACAGCCCAAGTCGCTTCTCAACAAGGCAAATATCTCGGAAAA
CTTCTCTCGGCACATTCTGAGATcactgaaaatgaagatttctcGGTTTG
CAAACCCTTCGAATACAGTCATTTGGGGAGTTTTGCTTATGTTGGGGGAG
AAGCAGCTGTGTTGGAGCTCCCTATCATTGGTACTTTCACCAACTTTGCC
ACCATTTGGTTATGGAGAGGTGCCTACTTAAACCAAGCTGTTAGTTGGAG
AATGCAGTGCCTTATTGGGTTTGATTGGGTTAAAGCACACGTTTTTGGTC
GAGATACTTCAGAAATTTAAATGGACGCAGCCTCACAGAACCAATCAGAA
AGATTTTATCGAAGAAACAAAAGGAGGGAAATTATGAATATTTNTAGCCT
TACAGAACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGGAAATT
ATGAATATTTTGAAGCCCATTGCATTGATGTTGATACTGAGAAAAATCAA
GTTATTTGTGCTGATAAATCAGATATTCAAAGCGACAGCCCTGAGTTCAA
GATTGACTATGACATTTTGGTAGTGGCTGTTGGATCGAAAACAAACACGT
ACAACAATCCTGATATCAAGAAATATTCTCATAAACTAAAAAATGTTCAA
CAAGCTCGAGAAGTCCGCAAACATATTGTTGATTCTTTGGAAACTGCCAT
TTTGCCAGGTCAATGtgaagaagaaatgaaaaggatgttgagttttgttg
TCGTTGGTGGTGGGCCTACAGGAGTTGAATTTGCTGGAGAATTGCGTGAT
TATCTTgatgatttgaaaaatgtttatcCTCAACAAGTTATTGATAATAT
GTGCATAACTTTGGTGAATAGCCATTACAAAGTGTTGAGTATGTATGACC
AACAGATAAGCAATTTCACTGAACAGAAATTCAAATCAGACGGTATCAAC
ACGATTGGTAATTCTTATGTAGTTGGAATGGATCCAAAGAATATTAAAAT
CCAAAACAAGAAGACTAAAGAGATAACAGTTTTACCGTATGGTTTATGTG
TTTGGGCTGCTGGTATTGCACCTAGAGACATAACTAAGGCGCTGATCAAA
AGAATGCCTGCACAAAACAACAGAAATGCATTGGTCACAGATGGCTACAT
GAAATTGAAAGGAAGCAATAATATTTTTGGTATCGGAGACTGTTCTACTG
TCGAGTTTACTAAGCTAATGTATCAAGTTGAACAGTTATTCAAAGAAGCT
GATCTTGATGGGACTGGTCAGCTATCTCTCTCTGAATTCTCAGTATTTTT
GGAGACAGCAAAGAAGAAATATCCTGAAATGACGCAACATTTGACCAAGT
TACAAAAATCAGTTGATAAGACATTCAGCTTGATGGATACTGACCATAAT
GAGCGATTAAGTCTTGAAGAGTTTACTCTTTTCTTGAAGGATGTTGACAG
CAAATTAAAAGCCTACCCTGCTACAGCCCAAGTCGCTTCTCAACAAGGCA
AATATCTCGGAAAACTTCTCTCGGCACATTCTGAGATcactgaaaatgaa
gatttctcGGTTTGCAAACCCTTCGAATACAGTCATTTGGGGAGTTTTGC
TTATGTTGGGGGAGAAGCAGCTGTGTTGGAGCTCCCTATCATTGGTACTT
TCACCAACTTTGCCACCATTTGGTTATGGAGAGGTGCCTACTTAAACCAA
GCTGTTAGTTGGAGAATGCAGTGCCTTATTGGGTTTGATTGGGTTAAAGC
ACACGTTTTTGGTCGAGATACTTCAGAAATTTAAATGGACGCAGCCTCAC
AGAACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGGAAATTATG
AATATTTNTAGCCTTACAGAACCAATCAGAAAGATTTTATCGAAGAAACA
AAAGGAGGGAAATTATGAATATTTTGAAGCCCATTGCATTGATGTTGATA
CTGAGAAAAATCAAGTTATTTGTGCTGATAAATCAGATATTCAAAGCGAC
AGCCCTGAGTTCAAGATTGACTATGACATTTTGGTAGTGGCTGTTGGATC
GAAAACAAACACGTACAACAATCCTGATATCAAGAAATATTCTCATAAAC
TAAAAAATGTTCAACAAGCTCGAGAAGTCCGCAAACATATTGTTGATTCT
TTGGAAACTGCCATTTTGCCAGGTCAATGtgaagaagaaatgaaaaggat
gttgagttttgttgTCGTTGGTGGTGGGCCTACAGGAGTTGAATTTGCTG
GAGAATTGCGTGATTATCTTgatgatttgaaaaatgtttatcCTCAACAA
GTTATTGATAATATGTGCATAACTTTGGTGAATAGCCATTACAAAGTGTT
GAGTATGTATGACCAACAGATAAGCAATTTCACTGAACAGAAATTCAAAT
CAGACGGTATCAACACGATTGGTAATTCTTATGTAGTTGGAATGGATCCA
AAGAATATTAAAATCCAAAACAAGAAGACTAAAGAGATAACAGTTTTACC
GTATGGTTTATGTGTTTGGGCTGCTGGTATTGCACCTAGAGACATAACTA
AGGCGCTGATCAAAAGAATGCCTGCACAAAACAACAGAAATGCATTGGTC
ACAGATGGCTACATGAAATTGAAAGGAAGCAATAATATTTTTGGTATCGG
AGACTGTTCTACTGTCGAGTTTACTAAGCTAATGTATCAAGTTGAACAGT
TATTCAAAGAAGCTGATCTTGATGGGACTGGTCAGCTATCTCTCTCTGAA
TTCTCAGTATTTTTGGAGACAGCAAAGAAGAAATATCCTGAAATGACGCA
ACATTTGACCAAGTTACAAAAATCAGTTGATAAGACATTCAGCTTGATGG
ATACTGACCATAATGAGCGATTAAGTCTTGAAGAGTTTACTCTTTTCTTG
AAGGATGTTGACAGCAAATTAAAAGCCTACCCTGCTACAGCCCAAGTCGC
TTCTCAACAAGGCAAATATCTCGGAAAACTTCTCTCGGCACATTCTGAGA
TcactgaaaatgaagatttctcGGTTTGCAAACCCTTCGAATACAGTCAT
TTGGGGAGTTTTGCTTATGTTGGGGGAGAAGCAGCTGTGTTGGAGCTCCC
TATCATTGGTACTTTCACCAACTTTGCCACCATTTGGTTATGGAGAGGTG
CCTACTTAAACCAAGCTGTTAGTTGGAGAATGCAGTGCCTTATTGGGTTT
GATTGGGTTAAAGCACACGTTTTTGGTCGAGATACTTCAGAAATTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022358XLOC_022358Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037603-proteinTCONS_00037603-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037603-exon-sc0001666-1491911889:11610..12300TCONS_00037603-exon-sc0001666-1491911889:11610..12300Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1510915933:11610..12300TCONS_00037603-exon-sc0001666-1510915933:11610..12300Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1575043694:11610..12300TCONS_00037603-exon-sc0001666-1575043694:11610..12300Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1491911889:12499..12747TCONS_00037603-exon-sc0001666-1491911889:12499..12747Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1510915933:12499..12747TCONS_00037603-exon-sc0001666-1510915933:12499..12747Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1575043694:12499..12747TCONS_00037603-exon-sc0001666-1575043694:12499..12747Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1491911889:12893..13026TCONS_00037603-exon-sc0001666-1491911889:12893..13026Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1510915933:12893..13026TCONS_00037603-exon-sc0001666-1510915933:12893..13026Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1575043694:12893..13026TCONS_00037603-exon-sc0001666-1575043694:12893..13026Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1491911889:13425..13642TCONS_00037603-exon-sc0001666-1491911889:13425..13642Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1510915933:13425..13642TCONS_00037603-exon-sc0001666-1510915933:13425..13642Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1575043694:13425..13642TCONS_00037603-exon-sc0001666-1575043694:13425..13642Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1491911889:14410..14579TCONS_00037603-exon-sc0001666-1491911889:14410..14579Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1510915933:14410..14579TCONS_00037603-exon-sc0001666-1510915933:14410..14579Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1575043694:14410..14579TCONS_00037603-exon-sc0001666-1575043694:14410..14579Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1491911889:15036..15111TCONS_00037603-exon-sc0001666-1491911889:15036..15111Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1510915933:15036..15111TCONS_00037603-exon-sc0001666-1510915933:15036..15111Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1575043694:15036..15111TCONS_00037603-exon-sc0001666-1575043694:15036..15111Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1491911889:15334..17191TCONS_00037603-exon-sc0001666-1491911889:15334..17191Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1510915933:15334..17191TCONS_00037603-exon-sc0001666-1510915933:15334..17191Clytia hemisphaericaexon
TCONS_00037603-exon-sc0001666-1575043694:15334..17191TCONS_00037603-exon-sc0001666-1575043694:15334..17191Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001666supercontigsc0001666:11610..17191 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.5273	11.1705	3.43095	1.64006	25.8598	20.383	25.5887	28.1097	26.208	25.2162	25.3389	20.8025	23.9047	21.8836	15.8469	19.3219	19.1399	25.7234	19.0248	25.722	21.6804	21.3733	16.0512	17.2599	12.5044	15.2225	11.8661	11.5347	12.5773	14.5155
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR023753FAD/NAD-binding_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0016491 oxidoreductase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037603 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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