TCONS_00034762 (transcript) - C. hemisphaerica

Overview
NameTCONS_00034762
Unique NameTCONS_00034762
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00034762 ID=TCONS_00034762|Name=TCONS_00034762|organism=Clytia hemisphaerica|type=transcript|length=3151bp
cttccacaagaaaaattattgaaaaaattgtaatactatgacaaaaaaaa
actaatgaaaaacTAGTAGCAAATAGCAATTAAAAACtcttaaaaataat
atttcaaaatcactttaaacCTCCCTCCTCACATCTCCAATTTTGCATCA
ATTGAGACAACAACCAGTTTCACTCTGTTTAAACAGTTccacagtagcgt
agacaggagtggcgcaaaatttgtgtaggagagcagatttttatgacact
gtaattatctattcataatgtaaaaagataattggagtgtcataaaaatc
tgctcacctacacaaattttgtgccCCTCCTGTCAACGCTACTGCTCCAA
CACTTCAAAAAGCAAAACCActttatttgagtaaataaaatttttcactG
ATCCTAAATAGTAGGTGCAcgacaaaagaaaagagatgaTTGATTATCTT
GGATGTAAAATTTAGCTAaatgaaaaaatggctaaatAAAATGGGTTTAA
AAAATACATGAGTAACAACAACAACGGTAAAAAGTTTCAACCTAACAGTT
TTTCCTTTTTAGTTTTTCGACTCGATAAAATCAACAAATGTCTTCCTTGA
GATAGAAGAGTTAAGGGCGGACCAGTTCGAAAGACCGGTGCCGTCAGCCC
AAAGCCATTGAACTCGTGATTCTGCGCAATACTTAGCGTCAGCGATTGAA
CTTTTGGCCGGTTCAAAAACTGACTCGTTAGTTTTTCTGTTGTAAAAGTA
ATAACGTTTTGAAGATTTGCTGTACTGTAAATGCCATGGATCTTTCACTC
GACGGATCATGTAAACACCATTTGGAACGAAATATTTCTGATCGTTGAAA
ATACAAGCCAGCCTTCGCTCCATGCGTGGTTTCATCGTTTTCTCCTCCAG
GCTTTCTAGACAGTCATTGAGCTCAGTGAGCGGATGATAATCTTTGACAC
GCAGTTTAATGATATCTGAACGGCATGGTTTAGATAGAGCCTTAATGAAA
TTGCGAATGATTTTCAATCGATCGCTCATCGGCTTATCGCCAATGTAGTC
GTCTCCCAGCTGTAGGGCGTCGATGATGTGAACGCCCATCACTTTACGTT
GACCACGCCCGTCGCCCTTCAATTCGTAAACAAACTCGACATCCAAAATA
GTGTGGCGGGGTAACTCAAAATTCATATTGTCGACTCTTTTGAAAGTGGG
AGCAGAATTTTTTGCGGGATTCCATTGATAAATTGAATAACGCCCCAAAC
TAAACAAATAGAAGCGCTCCCCACCAGAAAAGGTCCATTTATAATCATGT
ATACTCTTCATGGCGGATAGGATATCTTGAGAAAGCGGTTTCGGCCGAGT
GCTCAACATCTTAGCGGATGAATAATTAATGATTTTCTCAAACTGGTTAT
CTAGGTCACGGTTTGATGGATTGGATCTAGCGGCGGTTGGGACTTTCCAG
GCTTCTAAGCACTGTTTACGTACTTCAGCTTGATTTGCACCAACCAGATT
TGTATTTTGGACGTAAGTTGCAAGCTTTTTCAATCCAAGGATTTGCCGTG
CGCCGATTTCGTTGTTGGAATTGTAGATGTattggaaaaacggctcgtcg
tCTTTTATAATATCGACAGGGACGACCTCTCCTATGTCGATATTACTACC
TTTCAAGCGGTTAATCTTGCAATTCAGCTCAAACATATAATCATGAATGG
ATGAGACATCTTTTCGATATTTCTGACAAACAATGTACCGCTCACTATTT
GCAGGTCGGCTGGTGACGGGTTTGAAAATACACACTTTCTCGAACGCACG
GTACATGAGATAAACGAGACCAATGCTAAACGGGGTAAACAAGTCAAAGA
GTTTACAAACAAAATGTCCACCTTCTCTCAAGATGGAAAGAGCACAAATA
AACTGACACAAGTATAATTGTTTGGATAAGATCTCTTGTATGTTTTCGTT
CCCTTCGACGGAAAACCCTCCATCGGCCATTACGAAATGTACCCCTTTAT
TATCGGTATTCTGCATAACGTAAGAACGGAACTCGCGTAAATTATCTTCG
CGAAAAATATCACCATCCCCGTCATATCCCTTCACGCCGTAATGACAATC
GAAAGATTCAGGCGTTCCTGCTTTGAAATCGTCAAGTTTAAAATCGTTCG
CCCCTTCCGCCTTTAACGTGAAACCGAATCCTTTAGAACGCCATTTACGG
CGCCAAAGTACGTACTCCGAGAAGCCTCCAGGGCCGGCGCATATGTCAGC
GAAATATAACAAAGAGGAGGGattcttttcatcaaaatcatggTGTGATG
TGAACATATCATCAAACGAGGCGTCCATTTCCGCCATTTTCATTGCCGCC
CGATTCTGAAATATTGCACCACGAATAGTTTCATAAGGGTTAGCTCTTGT
ACGGGCTCTCAAGAACTCAGAATGACCCAAATGATCAAAAACACTTTTAC
TGGCAAGTACACCTTTTAAAATTTCTGCTTCACAGAATTGAAACTCATCG
TCTATAGTTTCTTTGCGAGCAGACATGTTAGTCCATTGATACATATCGTC
CAAAGCAGGCGCAGGGCTGGTATTGGTAGGTATCCATTGAGGGTCTTGTT
TGATCATGACTTCCTCATCTTCTTCCCAAGTAGAATTAGTCTTCCCATCC
AAACCTTGTAATCTTAGACCCAACCCACGTCGTCCACGTTGGTTCGATGC
TTCAATAATCTCGGTTCGACCGGTCTCATTTTTACCAAGACCACGCCCTT
TTTTGTATCCCATCTTAGACATCATTCGTAGAGCAATGTCACTGTATTTC
GACAGTGTTTCGTCAGGTGTTGGATTCTCACCTGCGCTGGTCGCATCATC
GGTAGTGCTATATGTTGCTTTCTTACTTTTGACGGTGGATTGACTGGTGG
AAGattcactttcgctttcactTGATGAACCTGATGATGAGTCAGCATTA
TCTCCACTCGTTGCGCTGGTAGTGGAGGATAACCGCCTCTTGCGTTGCTG
TTGGTTACTGCCACCGCCTCCACCACTGGTGCGCCCTCCACTGGTGAAGT
TGGAATACATCTTGTGTTCGTAGTTctatttgttttatattttttcttta
ttgctgAAAAATATGATCAATATGTTAGCACGATGTCAAGGAGGAAACAG
G
Run BLAST on NCBI

protein sequence of TCONS_00034762-protein

>TCONS_00034762-protein ID=TCONS_00034762-protein|Name=TCONS_00034762-protein|organism=Clytia hemisphaerica|type=polypeptide|length=833bp
MYSNFTSGGRTSGGGGGSNQQQRKRRLSSTTSATSGDNADSSSGSSSESE
SESSTSQSTVKSKKATYSTTDDATSAGENPTPDETLSKYSDIALRMMSKM
GYKKGRGLGKNETGRTEIIEASNQRGRRGLGLRLQGLDGKTNSTWEEDEE
VMIKQDPQWIPTNTSPAPALDDMYQWTNMSARKETIDDEFQFCEAEILKG
VLASKSVFDHLGHSEFLRARTRANPYETIRGAIFQNRAAMKMAEMDASFD
DMFTSHHDFDEKNPSSLLYFADICAGPGGFSEYVLWRRKWRSKGFGFTLK
AEGANDFKLDDFKAGTPESFDCHYGVKGYDGDGDIFREDNLREFRSYVMQ
NTDNKGVHFVMADGGFSVEGNENIQEILSKQLYLCQFICALSILREGGHF
VCKLFDLFTPFSIGLVYLMYRAFEKVCIFKPVTSRPANSERYIVCQKYRK
DVSSIHDYMFELNCKINRLKGSNIDIGEVVPVDIIKDDEPFFQYIYNSNN
EIGARQILGLKKLATYVQNTNLVGANQAEVRKQCLEAWKVPTAARSNPSN
RDLDNQFEKIINYSSAKMLSTRPKPLSQDILSAMKSIHDYKWTFSGGERF
YLFSLGRYSIYQWNPAKNSAPTFKRVDNMNFELPRHTILDVEFVYELKGD
GRGQRKVMGVHIIDALQLGDDYIGDKPMSDRLKIIRNFIKALSKPCRSDI
IKLRVKDYHPLTELNDCLESLEEKTMKPRMERRLACIFNDQKYFVPNGVY
MIRRVKDPWHLQYSKSSKRYYFYNRKTNESVFEPAKSSIADAKYCAESRV
QWLWADGTGLSNWSALNSSISRKTFVDFIESKN
Run BLAST on NCBI

transcript from alignment at sc0001215:39797..42947

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00034762 ID=TCONS_00034762|Name=TCONS_00034762|organism=Clytia hemisphaerica|type=transcript|length=3151bp|location=Sequence derived from alignment at sc0001215:39797..42947 (Clytia hemisphaerica)
CCTGTTTCCTCCTTGACATCGTGCTAACATATTGATCATATTTTTcagca ataaagaaaaaatataaaacaaatagAACTACGAACACAAGATGTATTCC AACTTCACCAGTGGAGGGCGCACCAGTGGTGGAGGCGGTGGCAGTAACCA ACAGCAACGCAAGAGGCGGTTATCCTCCACTACCAGCGCAACGAGTGGAG ATAATGCTGACTCATCATCAGGTTCATCAagtgaaagcgaaagtgaatCT TCCACCAGTCAATCCACCGTCAAAAGTAAGAAAGCAACATATAGCACTAC CGATGATGCGACCAGCGCAGGTGAGAATCCAACACCTGACGAAACACTGT CGAAATACAGTGACATTGCTCTACGAATGATGTCTAAGATGGGATACAAA AAAGGGCGTGGTCTTGGTAAAAATGAGACCGGTCGAACCGAGATTATTGA AGCATCGAACCAACGTGGACGACGTGGGTTGGGTCTAAGATTACAAGGTT TGGATGGGAAGACTAATTCTACTTGGGAAGAAGATGAGGAAGTCATGATC AAACAAGACCCTCAATGGATACCTACCAATACCAGCCCTGCGCCTGCTTT GGACGATATGTATCAATGGACTAACATGTCTGCTCGCAAAGAAACTATAG ACGATGAGTTTCAATTCTGTGAAGCAGAAATTTTAAAAGGTGTACTTGCC AGTAAAAGTGTTTTTGATCATTTGGGTCATTCTGAGTTCTTGAGAGCCCG TACAAGAGCTAACCCTTATGAAACTATTCGTGGTGCAATATTTCAGAATC GGGCGGCAATGAAAATGGCGGAAATGGACGCCTCGTTTGATGATATGTTC ACATCACAccatgattttgatgaaaagaatCCCTCCTCTTTGTTATATTT CGCTGACATATGCGCCGGCCCTGGAGGCTTCTCGGAGTACGTACTTTGGC GCCGTAAATGGCGTTCTAAAGGATTCGGTTTCACGTTAAAGGCGGAAGGG GCGAACGATTTTAAACTTGACGATTTCAAAGCAGGAACGCCTGAATCTTT CGATTGTCATTACGGCGTGAAGGGATATGACGGGGATGGTGATATTTTTC GCGAAGATAATTTACGCGAGTTCCGTTCTTACGTTATGCAGAATACCGAT AATAAAGGGGTACATTTCGTAATGGCCGATGGAGGGTTTTCCGTCGAAGG GAACGAAAACATACAAGAGATCTTATCCAAACAATTATACTTGTGTCAGT TTATTTGTGCTCTTTCCATCTTGAGAGAAGGTGGACATTTTGTTTGTAAA CTCTTTGACTTGTTTACCCCGTTTAGCATTGGTCTCGTTTATCTCATGTA CCGTGCGTTCGAGAAAGTGTGTATTTTCAAACCCGTCACCAGCCGACCTG CAAATAGTGAGCGGTACATTGTTTGTCAGAAATATCGAAAAGATGTCTCA TCCATTCATGATTATATGTTTGAGCTGAATTGCAAGATTAACCGCTTGAA AGGTAGTAATATCGACATAGGAGAGGTCGTCCCTGTCGATATTATAAAAG acgacgagccgtttttccaatACATCTACAATTCCAACAACGAAATCGGC GCACGGCAAATCCTTGGATTGAAAAAGCTTGCAACTTACGTCCAAAATAC AAATCTGGTTGGTGCAAATCAAGCTGAAGTACGTAAACAGTGCTTAGAAG CCTGGAAAGTCCCAACCGCCGCTAGATCCAATCCATCAAACCGTGACCTA GATAACCAGTTTGAGAAAATCATTAATTATTCATCCGCTAAGATGTTGAG CACTCGGCCGAAACCGCTTTCTCAAGATATCCTATCCGCCATGAAGAGTA TACATGATTATAAATGGACCTTTTCTGGTGGGGAGCGCTTCTATTTGTTT AGTTTGGGGCGTTATTCAATTTATCAATGGAATCCCGCAAAAAATTCTGC TCCCACTTTCAAAAGAGTCGACAATATGAATTTTGAGTTACCCCGCCACA CTATTTTGGATGTCGAGTTTGTTTACGAATTGAAGGGCGACGGGCGTGGT CAACGTAAAGTGATGGGCGTTCACATCATCGACGCCCTACAGCTGGGAGA CGACTACATTGGCGATAAGCCGATGAGCGATCGATTGAAAATCATTCGCA ATTTCATTAAGGCTCTATCTAAACCATGCCGTTCAGATATCATTAAACTG CGTGTCAAAGATTATCATCCGCTCACTGAGCTCAATGACTGTCTAGAAAG CCTGGAGGAGAAAACGATGAAACCACGCATGGAGCGAAGGCTGGCTTGTA TTTTCAACGATCAGAAATATTTCGTTCCAAATGGTGTTTACATGATCCGT CGAGTGAAAGATCCATGGCATTTACAGTACAGCAAATCTTCAAAACGTTA TTACTTTTACAACAGAAAAACTAACGAGTCAGTTTTTGAACCGGCCAAAA GTTCAATCGCTGACGCTAAGTATTGCGCAGAATCACGAGTTCAATGGCTT TGGGCTGACGGCACCGGTCTTTCGAACTGGTCCGCCCTTAACTCTTCTAT CTCAAGGAAGACATTTGTTGATTTTATCGAGTCGAAAAACTAAAAAGGAA AAACTGTTAGGTTGAAACTTTTTACCGTTGTTGTTGTTACTCATGTATTT TTTAAACCCATTTTatttagccattttttcattTAGCTAAATTTTACATC CAAGATAATCAAtcatctcttttcttttgtcgTGCACCTACTATTTAGGA TCagtgaaaaattttatttactcaaataaagTGGTTTTGCTTTTTGAAGT GTTGGAGCAGTAGCGTTGACAGGAGGggcacaaaatttgtgtaggtgagc agatttttatgacactccaattatctttttacattatgaatagataatta cagtgtcataaaaatctgctctcctacacaaattttgcgccactcctgtc tacgctactgtggAACTGTTTAAACAGAGTGAAACTGGTTGTTGTCTCAA TTGATGCAAAATTGGAGATGTGAGGAGGGAGgtttaaagtgattttgaaa tattatttttaagaGTTTTTAATTGCTATTTGCTACTAgtttttcattag tttttttttgtcatagtattacaattttttcaataatttttcttgtggaa g

Coding sequence (CDS) from alignment at sc0001215:39797..42947

>TCONS_00034762 ID=TCONS_00034762|Name=TCONS_00034762|organism=Clytia hemisphaerica|type=CDS|length=2502bp|location=Sequence derived from alignment at sc0001215:39797..42947 (Clytia hemisphaerica)
ATGTATTCCAACTTCACCAGTGGAGGGCGCACCAGTGGTGGAGGCGGTGG
CAGTAACCAACAGCAACGCAAGAGGCGGTTATCCTCCACTACCAGCGCAA
CGAGTGGAGATAATGCTGACTCATCATCAGGTTCATCAagtgaaagcgaa
agtgaatCTTCCACCAGTCAATCCACCGTCAAAAGTAAGAAAGCAACATA
TAGCACTACCGATGATGCGACCAGCGCAGGTGAGAATCCAACACCTGACG
AAACACTGTCGAAATACAGTGACATTGCTCTACGAATGATGTCTAAGATG
GGATACAAAAAAGGGCGTGGTCTTGGTAAAAATGAGACCGGTCGAACCGA
GATTATTGAAGCATCGAACCAACGTGGACGACGTGGGTTGGGTCTAAGAT
TACAAGGTTTGGATGGGAAGACTAATTCTACTTGGGAAGAAGATGAGGAA
GTCATGATCAAACAAGACCCTCAATGGATACCTACCAATACCAGCCCTGC
GCCTGCTTTGGACGATATGTATCAATGGACTAACATGTCTGCTCGCAAAG
AAACTATAGACGATGAGTTTCAATTCTGTGAAGCAGAAATTTTAAAAGGT
GTACTTGCCAGTAAAAGTGTTTTTGATCATTTGGGTCATTCTGAGTTCTT
GAGAGCCCGTACAAGAGCTAACCCTTATGAAACTATTCGTGGTGCAATAT
TTCAGAATCGGGCGGCAATGAAAATGGCGGAAATGGACGCCTCGTTTGAT
GATATGTTCACATCACAccatgattttgatgaaaagaatCCCTCCTCTTT
GTTATATTTCGCTGACATATGCGCCGGCCCTGGAGGCTTCTCGGAGTACG
TACTTTGGCGCCGTAAATGGCGTTCTAAAGGATTCGGTTTCACGTTAAAG
GCGGAAGGGGCGAACGATTTTAAACTTGACGATTTCAAAGCAGGAACGCC
TGAATCTTTCGATTGTCATTACGGCGTGAAGGGATATGACGGGGATGGTG
ATATTTTTCGCGAAGATAATTTACGCGAGTTCCGTTCTTACGTTATGCAG
AATACCGATAATAAAGGGGTACATTTCGTAATGGCCGATGGAGGGTTTTC
CGTCGAAGGGAACGAAAACATACAAGAGATCTTATCCAAACAATTATACT
TGTGTCAGTTTATTTGTGCTCTTTCCATCTTGAGAGAAGGTGGACATTTT
GTTTGTAAACTCTTTGACTTGTTTACCCCGTTTAGCATTGGTCTCGTTTA
TCTCATGTACCGTGCGTTCGAGAAAGTGTGTATTTTCAAACCCGTCACCA
GCCGACCTGCAAATAGTGAGCGGTACATTGTTTGTCAGAAATATCGAAAA
GATGTCTCATCCATTCATGATTATATGTTTGAGCTGAATTGCAAGATTAA
CCGCTTGAAAGGTAGTAATATCGACATAGGAGAGGTCGTCCCTGTCGATA
TTATAAAAGacgacgagccgtttttccaatACATCTACAATTCCAACAAC
GAAATCGGCGCACGGCAAATCCTTGGATTGAAAAAGCTTGCAACTTACGT
CCAAAATACAAATCTGGTTGGTGCAAATCAAGCTGAAGTACGTAAACAGT
GCTTAGAAGCCTGGAAAGTCCCAACCGCCGCTAGATCCAATCCATCAAAC
CGTGACCTAGATAACCAGTTTGAGAAAATCATTAATTATTCATCCGCTAA
GATGTTGAGCACTCGGCCGAAACCGCTTTCTCAAGATATCCTATCCGCCA
TGAAGAGTATACATGATTATAAATGGACCTTTTCTGGTGGGGAGCGCTTC
TATTTGTTTAGTTTGGGGCGTTATTCAATTTATCAATGGAATCCCGCAAA
AAATTCTGCTCCCACTTTCAAAAGAGTCGACAATATGAATTTTGAGTTAC
CCCGCCACACTATTTTGGATGTCGAGTTTGTTTACGAATTGAAGGGCGAC
GGGCGTGGTCAACGTAAAGTGATGGGCGTTCACATCATCGACGCCCTACA
GCTGGGAGACGACTACATTGGCGATAAGCCGATGAGCGATCGATTGAAAA
TCATTCGCAATTTCATTAAGGCTCTATCTAAACCATGCCGTTCAGATATC
ATTAAACTGCGTGTCAAAGATTATCATCCGCTCACTGAGCTCAATGACTG
TCTAGAAAGCCTGGAGGAGAAAACGATGAAACCACGCATGGAGCGAAGGC
TGGCTTGTATTTTCAACGATCAGAAATATTTCGTTCCAAATGGTGTTTAC
ATGATCCGTCGAGTGAAAGATCCATGGCATTTACAGTACAGCAAATCTTC
AAAACGTTATTACTTTTACAACAGAAAAACTAACGAGTCAGTTTTTGAAC
CGGCCAAAAGTTCAATCGCTGACGCTAAGTATTGCGCAGAATCACGAGTT
CAATGGCTTTGGGCTGACGGCACCGGTCTTTCGAACTGGTCCGCCCTTAA
CTCTTCTATCTCAAGGAAGACATTTGTTGATTTTATCGAGTCGAAAAACT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020207XLOC_020207Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034762-proteinTCONS_00034762-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034762-exon-sc0001215-1491911889:39797..42947TCONS_00034762-exon-sc0001215-1491911889:39797..42947Clytia hemisphaericaexon
TCONS_00034762-exon-sc0001215-1510915933:39797..42947TCONS_00034762-exon-sc0001215-1510915933:39797..42947Clytia hemisphaericaexon
TCONS_00034762-exon-sc0001215-1575043694:39797..42947TCONS_00034762-exon-sc0001215-1575043694:39797..42947Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001215supercontigsc0001215:39797..42947 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.0766 6.34942 3.40226 3.01145 9.81248 7.70493 13.5759 15.2685 8.6831 11.5592 9.68932 5.82922 7.67681 6.87499 8.80356 9.61201 14.1809 10.9216 5.40469 5.3187 6.936 7.25294 16.798 15.34 11.1158 12.1333 5.28225 4.03786 14.4419 15.1344
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR002877rRNA_MeTrfase_FtsJ_dom
IPR001202WW_dom
IPR025816RrmJ-type_MeTrfase
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008168methyltransferase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
Blast
BLAST of TCONS_00034762 vs. Swiss-Prot (Human)
Match: CMTR1 (Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Homo sapiens GN=CMTR1 PE=1 SV=1)

HSP 1 Score: 629.787 bits (1623), Expect = 0.000e+0
Identity = 344/727 (47.32%), Postives = 476/727 (65.47%), Query Frame = -2
Query:  640 SKYSDIALRMMSKMGYKKGRGLGKNETGRTEIIEASNXXXXXXXXXXXXXLDGKTNSTWEEDEEVMIKQDPQWIPTNTSPAPALDDMYQWTNMSARKETIDDEFQFCEAEILKGVLASKSVFDHLGHSEFLRARTRANPYETIRGAIFQNRAAMKMAEMDASFDDMFTSHHD-----FDEKNPSSLLYFADICAGPGGFSEYVLWRRKWRSKGFGFTLKAEGANDFKLDDFKAGTPESFDCHYGVKGYDGDGDIFREDNLREFRSYVMQNTDNKGVHFVMADGGFSVEGNENIQEILSKQLYLCQFICALSILREGGHFVCKLFDLFTPFSIGLVYLMYRAFEKVCIFKPVTSRPANSERYIVCQKYRKDVSSIHDYMFELNCKINRLKGSNIDIGEVVPVDIIKDDEPFFQYIYNSNNEIGARQILGLKKLATYVQNTNLVGANQAEVRKQCLEAWKVPTAARSNPSNRDLDNQFEKIINYSSAKMLSTRPKPLSQDILSAMKSIHDYKWTFSGGERFYLFSLGRYSIYQWNPAKNSAPTFKRVDNMNFELPRHTILDVEFVYELKGDGRGQRKVMGVHIIDALQLGDDYIGDKPMSDRLKIIRNFIKALSKPCRSDIIKLRVKDYHPLTELNDCLESLEEKTMK-PRMERRLACIFNDQKYFVPNGVYMIRRVKDPWHLQYSKSSKRYYFYNRKTNESVFEPAKSSIADAKYCAESRVQWLWADG 2802
            S Y+ ++ ++M+KMG+++G GLGK   GR +I+EAS+Q+GRRGLGL L+G D + N  W ++ E    +   W P  T+  P   +M  W  +  RK  I+DE +FC  E+L  VL  KSVFD L   E  RARTRANPYE IRG  F NRAAMKMA MD  FD MFT+  D       +   + LLYFAD+CAGPGGFSEYVLWR+KW +KGFG TLK  G NDFKL+DF + + E F+ +YG  G DGDGDI R +N+  FR++V+ NTD KGVHF+MADGGFSVEG EN+QEILSKQL LCQF+ ALSI+R GGHF+CK FDLFTPFS+GLVYL+Y  FE+VC+FKP+TSRPANSERY+VC+  +  +  + DY+F +N K+N+L+ ++ D+  VVP+++IK D  F  Y+  SN    + QI  L K+  +VQ+T L    QAE+RK+CL  W +P  AR  PS+ D  ++F ++I  +   + S +P  L+   L  ++ + DY+   SG E+ +L  LG+  IY W+  + S    K   ++  ELPR T+L VE V+ELKG+G+ QRK+  +HI+D L L    + ++  + R+++   F+KA+SKP R D+  +RVK+ + L E+      LE K +K      +L+    D ++FVP G+Y++R V +PW + +SKS K+ +FYN+KT +S F+    SIA    C   R+ W W DG
Sbjct:   85 SMYNSVSQKLMAKMGFREGEGLGKYSQGRKDIVEASSQKGRRGLGLTLRGFDQELNVDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVKDREAELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLK--GPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYMIRSNESHCSLQIKALAKIHAFVQDTTLSEPRQAEIRKECLRLWGIPDQARVAPSSSDPKSKFFELIQGTEIDIFSYKPTLLTSKTLEKIRPVFDYRCMVSGSEQKFLIGLGKSQIYTWD-GRQSDRWIKL--DLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHILDVLVLNGTDVREQHFNQRIQLAEKFVKAVSKPSRPDMNPIRVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDDRHFVPMGLYIVRTVNEPWTMGFSKSFKKKFFYNKKTKDSTFDLPADSIAPFHICYYGRLFWEWGDG 806          
The following BLAST results are available for this feature:
BLAST of TCONS_00034762 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTR10.000e+047.32Cap-specific mRNA (nucleoside-2'-O-)-methyltransfe... [more]
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