XLOC_022358 (gene) - C. hemisphaerica

Overview
NameXLOC_022358
Unique NameXLOC_022358
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001666:11610..17191+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022358 ID=XLOC_022358|Name=XLOC_022358|organism=Clytia hemisphaerica|type=gene|length=5582bp|location=Sequence derived from alignment at sc0001666:11610..17191+ (Clytia hemisphaerica)
CAGGCATTCATTTCtgttttcctttgtttgatCTTATCcatattttttcc tctttttttcatcaattttgctgtttttctcTTTCAGAACTATgtgaaaa tacaaaaggaagtATGTGGAGCAGACAATTAACTAGGCTATGCCGTCAAC CCCCGATCAAGAAGGGAAGACAGCTAGTCCCTAGAAAAGAAGTTGTTATC AGATTTCAAAGTTACactaaacaaaatttaacataCAGCTTGAAGTATAT TTTGGGATTACTTGGAGGAACTTTGACAGGCGGTTTATctgtttatttga tttttaaccatAATGTGGACGTGGAAGCATCTCAACCAAAGAAAAAACTT GTGATACTTGGCTCTGGTTGGGGTGCAGTCAGTCTCATCAAAAGTCTAAA ACCTGATTTATATGACATCAAAGTAGTTTCGCCCACAAATTATTTTCTAT TCACACCTTTGCTACCATCTGTTACTGTTGGCACTGTGGATGGACGCAGC CTCACAGAACCAATCAGAAAGATTTTATCGAAGAAACAAAAGGAGGGAAA TTATGAATATTTNTAGCCTTACAGAACCAATCAGAAAGATTTTATCGAAG AAACAAAAGGAGGGAAATTATGAATATTTTGAAGCCCATTGCATTGATGT TGATACTGAGAAAAATCAAGTTATTTGTGCTGATAAATCAGGTTGAGTTT CATGtctttatctttttcatttgttgagTTCCCTTCACTTCGCAGACACC CTTAGATTATAAAGCCTACCCTGTTTTGGATTTTGTTGATCTAATTGATT TGACCACGTTATTGTTATTGCTGTGTAAATTGAttggctgttttttttct ctttgaaGCGTAGCATgatcaaaatttacattttgttAGATATTCAAAGC GACAGCCCTGAGTTCAAGATTGACTATGACATTTTGGTAGTGGCTGTTGG ATCGAAAACAAACACGTACAACAATCCTGATATCAAGAAATATTCTCATA AACTAAAAAATGTTCAACAAGCTCGAGAAGTCCGCAAACATATTGTTGAT TCTTTGGAAACTGCCATTTTGCCAGGTCAATGtgaagaagaaatgaaaag gatgttgagttttgttgTCGTTGGTGGTGGGCCTACAGGTTTGTTGTGGT TCTTGCCAATCAACTTTTTCCTATTAGCGCTTTTATACTTAATATTTTAG ACAGTCATCTGATTTCCTCCTAGCTTACATTGTTCTATTCTACTTAAATT CTACTATTCTATTCTACTTTTCTACTTTTTCAGGAGTTGAATTTGCTGGA GAATTGCGTGATTATCTTgatgatttgaaaaatgtttatcCTCAACAAGT TATTGATAATATGTGCATAACTTTGGTGAATAGCCATTACAAAGTGTTGA GTATGTATGACCAACAGGTTTGTAAACATACCAATTTAAAGTTCTTGTGT CCATGACTGAATATCGTCCCATTGAAGTATAGAAAGATGCTTctctgtct caaaattctgcataatttaccaaaattttataaacatgtgctaattttct ttttgaaatccaTTGTCTAAAACAAAAAACCTTGCTTTTACCACTGACAT ACATAAGTCTTTAGCTTTCCAATTACGTCATAGCCATTTGGTcccaaaat catttttcatatAATAGCCTTTGAGTGgactttttaaagaaaactgcTCA TACCTGTCATTTAATCTATCAAAAAACTATATTGTCAGAGATTActtcat tttcattcagtttAATCTAATACTGCTCAAGTTTCTTCAAAAATGTCTTA CCAACTTCTTTTCAGATAAGCAATTTCACTGAACAGAAATTCAAATCAGA CGGTATCAACACGATTGGTAATTCTTATGTAGTTGGAATGGATCCAAAGA ATATTAAAATCCAAAACAAGAAGACTAAAGAGATAACAGTTTTACCGTAT GGTTTATGTGTTTGGGCTGCTGGTATTGCACCTAGAGACATAACTAAGGC GCTGATCAAAAGAATGCCTGCACAAAACAACAGGTTAAACAATTATATTT GCTCTGTCTTTATTTAAACAGCCATCCTGTCATCAAATACCACTTATACT AGCATTGTTTTACTCaaacttttttggacctaccccggtggaggtcctat aaattaacctttgtccgttcgttcgtttgttattagctttcctcatgatt ggctcattagttttttctgattttttgcgcaaagatgcataactataaac cctcgaatgtgacggagcccgattttcaaaaaaaaaattttttgggcaaa tttgggccaaaaaacggctaaaaacgggttttttggacttcgtgaaaaat taggtcgttaattttttctgattttttgcatggaagtagggtaccatcgt aagtaaaagatggcttaagcagatttttgcaaaaaaaatttgttggctca aaaaacgcatgtttatctataagaatcactattaataagcatacatcaat gttcttagtcaaattactcaatttttttatgagatagatgtttttttttt gctcaggagggcttacttttacaaaatatgtgtgtttagacatgaaattt tggttgcttggcgtgtttttataggaaaataggccaaattcgatattctt ttataagcacattatcaattacttaggtattagctcttctcgagattggc tctttcattctttatgattttttgagcaaagatgcataactataaaccct cgaatctGACAAAAGCGACATACATCTTTAGTTATACTGTTTCTTATTAG AAATGCATTGGTCACAGATGGCTACATGAAATTGAAAGGAAGCAATAATA TTTTTGGTATCGGAGACTGTTCTACTGTCGAGTTTACTAAGCTAATGTAT CAAGTTGAACAGTTATTCAAAGAAGCTGATCTTGATGGGACTGGTCAGCT ATCTCTCTCTGAATTCTCAGGTTAGAGGGAAATATTTTGTACTGTACTAG AACACTAGAAGTACAATACAGTTTAGCCTTACCCAAACAATACCCTCATT TATCTATCTTATTTggttttgtttggttttgttgttcAATGATTTAATGC agaaccactgacctttatatatccctggaccaaaaaattggtaccctaat cgCGACACTACTCAAAAGTggtgaaaatgcatcgagagcgctggatctac tttccctcaaaTACTTTTTATGATAGCGCTGTTatgacgttaatttttaa aatttcaatggtttcttctcgggtaccaattccaaaaaaaactccaatca aagatggtggatatagcttggtccatgGATATTTAATGGTCAGTGTGCAG AACCTGTTATGACAAAGGTTTTTAAACAATTCTTTAACGTTAAGCAATGT CAAGTACTAACACCTCTTCTTTTCAGTATTTTTGGAGACAGCAAAGAAGA AATATCCTGAAATGACGCAACATTTGACCAAGTTACAAAAATCAGTTGAT AAGTATGATCTTGTAATTTAGcctgttttgattttattgtcTTTAATCTG AAAACGTTGAACTGCTGACCTCAATGTATTTATAATGAATTTTGGCCACC ATAACGGCTCTCCTTTGACTAGACGCAATAACCTGCAGAAAGTTGCTATC AGAGTGAAATGGCTTAAAGAGATCTTCTAAATGAGTCTTGGATGTTCTAA AGAATCTCACTTCTTGCTTTTCAGGACATTCAGCTTGATGGATACTGACC ATAATGAGCGATTAAGTCTTGAAGAGTTTACTCTTTTCTTGAAGGATGTT GACAGCAAATTAAAAGCCTACCCTGCTACAGCCCAAGTCGCTTCTCAACA AGGCAAATATCTCGGAAAACTTCTCTCGGCACATTCTGAGATcactgaaa atgaagatttctcGGTTTGCAAACCCTTCGAATACAGTCATTTGGGGAGT TTTGCTTATGTTGGGGGAGAAGCAGCTGTGTTGGAGCTCCCTATCATTGG TACTTTCACCAACTTTGCCACCATTTGGTTATGGAGAGGTGCCTACTTAA ACCAAGCTGTTAGTTGGAGAATGCAGTGCCTTATTGGGTTTGATTGGGTT AAAGCACACGTTTTTGGTCGAGATACTTCAGAAATTTAAATTAGACCTGA TTTATCTTCTTCTTTatattttgtcttattttatttattctttaggGTAT TTAGATATCTCTATATATTGGGGCTTACAATGATAAGGGTTTTTTAGGGG TTTTCTTTTGTATTATTTGCTAATTTAAGAgaagaatttattttggtaAA TGGAATTTTATGTGCATTGTTGTGATTATTTTATTGAAatcatttgtttt gttttgtagaTATTTTGTATATTTATCATCTTTAACATAGCATTTATAGA taaattatttgttttattgCTAGCACACTTTCGCTGTACCTATTCGAAAA CATCTTACTGAAAAAATATTACTGATAGTTTGATAGCATTTCTAGTCTAG GGAATCTTCATTCTGAACATTTTTAATCTCTAATAATATTTTGTGTGTGG AAGATCAAAGTATGATTTATCAGAGGTGAGTATTAGACTACCCAGGTATC CCAAGCCAATTCTTACCAAGCTCTATACTTTTCCTGTATACGTACCCATA TCATTTTAATTGTCAGCAATACCAATTGTAGACCCTTAGTAATCCATGCA GAAGACAAAGGGTTCGATTCTCACTCGGTTCTGTGGTGCATTTGGCAAGT GATTGTAGCAACGCCCGGGTCAACCAATGTCATGTTAAGGGAACTGGGTA CCAAAAGATACATCAGTGTGGGGAATAATGCCAACTGCATCTTAGGTTGT GATGTTGCTCACTTGTTCAAGCTTATTTGAGTTGCACAACCAATAAAGCA CGACTCTAATGGTGTCTCAaggatacaccttttcgaccgtagccgccaat tgccgcacgggcatttctttgtccgctttatcccactaaaaccgtccagT CCtattttcgcacctatagaccatagaaaaatgtgtcaaaaaaaggattg aatcgagtttagggggataattaaataattaagtgacaCGCACCTGaata cggtcgaaaaggtgtattaatgGTGGCTTTTCTTTGTTAAGAACAACGGG GGTTTCGCCCGAAAATGCCTGCAGATAATCAGCTAACCAAAAGGAAGTGT AATATATTATTGACATTTAATTTATTATATTAAATCACAACATATCCATA GTATTAATGTATTATGTTAAATCATATCATATATCTTTATTATAATATTG TATTATCTTATCACGGCATACACTATTTACACATTTGCaaacaaatgttt tgaaaacggTTCACCTTGGTATTCCTCTAAAAACATTAACATACAAttcg ctaccttaattcaaaaggggttAAGTTAAGACGGTTCATAACTTCATACT GAAGCTCTGATAAAAGTgatgtttaattcaaaagaggccaaagtccatca tctttttacaatagaagggcctaagtccatcatctCTTTACAataaaggg cctaagtccaccaaaataagtttgttTAAGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037602TCONS_00037602Clytia hemisphaericatranscript
TCONS_00037603TCONS_00037603Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037603-proteinTCONS_00037603-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001666supercontigsc0001666:11610..17191 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.09 12.59 3.43 1.64 27.61 22.86 28.21 29.81 29.14 27.04 29.79 24.11 27.47 25.72 18.75 21.46 22.63 27.4 21.83 28.55 23.53 23.42 17.36 19.47 16.22 18.35 14.31 11.54 15.01 16.29