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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022816 ID=TCONS_00022816|Name=TCONS_00022816|organism=Clytia hemisphaerica|type=transcript|length=274bp
GCTGGTCTTGTTTCTCCTACACATACTAAACGTTCAAGTACAAACATTAT
TTTCTCGTCTTTGGAAGAGCTAGATGTTATTGTACCACTTGATCAAACCT
GCGATCAAAATGTTGAAAGACAAGTTCTTCAAGTCATTGAGGATAGCTCA
TTATTCAATCACTCCCACATCGACGCAGCAGTAGGgaaTCTACAACAATT
CAGGACTAGACACTTCGGATACGAACTTCGAGACACAGCACGTCAGGAGA
GAGTGACAATCGATGGAACAGAAT Run BLAST on NCBI transcript from alignment at sc0000434:205459..206708+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022816 ID=TCONS_00022816|Name=TCONS_00022816|organism=Clytia hemisphaerica|type=transcript|length=1250bp|location=Sequence derived from alignment at sc0000434:205459..206708+ (Clytia hemisphaerica)
GCTGGTCTTGTTTCTCCTACACATACTAAACGTTCAAGTACAAACATTAT
TTTCTCGTCTTTGGAAGAGCTAGATGTTATTGTACCACTTGATCAAACCT
GCGATCAAAATGTTGAAAGACAAGTTCTTCAAGTCATTGAGGATAGCTCA
TTATTCAATCACTCCCACATCGACGCAGCAGTAGGGTAAGTAGAACTATT
GTATATTGGTACTTTACATACAATACTCATAGTAGCCCTTATTACTTTTT
ACAACGTACTGAAGTGTTTCATTTTAGTATATTCTTGAAAGTTTATTACT
TACAACATAACCTATACTAAGTGCGTAATGTAATATCATTAGTACTAAAA
GAATCGAAGATAAAGAGCACATATCCTCATGGTAAGCTTCATCCGATAAC
ACCCCTCTAAATAATTAATCTTGTGATACCAACGCAACGGAAGCAGATTT
TTCTAAATGCTTTGGTTTTAAagaaagttattttttcttattttttcagg
aaTCTACAACAATTCAGGACTAGGTATATTTacaatgaaataattttcaa
actgtCTTAAGGGCCATGTCTTTTTTTGCTAAGTATTTAAGGAAATGTAA
CTAGTTGAAACCCTACCTCTAGTCTTTGAAGATTTTAGTTTTGTTCAAAG
CTTTTTTAGATAACACAAAGGCTCCTTTATTTTTTGATTGGATTTGGTTT
ATTCGCTCAAACATcgtattttttttctctatagCACAGAGACTAAATCT
TAGCTGTCTTCATGAAAAAGACTGTTTAGATGTCGGTTAGTTTTGAATGT
ATGGAGGGAGCCAGTTACACTCCGGAACTGAATTTTGATTGTAGCCCTGT
CATTGAGGAGAACGTGCTGGCCTTTTCGGATCGGGTTCGCATTGTAAATG
ATGATGTACGTGCATGTAGGCGGTGGATAAATTAGTAACTAGGTTCTTTA
ATACCAGAATTACGCAAGGCTAATTGTGCCATGGCTGGTTGTGCATCCTC
GCCAATTGTCTCAAAATTAGAGAAGAAAGGAGGTAAGCATAATCTTGAGC
AAACTCTTACCCGTCCCAAAGCCATGTCTGTCGAGGGTAAAAGCAGGAAG
AAAAGAATTGGAACAGTAGGAAAATacttttggaaaataatttctgCTTG
GTCGAATCCCCTTTTCATCCTTCCTTGTCTTGTAGACACTTCGGATACGA
ACTTCGAGACACAGCACGTCAGGAGAGAGTGACAATCGATGGAACAGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022816-exon-sc0000434-1491911889:205459..205643 | TCONS_00022816-exon-sc0000434-1491911889:205459..205643 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1510915933:205459..205643 | TCONS_00022816-exon-sc0000434-1510915933:205459..205643 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1575043694:205459..205643 | TCONS_00022816-exon-sc0000434-1575043694:205459..205643 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1491911889:205958..205981 | TCONS_00022816-exon-sc0000434-1491911889:205958..205981 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1510915933:205958..205981 | TCONS_00022816-exon-sc0000434-1510915933:205958..205981 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1575043694:205958..205981 | TCONS_00022816-exon-sc0000434-1575043694:205958..205981 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1491911889:206644..206708 | TCONS_00022816-exon-sc0000434-1491911889:206644..206708 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1510915933:206644..206708 | TCONS_00022816-exon-sc0000434-1510915933:206644..206708 | Clytia hemisphaerica | exon |
| TCONS_00022816-exon-sc0000434-1575043694:206644..206708 | TCONS_00022816-exon-sc0000434-1575043694:206644..206708 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000434 | supercontig | sc0000434:205459..206708 + |
Blast
The following BLAST results are available for this feature:
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