XLOC_012823 (gene) - C. hemisphaerica

Overview


Name	XLOC_012823
Unique Name	XLOC_012823
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000434:205459..214953+

gene from alignment at sc0000434:205459..214953+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_012823 ID=XLOC_012823|Name=XLOC_012823|organism=Clytia hemisphaerica|type=gene|length=9495bp|location=Sequence derived from alignment at sc0000434:205459..214953+ (Clytia hemisphaerica)
GCTGGTCTTGTTTCTCCTACACATACTAAACGTTCAAGTACAAACATTAT
TTTCTCGTCTTTGGAAGAGCTAGATGTTATTGTACCACTTGATCAAACCT
GCGATCAAAATGTTGAAAGACAAGTTCTTCAAGTCATTGAGGATAGCTCA
TTATTCAATCACTCCCACATCGACGCAGCAGTAGGGTAAGTAGAACTATT
GTATATTGGTACTTTACATACAATACTCATAGTAGCCCTTATTACTTTTT
ACAACGTACTGAAGTGTTTCATTTTAGTATATTCTTGAAAGTTTATTACT
TACAACATAACCTATACTAAGTGCGTAATGTAATATCATTAGTACTAAAA
GAATCGAAGATAAAGAGCACATATCCTCATGGTAAGCTTCATCCGATAAC
ACCCCTCTAAATAATTAATCTTGTGATACCAACGCAACGGAAGCAGATTT
TTCTAAATGCTTTGGTTTTAAagaaagttattttttcttattttttcagg
aaTCTACAACAATTCAGGACTAGGTATATTTacaatgaaataattttcaa
actgtCTTAAGGGCCATGTCTTTTTTTGCTAAGTATTTAAGGAAATGTAA
CTAGTTGAAACCCTACCTCTAGTCTTTGAAGATTTTAGTTTTGTTCAAAG
CTTTTTTAGATAACACAAAGGCTCCTTTATTTTTTGATTGGATTTGGTTT
ATTCGCTCAAACATcgtattttttttctctatagCACAGAGACTAAATCT
TAGCTGTCTTCATGAAAAAGACTGTTTAGATGTCGGTTAGTTTTGAATGT
ATGGAGGGAGCCAGTTACACTCCGGAACTGAATTTTGATTGTAGCCCTGT
CATTGAGGAGAACGTGCTGGCCTTTTCGGATCGGGTTCGCATTGTAAATG
ATGATGTACGTGCATGTAGGCGGTGGATAAATTAGTAACTAGGTTCTTTA
ATACCAGAATTACGCAAGGCTAATTGTGCCATGGCTGGTTGTGCATCCTC
GCCAATTGTCTCAAAATTAGAGAAGAAAGGAGGTAAGCATAATCTTGAGC
AAACTCTTACCCGTCCCAAAGCCATGTCTGTCGAGGGTAAAAGCAGGAAG
AAAAGAATTGGAACAGTAGGAAAATacttttggaaaataatttctgCTTG
GTCGAATCCCCTTTTCATCCTTCCTTGTCTTGTAGACACTTCGGATACGA
ACTTCGAGACACAGCACGTCAGGAGAGAGTGACAATCGATGGAACAGAAT
ACATatgtttttatggtaagtttatttttttggaaatgagaAACCTCGAT
TTTCTGTTATAAACGGTTACGTTGGTTTCCCATTTGTTGTACTGTCAAAA
ATGCTGTACATATTTTAATGCTGTACTTTTAATTTCTTGGGAAACGTTCA
TATTCTCTTACTCTTAGgctccaaataaacgggggctatttaaagcaaaa
taaagaaCCTTCTCCTTGaaacctataaatatttttaaaaattaataaaa
gggGGTCCTAATGAGGTCAGGGGGTTTGGAAAACGCTCATATTCTCTaaa
tattctcaaaaaattaagcaGCGGTTGGGGGACGTTTATTTGGAACCAAT
GAGTAACCCTTTTTATCTTATTCTTAAGTTTAATGAACACTTAAGTTTAA
TGAGCACAATCAGAATGTTTTTTGGAAGAGTAAAAAATActtttccaatg
ataccaaaattAACCCTCAGGCTACAAGCTTGTACGGCACTTTATAACAT
TTGGAATTtccaaaaaagtataaaaaacaaTCGACCTTTTCAAAAACAGC
GCCTTTTCTAAAGACCGAAATAAGGGTGTTTTAGCTTTCACgctaattta
ctcaaatttgacCATATTTTGGTGTACTGTTAGGGGTCGATTGTCAAAGT
CATTTTGGGCCTGAGCCTCTCTCTGCTGTCTctaacagaaaaaaataaaa
agttcataCTTTTTGACACCAGCTATAAAGGGCTCCATgtcacttgttcg
acagtacaTTTGGTGGACAGCTCAATTATTCAACATTCTTCAATTTTAAG
ATGAAATTGTCGAACAAATGAGCTGTGGAACAAGTTGAAATCTCAGTTAT
TCATCAGCcagttgtttgaaaatttaattgatCAACAGTAACTTTAttcc
ctttcctatctttcaTTCTAACACTTTTATGATTTGATTTATTGAGAAGA
TGGGATAACGGATGGGAAATAATATTTCTCGAAATTAATAAGGAGAACGT
GGGTTGCAAATACTGACAACCGGAATAGTCAAGCAGAAAGGCCTAGGGTA
TTTTACAAAGACAATCTTTTCTAACTGAAACCTAAGACTTATCAATTTTG
TAAGTggtttaaaagaaagaaaaacccCTCCTGCAATTCCAAGTACTCca
agaaaaaactttattctttcttctttccaaaccgggtactaggtttgcga
ggtgaaaAAGAGAttagagagagaaaaaattggcgtttttgggaccctta
gagagactttttcccaaaatgtttgtcgattttcactcgatttttgtcca
aatttttggaAACCANCCCCAAATCTTTTTCACTCGACTTTtgtccaaaa
ttttggaaaccACGACCCTTTGATAGAGAAAAATTCGATTACAGAGAatc
aatttgctttttaatgctttttgtacccctttgagagactttcaagGGTG
TGAAAAATGGACCCTTTATGACTGGGGGTGTTTGCGAGgcttgaaaatgc
tctaaaaatagcattcttagctttagtagcaaaattccatgatggtgata
ttcttagcatattcttaattttttggccaatttcatcatggacattctta
taaagtgtattcttataaaaaagggtgtattttgatttggttttgttaca
tgtttatttttggcattttcatataatttttaaaaacaaaagggaGAAAT
TTCAAGCGATATCATATAGTCATACTGGCTAGAGCAAACGTTATAGAAAT
TCAAGAATGCAAAGTTCGGggcaaaaattactgtagggtaAAACCGcgat
aggatttcctaccaaagaaatcacgtgacaataagcaatttcactggttt
gagagatgcgaaatagcgtttgccgcctacttttttttatctcgcgctcc
gaaaacaattaaaatgctagagcCTATCCATTCACACGAAATTTAAaagg
tcaaatttttgcttcacttttttttgctggcgAAAGCTTAatcctttaag
tgccacggtcatttttttctaagttttttaaagaaaatcgctattTCAAa
ctttactcttaggtgccaaataaacgccccccccccccccccgNagaagg
agttagaagcttgtTTATAGTCCggtggatagcttagagtctcctctttc
ttttaggcgcctGGGGCCTTAGGCGGACTtgactgaatgatagaaaggtg
ccgagcggtaaaacttcaaactaattcgctggaggacagaatcaagttaa
tcagggtcaaatttggaggttcttggatcactcgttgaccaaaaatgttg
aaaaacggtcaaaatcttaaaaaagtggatttttgtcaaatttttccttt
tttttttgacttttcagcttaaaatctcgctgaaaagactcacttttgat
tttttttttgcttggccatGACGCCCAATCTGATTCCTACGAGTtggacc
aaaaatgacgatttctaattCAAACATGACATTACAGGAGGGCTAAAGCT
GCCTATCTAGTAAAAACCAATTGGTATCAAATGACAAATGTAAGATTTTT
TAACCTTAtaaatcttaaattttcgagtcattttgtcttttatgttttaa
agtaatttaaaaagaagaaaatcttttacgATATTGGGAGGTCTCTAGAA
AGCATCAAATGAAATCGACAGGAGTGTTGTCAATTTCATTCTCAAGGgag
ttttttttatcatataaAGAGAAATATCTGGTGCGTTTTTTCATTCATNA
GGAGTGTTGTCAATTTCATTCACAAGGGAGTTTTTTTGGCATACAGGAAA
actgggaggcgggaggcgggaggctgaaccgggagccgggagtcgggagg
ctgaaatcgaaagtgggaggcgggaggcgggaggctNttattttttataa
acacacacaatccatcaaaaaaaatatttcaaatagtaTGTTATCATCCG
TTTCCGttcaaaaaaagtgtttccTCGATTTACGTTTTCGGCAAAACATT
CCCGAACGGATTTCTAGAACTTAGCATCGCTTATGGCTGGCGCTAAGCAA
GTATTAGTGTTATTCTGATCGGAATACTCTCAAATGATTACGCCAGTATC
gacaaaataacaatgaaaatccTGCCTATTGTTTGTATGCgcgaatgaaa
atgttttacgCAATTACATTACGTCATTTTTTATTACTTTTTATGGTAAT
ATAAACACATTTGCTCTCGCTTAACAAATATGATTaattagctcagtcgg
tagagcatcagacacAAGGTCAGATGgtccagggttcgattcccgcactc
atatttttttttcttttctaaactaatctatccacagggatcaaaaatat
ttcagacctaatcaaaaatattgatttttcaagcacgGAGGACGAGAAAT
TTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCGAAAATCGCCCCTTTGAGagataaaattttga
tgattttgggaccctttgagagattttttccctaaatttagtttaaaagt
cTGTACTAGACGGACACGGTCCTCCGCCTACTTTGAAGTGTTTAAAATTG
GTTGGCTAGTCAGACAGGCTAATAACGTCTTTTCTGAAACAAATAttctt
ttgacactttttgcCGGACAAAATCGGTTCGGAAAAACTGGAGCAACCTT
CGATTGCCTTATCGGACTTTTTAGCTGTTGGACNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATCATTGTTCACTT
CTCTTGCACATCAGCTGCGTGGCCGAGTGGATAAGTCGATGAAACGGCAA
CTTAAGGGTAATGATTATAGAGAGTTTGAATCCTATAAAGGGTGCGACGA
AAATTGTgttattttgtctgttttgtcaacattgatcaaactttttctgg
ttttatcgCCTTGCgacttacaattttttttcaaaactgaaaatttgacc
ccggctcgaacttccaaagtctcttGTCAATAATTCTGAGTCCGGCACGC
TAGCAATGTACTATCAAGCCAATACGAAACATGCAGTTCAAAAATCATTA
TACAAAACACTACTGCATATACGGGTGAACTAACCTTGGACCTCATGGGC
TAGGCTAACTGTTTAGATCAATTACATACTCCAGGCTCCGTAAGGATCCt
tattataattgaaaaagCGTATACTAACAAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcctcccgcctcccact
ttcgatttcagcctcccgactcccggctcccggttcagcctcccgcctcc
cggctcCCAGTTTTCCTGTATGCCGTTTTTTTATCATATAAAGAGAAATA
TCTGATGCgtattttcattcatttcttaTTTAATTCGGTGGGGCTTGTTG
AGTGGTTGTTTGGGCACATATAGAAAGTTAATACTATTTTTGGAATAATA
TTTCAGGTTAAATAATTTATTATACAGTAGAAGGAATTTTGTCTGAAAAA
GTTCTGTAGACATGTTGAAAATATTAGTTTGCTCTGAGAAAAGATTTGTC
AAAGTCTTTAATTCGGGAGAAGCAGAACATTTGATCGACTAAGATGTTCA
TCTAAAGCCATATAAAGTTTAAATCTTTTACCCAAGTTTAGATAATTTTT
CGAATTTCCCTCTTGGAAAAAACCATCGAAACATTGGGCGCTTTTTGCAG
ACTAAAACTAAACGTAATTTTGTGATCATCAGCAAACGATTGATTTACAT
ATCtgaatcaaaattttttcaaattttatttttaagtatcTTTCTCGTTT
TTTTTCCCTTCAAACTTTTAAGTCCGAAAGAATAATGACggaattattaa
aatttttggttttaccttataaaaaaagctattTCTTTACTGAGCGAAAA
GTTcttaactaaattttttttctctatcaATTTGGAAAAACCATTTTCcc
aatctttgtgcaaaattttgactttgaacGATTTTCAGTTCTCTAGATAT
CGAAGTTCAGTTTAAATTTTTTGCAGTCatgaataaaaatgatttattgc
ttggcaaaaagttttcattcaaaattgaaaatttttttgccatcaattcg
gaaatatttttctcgttctgtttgcaaaatttcagcttcaaaataatttt
agttccTGAGATATCGagattcattttttgttgaattttttttttttact
ccgtgaaaagtttgaatttcttctttatttcttcagatgtttggaaaatt
ttggaggaaaagaaattcgcgaaattcgaagaaattttCCACCAAAAACC
GAACATCGTCAACTCGTTGCGTGATGGTCTTGGTGTGACACTTCTCATGG
AGGCTGTTTGTGAAAATCGTTTCGACGTTTTCGTTCACTTGATGGATTAT
CCTCAAGATTTTTCACTCGTGGACAGTCGTGGTATGAACATTCTTCATTG
GATTGGTGCGAATGGACAAGTTCGTTTGGAAAAGTTTGATCAACAAACAA
TCGAAATGTTGATCGATGGAAGAGACGAAGATAACAAAACACCATTGCAT
TTTGCAGCATGGTTCaacaatcatgacgtcatcagatggtTGTTGGCCAA
AGGAGCGGACGctgaattgaaaaacaaagctgGTCAACGCCCTGATGAAC
ATCGTGATTGTAATGGTGTTACCAAAGAAATCTTTCGATCGTTTCGTTCG
TCTtggtaagaaaaatatcaactttttcatgattttttttaggattgaat
tattttttggaaagaatcttttttttattactgCGAGAagtgttgaaact
ttttttaattttttaagtaGAAGTGAAAAGTTATTcaagctaaggctaca
ctgagCAATTTTTTCAGGCGCGTGCAGCGCAATTAGCAACAATTATTGCA
TTGCACGCGCCTGAAAAAATTGctcagtgtagccttagctttagaaagtc
tttaaatttttcaatcggataaatttttccttttcggAGTTCGAATGAAT
GAAACGGAtgaattgagatttttcattgcaATGGAGCAGACATATTTTGG
AGACGGTTGAAATTTGCAAAGAGAAATGTTTTCTCAGATTGTTATGAGTT
TATTTTTTGGTGGAGAAAGAAATTGtcgttttttgttatttttcgtaCGT
CTCTTATGATATTGTTTAtatgtttcaaatgtttttcattcgATTATTNA
ATAGATGTCTGTGAAATGTTTTCTCAGAttgttatgaatttattttttgg
tgaagaaagaaatcgtcgtttttctgttattttttgACGTCTCTTATGAT
ATTGTTTAtatgtttcaaatgtttttcattcgattatttaattttcagat
tgattgattttttccATTGTTTGTTTCATCGtttccaatgacgtcatcga
ttccAAATTATTTCCACGTAAGTATATTTAATCATGTATTCGGTTTCCGG
CTAATGTGAAATTGCCTAAAGCCTAAATCTTTCTGCACAccagatttttt
tgtaaaaagtgaatCCATTTAAAACAGTTAGAAAGGAGGGTTACGGTTAg
tctgtaccaaactcttccaCTACATCAGATTTTCAGCATTCTCATTAGcc
gctttaaaaaaaaacaacatttattCATGTCAGCAAGTTTCGTTTAGCAA
ATTAAcctccaaaattttcaaatttttatttttagattcccAGCATGACA
GCACGCATGAGAAGTTACACCAGTCGTTTTTGACGCCGTTTCTCTACGAT
TACATTTCTTATTCATGCTTGTTTTTAGATGTATTTTCAGCACTTCACTA
ACTTGACTATCATTACGTCAACCGTCACTAGTTTCGGTGGTGTGTCTATT
CTTACGCCCTTACCTTCCCGCCTTATGGATTACCTTAGTTGAATATGAAA
AAGACTACAGTGCTAAAACTCATGTCGCTTTTGATTTCGATTGGATCATT
TCCCTTGTAAATATCCGACTCTTTTTGCTAACTCGGTGATGAGATTTTGT
TCATCAGTCAGTCAGGGAAAAAAATTTAGATACTATTTTTAGTGGAAAAC
CCTGTCAACAGTGTGACCTCGGTGAAAACATGAATTTTTCTAACC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00022816	TCONS_00022816	Clytia hemisphaerica	transcript
TCONS_00022817	TCONS_00022817	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00022817-protein	TCONS_00022817-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000434	supercontig	sc0000434:205459..214953 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25	0.32	0.18	0	0.26	0.04	2.32	1.74	0.94	1.03	2.26	1.75	10.19	4.88	8.73	6.05	4.33	4.15	19.68	15.7	6.17	3.26	5.78	6.31	3.7	6.8	21.04	9.8	28.79	34.35

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XLOC_012823 (gene) - C. hemisphaerica