TCONS_00034762-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00034762-protein
Unique Name	TCONS_00034762-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	833

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00034762-protein ID=TCONS_00034762-protein|Name=TCONS_00034762-protein|organism=Clytia hemisphaerica|type=polypeptide|length=833bp
MYSNFTSGGRTSGGGGGSNQQQRKRRLSSTTSATSGDNADSSSGSSSESE
SESSTSQSTVKSKKATYSTTDDATSAGENPTPDETLSKYSDIALRMMSKM
GYKKGRGLGKNETGRTEIIEASNQRGRRGLGLRLQGLDGKTNSTWEEDEE
VMIKQDPQWIPTNTSPAPALDDMYQWTNMSARKETIDDEFQFCEAEILKG
VLASKSVFDHLGHSEFLRARTRANPYETIRGAIFQNRAAMKMAEMDASFD
DMFTSHHDFDEKNPSSLLYFADICAGPGGFSEYVLWRRKWRSKGFGFTLK
AEGANDFKLDDFKAGTPESFDCHYGVKGYDGDGDIFREDNLREFRSYVMQ
NTDNKGVHFVMADGGFSVEGNENIQEILSKQLYLCQFICALSILREGGHF
VCKLFDLFTPFSIGLVYLMYRAFEKVCIFKPVTSRPANSERYIVCQKYRK
DVSSIHDYMFELNCKINRLKGSNIDIGEVVPVDIIKDDEPFFQYIYNSNN
EIGARQILGLKKLATYVQNTNLVGANQAEVRKQCLEAWKVPTAARSNPSN
RDLDNQFEKIINYSSAKMLSTRPKPLSQDILSAMKSIHDYKWTFSGGERF
YLFSLGRYSIYQWNPAKNSAPTFKRVDNMNFELPRHTILDVEFVYELKGD
GRGQRKVMGVHIIDALQLGDDYIGDKPMSDRLKIIRNFIKALSKPCRSDI
IKLRVKDYHPLTELNDCLESLEEKTMKPRMERRLACIFNDQKYFVPNGVY
MIRRVKDPWHLQYSKSSKRYYFYNRKTNESVFEPAKSSIADAKYCAESRV
QWLWADGTGLSNWSALNSSISRKTFVDFIESKN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_020207	XLOC_020207	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00034762	TCONS_00034762	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000467	G_patch_dom
IPR002877	rRNA_MeTrfase_FtsJ_dom
IPR001202	WW_dom
IPR025816	RrmJ-type_MeTrfase
IPR029063	SAM-dependent_MTases

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008168	methyltransferase activity
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0032259	methylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 87..133 e-value: 5.7E-13 score: 59.1
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 90..132 e-value: 1.0E-14 score: 54.0
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 89..135 score: 14.015
None	No IPR available	GENE3D	3.40.50.150		coord: 178..467 e-value: 1.2E-40 score: 138.8
None	No IPR available	GENE3D	2.20.70.10		coord: 627..784 e-value: 9.7E-5 score: 21.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..87
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 234..448 e-value: 1.0E-37 score: 129.9
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 753..787 score: 8.552
IPR025816	RrmJ-type ribose 2-O-methyltransferase domain	PROSITE	PS51613	SAM_MT_RRMJ	coord: 233..449 score: 58.79
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 269..449

Blast

[Close]

BLAST of TCONS_00034762-protein vs. Swiss-Prot (Human)
Match: CMTR1 (Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Homo sapiens GN=CMTR1 PE=1 SV=1)

HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 364/798 (45.61%), Postives = 511/798 (64.04%), Query Frame = 0

Query:   20 QQQRKRRLSSTTSATSGDNADSSSGSSSESESES-STSQSTVKSKKATYSTTDDATSAGENPTPDETLSKYS---DIALRMMSKMGYKKGRGLGKNETGRTEIIEASNQRGRRGLGLRLQGLDGKTNSTWEEDEEVMIKQDPQWIPTNTSPAPALDDMYQWTNMSARKETIDDEFQFCEAEILKGVLASKSVFDHLGHSEFLRARTRANPYETIRGAIFQNRAAMKMAEMDASFDDMFTSHHD-----FDEKNPSSLLYFADICAGPGGFSEYVLWRRKWRSKGFGFTLKAEGANDFKLDDFKAGTPESFDCHYGVKGYDGDGDIFREDNLREFRSYVMQNTDNKGVHFVMADGGFSVEGNENIQEILSKQLYLCQFICALSILREGGHFVCKLFDLFTPFSIGLVYLMYRAFEKVCIFKPVTSRPANSERYIVCQKYRKDVSSIHDYMFELNCKINRLKGSNIDIGEVVPVDIIKDDEPFFQYIYNSNNEIGARQILGLKKLATYVQNTNLVGANQAEVRKQCLEAWKVPTAARSNPSNRDLDNQFEKIINYSSAKMLSTRPKPLSQDILSAMKSIHDYKWTFSGGERFYLFSLGRYSIYQWNPAKNSAPTFKRVDNMNFELPRHTILDVEFVYELKGDGRGQRKVMGVHIIDALQLGDDYIGDKPMSDRLKIIRNFIKALSKPCRSDIIKLRVKDYHPLTELNDCLESLEEKTMK-PRMERRLACIFNDQKYFVPNGVYMIRRVKDPWHLQYSKSSKRYYFYNRKTNESVFEPAKSSIADAKYCAESRVQWLWADG 807
            Q++R   L+ + S+TS D   SS    +++ + S S S S  + K+ +  + DDA  A  +   + T S+YS    ++ ++M+KMG+++G GLGK   GR +I+EAS+Q+GRRGLGL L+G D + N  W ++ E    +   W P  T+  P   +M  W  +  RK  I+DE +FC  E+L  VL  KSVFD L   E  RARTRANPYE IRG  F NRAAMKMA MD  FD MFT+  D       +   + LLYFAD+CAGPGGFSEYVLWR+KW +KGFG TLK  G NDFKL+DF + + E F+ +YG  G DGDGDI R +N+  FR++V+ NTD KGVHF+MADGGFSVEG EN+QEILSKQL LCQF+ ALSI+R GGHF+CK FDLFTPFS+GLVYL+Y  FE+VC+FKP+TSRPANSERY+VC+  +  +  + DY+F +N K+N+L+ ++ D+  VVP+++IK D  F  Y+  SN    + QI  L K+  +VQ+T L    QAE+RK+CL  W +P  AR  PS+ D  ++F ++I  +   + S +P  L+   L  ++ + DY+   SG E+ +L  LG+  IY W+  + S    K   ++  ELPR T+L VE V+ELKG+G+ QRK+  +HI+D L L    + ++  + R+++   F+KA+SKP R D+  +RVK+ + L E+      LE K +K      +L+    D ++FVP G+Y++R V +PW + +SKS K+ +FYN+KT +S F+    SIA    C   R+ W W DG
Sbjct:   16 QKKRVAELALSLSSTSDDEPPSSVSHGAKASTTSLSGSDSETEGKQHSSDSFDDAFKA--DSLVEGTSSRYSMYNSVSQKLMAKMGFREGEGLGKYSQGRKDIVEASSQKGRRGLGLTLRGFDQELNVDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKSVFDVLDGEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVKDREAELLYFADVCAGPGGFSEYVLWRKKWHAKGFGMTLK--GPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYMIRSNESHCSLQIKALAKIHAFVQDTTLSEPRQAEIRKECLRLWGIPDQARVAPSSSDPKSKFFELIQGTEIDIFSYKPTLLTSKTLEKIRPVFDYRCMVSGSEQKFLIGLGKSQIYTWD-GRQSDRWIKL--DLKTELPRDTLLSVEIVHELKGEGKAQRKISAIHILDVLVLNGTDVREQHFNQRIQLAEKFVKAVSKPSRPDMNPIRVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDDRHFVPMGLYIVRTVNEPWTMGFSKSFKKKFFYNKKTKDSTFDLPADSIAPFHICYYGRLFWEWGDG 806

The following BLAST results are available for this feature:

BLAST of TCONS_00034762-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00034762-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CMTR1	0.000e+0	45.61	Cap-specific mRNA (nucleoside-2'-O-)-methyltransfe...	[more]

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TCONS_00034762-protein (polypeptide) - C. hemisphaerica