TCONS_00020544 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020544
Unique NameTCONS_00020544
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3040

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020544 ID=TCONS_00020544|Name=TCONS_00020544|organism=Clytia hemisphaerica|type=transcript|length=3040bp
TAGTTATATAAAAATGGGTCACAAATTAACAAGTTGATAAAGATTTGAGG
GATAAAATGATGTCTGCTAGACAATTTCTTGTTCGCCAATGTCTGGCTAG
AGTACACCAATGTCGATACACCAGCTCAACAACATCCAGTACTCCAATTA
AAAGATACAGTAGCATGTTAGAACTTGGTGTCATGAAAACAGACCAATCA
CAATTTGCTGCAATGCTTCAACTTCAGAAACTCTTCAATAACATCAAGAG
TTATAACCCTGATCAATTAAgtaaagACTCCAACCAACCAAGGGGACTTT
ATTTACACGGTGGTGTGGGTACAGGCAAGACAATGCTTCTAGACATCTTT
TATGATAATGTCCCTACAGAAAAGAAGAAGAGGGTACATTTTAATGCCTT
TATGTTGTACCTGTACTCAGAAATTAACCGTTGGAATCTTTGTTGTGATG
AGAATGTAGACCATACTTCACCGGTTGAACACATTGCAAATAAGATTATG
CAGGATACTTGGCTTCTTTGCTTTGACGAGATCCAAATCAGTGATTATGC
ATCGTTCACATTATTGGAAGGAGTTCTTGGATACATGATATCTCAAGGTG
CTGTCATTGTTGGTACTTCCAACAGGTCACCAGAGGAGTTGAGTAACTCT
TCCATATCTGGTGAAAATGATGAAGTGGAAGTTAAGAAACCATCCTCGTT
CTACAGTCTGTTTGCTGAGAATTGTGATATTCATCATGTGGAATCTGAGC
GTGATCACCGTATGGAGATGCATGAAGGAGAATGTAGATTCTTGTATCCA
GTCGCACCTGAGAATAAGAAACAACTTGATATGATGTTTGCAAAACTTAT
TGAACCCGGACAACGGATTTCATCCGAATTCTTAGAGATTTATAATAGAA
AGATCCTCATTCCAGTTGCTTGTGGTGAAGTTGCCAGATTCCATTTTAAA
GAGTTATTCATGCGACCGTATGGTCCTGCTGATTATATTAAGATATGCAA
TGAATATAGTCATATCTTTATTGATGAGATTCCACGTATGACTATTAACC
AGAAGAACGAGGCGAGACGTCTGTTGACTTTTATCGATGCCGCTTATGAA
ACTAGAGCTAAGATTTATTGCACTGCTGAGTCAACAGCTGAGGATTTATT
CATGATGCTTCCCAGAAATGATGAGAACTATGAGGTAGAACAAATGCATT
TGGAAATGATCGGTGAAATCGCGTATGATTTAAAATTAGCTGGATTggat
tttaaatctttaaatttgatttctggtgaagatgaaattttctcttttaa
acGTGCTATAAGTCGTTTAAATGAAatgcaaagtgaattttatcaGTCCA
CTGAATATCGTAAACAGTTATTTGTGCCGTACATTGGTACGGAAGCCGAG
AAAATGAACGCGGAAGAGAAACGACGCACGCGCGAGAAAATGAGGCTTCA
GAAACAGGCTAAAGAGCAGGACGCACAAAACGAAACTCAGACTGAAGAAG
ATTGGTCTATTCCTAATCGAGACTATAAAGAAACAGACTGGGGAGACGAG
GAGACCCACCGCCGGACAAAAGACGCTGAAAGGTCCATggaacgttatat
ggacgtccTGAATGTTGAATGGACGTGGTTTGGATGTTTTGGGACGACTG
GACAGGAAAAGGAAAACCATGGAAATCTGATTGTGAAAAATGGACATTTT
CTTTTAATCTTCATAAACAATAACGACACAAACAGCTTAAAAACAAGACG
AAATGAAAGCTATCATTTTGCTGGTATTACTTGGTTTATTCAAACTACAC
GCTGCAGAGGTACTGGATGCTGATGGGAATCCTTTAAGTGATGACGAAAT
CCGAGAGATTGGTAATGCTGTTCCAAGTCCATTTAACCTTCCATTCTCTA
AAGAAATCAAAGCAAAAGATGTTGTTATCAAAGACCCACATGCTGTATCC
CTCTCTGGATCATTAAGTGCATTAGCTCCAACTTACCCACCTGAAGTGGA
TCACGATGAAGgcaacaataaatttatttctaaatttaaaattataagcC
AAACTAAGAAGAGATCAAACTCAACAGTAACACGACCACCACATCTTCAT
CAAAAGGACTCAGACAAAATCGAACAAAAACGACTTCATCGTTTGAGAAT
CGCACGACGCAAACAACGACTTCACCGACTTAACAAACTTAGACATAATC
GTAGAAAACGACCTCACCATAGAAGACCTCATAAGAAACCAACCAAAAAG
CCAACTGAAAAACCGACTGAAAAACCAACCGAAAAACCGACCGAAAAACC
AACTACAAAGAAGCCACATAGAAAACGACCTCACCATAGAAGACCTCACC
ATAAAAGACCTCATAAGAAACCAACCAAAAAGCCAACTGAAAAACCAACT
GAAAAACCGACCGAAAAACCAACTACAAAGAAACCACATAGAAAACGACC
TCACCACAAAAGACCTCATAAGAAACCGACCGAAAAACCGACCGAAAAAC
CGACCGAAAAGCCGACTGAAAAACCGACGGAAAAGCCACATGATCCTCAC
GACCACCACAAACCCGACAATCCAAACTTTTGCCGTGATGCAGGTATCTC
ATGTGATAGATCATGTACCGGATGTGAACCAGCTGGATTCTGTATCATGC
CCGAAAAAAACCACCACGCAATCAGATGCGTTTGTAACTTCGGATGGACT
GGTAAAAATGCAGTGTTCATGAAACCCTCAGCTGATTCGAAACTCAATAA
TATTATTATTGCTGACGACTGTAGTGTTGCATGTCAAAACACCAATGACC
GAAAAGGaacCAAATGCGCCAAAACGCAACACTGACAACACAAAAACAAA
TACTTGCAGCTTTTGACTAGCCTGCAAAACTTGGGACATTTTATCATAGT
ATgattttataaagactttgtaaAAGTTCTcgtcttttcaatttttttat
attctatATTTTTTTACATACTGAATTGAAGCATATAATACTGTATATTC
GTAACgacgcaaaaaaataaaatatactcATCATCCCGAA
Run BLAST on NCBI

protein sequence of TCONS_00020544-protein

>TCONS_00020544-protein ID=TCONS_00020544-protein|Name=TCONS_00020544-protein|organism=Clytia hemisphaerica|type=polypeptide|length=588bp
MMSARQFLVRQCLARVHQCRYTSSTTSSTPIKRYSSMLELGVMKTDQSQF
AAMLQLQKLFNNIKSYNPDQLSKDSNQPRGLYLHGGVGTGKTMLLDIFYD
NVPTEKKKRVHFNAFMLYLYSEINRWNLCCDENVDHTSPVEHIANKIMQD
TWLLCFDEIQISDYASFTLLEGVLGYMISQGAVIVGTSNRSPEELSNSSI
SGENDEVEVKKPSSFYSLFAENCDIHHVESERDHRMEMHEGECRFLYPVA
PENKKQLDMMFAKLIEPGQRISSEFLEIYNRKILIPVACGEVARFHFKEL
FMRPYGPADYIKICNEYSHIFIDEIPRMTINQKNEARRLLTFIDAAYETR
AKIYCTAESTAEDLFMMLPRNDENYEVEQMHLEMIGEIAYDLKLAGLDFK
SLNLISGEDEIFSFKRAISRLNEMQSEFYQSTEYRKQLFVPYIGTEAEKM
NAEEKRRTREKMRLQKQAKEQDAQNETQTEEDWSIPNRDYKETDWGDEET
HRRTKDAERSMERYMDVLNVEWTWFGCFGTTGQEKENHGNLIVKNGHFLL
IFINNNDTNSLKTRRNESYHFAGITWFIQTTRCRGTGC
Run BLAST on NCBI

transcript from alignment at sc0000358:27643..35330+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020544 ID=TCONS_00020544|Name=TCONS_00020544|organism=Clytia hemisphaerica|type=transcript|length=7688bp|location=Sequence derived from alignment at sc0000358:27643..35330+ (Clytia hemisphaerica)
TAGTTATATAAAAATGGGTCACAAATTAACAAGTTGATAAAGATTTGAGG
GATAAAATGATGTCTGCTAGACAATTTCTTGTTCGCCAATGTCTGGCTAG
AGTACACCAATGTCGATACACCAGCTCAACAACATCCAGTACTCCAATTA
AAAGATACAGTAGCATGTTAGAACTTGGTGTCATGAAAACAGACCAATCA
CAATTTGCTGCAATGCTTCAACTTCAGAAACTCTTCAATAACATCAAGAG
TTATAACCCTGATCAATTAAgtaaaggtaatttttttgaaaacatttgtt
ATAAAAGATCTCAAAGAATGAATACGTAATCCCTGTCAACCACACACAAA
TAAGTTATTTTCTAACCAAGCACAGATCACCAGTCTtagaacaaaaattt
gaatttcaagGTTAATTTATTTTAGGATCCAAGTTTTTCTGATACTTAGG
TCACACACTCGAATGAAATGATCCATACATACCtacttttttacttaaaa
aaaataaagttgaaaGCAAAAAATATCTGAGGCTCCTAATATATTCATTG
TATATCTATTTCAGACTCCAACCAACCAAGGGGACTTTATTTACACGGTG
GTGTGGGTACAGGCAAGACAATGCTTCTAGACATCTTTTATGATAATGTC
CCTACAGAAAAGAAGAAGAGGGTACATTTTAATGCCTTTATGTTGTACCT
GTACTCAGAAATTAACCGTTGGAATCTTTGTTGTGATGAGAATGTAGACC
ATACTTCACCGGTTGAACACATTGCAAATAAGATTATGCAGGTGAGTGTG
ANGAATGTAGACCATACTTCACCAGTTGAACACATTGCAAATAAGATTAT
GCAGGTGAGTGTGATGATTTCTGCACCGTGTGAGcacaaattttaagaaa
tcCATTTGTTAATTTTGCTTTGCCAGCATTAGATGCGCCCTGTTCACTTC
AAGTACTGCAAAGCAAATGGTgtgtttttctctaaaatttatCATGCTGT
TTCACTTGGTAGAGAACTCTTAAAGCAACACTTAAGCTTCAACTTTTATG
ATTAATAATTTCATTACAGGATACTTGGCTTCTTTGCTTTGACGAGATCC
AAATCAGTGATTATGCATCGTTCACATTATTGGAAGGAGTTCTTGGATAC
ATGATATCTCAAGGTGCTGTCATTGTTGGTACTTCCAACAGGTCACCAGA
GGAGTTGAGTAACTCTTCCATATCTGGTGAAAATGATGAAGTGGAAGTTA
AGAAACCATCCTCGTTCTACAGTCTGTTTGCTGAGAATTGTGATATTCAT
CATGTGGAATCTGAGCGTGATCACCGTATGGAGATGCATGAAGGAGAATG
TAGATTCTTGTATCCAGTCGCACCTGAGAATAAGAAACAACTTGATATGA
TGTTTGCAAAACTTATTGAACCCGGACAACGGATTTCATCCGAATTCTTA
GAGATTTATAATAGAAAGATCCTCATTCCAGTTGCTTGTGGTGAAGTTGC
CAGATTCCATTTTAAAGAGTTATTCATGCGACCGTATGGTCCTGCTGATT
ATATTAAGATATGCAATGAATATAGTCATATCTTTATTGATGAGATTCCA
CGTATGACTATTAACCAGAAGAACGAGGCGAGACGTCTGTTGACTTTTAT
CGATGCCGCTTATGAAACTAGAGCTAAGATTTATTGCACTGCTGAGTCAA
CAGCTGAGGATTTATTCATGATGCTTCCCAGAAATGATGAGAACTATGAG
GTAGAACAAATGCATTTGGAAATGATCGGTGAAATCGCGTATGATTTAAA
ATTAGCTGGATTggattttaaatctttaaatttgatttctggtgaagatg
aaattttctcttttaaacGTGCTATAAGTCGTTTAAATGAAatgcaaagt
gaattttatcaGTCCACTGAATATCGTAAACAGTTATTTGTGCCGTACAT
TGGTACGGAAGCCGAGAAAATGAACGCGGAAGAGAAACGACGCACGCGCG
AGAAAATGAGGCTTCAGAAACAGGCTAAAGAGCAGGACGCACAAAACGAA
ACTCAGACTGAAGAAGATTGGTCTATTCCTAATCGAGACTATAAAGAAAC
AGACTGGGGAGACGAGGCAAGTTACACTAGCCTGAGTCAGGAAGCAGCCG
CTGTTCATTTGAAAAGACATGTGTCTGAACGGCAAAAAGATGCTCCGAAA
TTTGGTGCACAACATTTTTGGGGGTTTGGATGGTGGGAACatgttaaaaa
taaaatcaaaaagaaaaacgaaaccgaatgaaatttcattttcaaatatg
aTGAAGTATGATTGTTtctaaaactttttcatttaaatgttttatttata
acCCCCTGCTATTTTTTGAGACATAGTTATTATCTTAGATTGAATATTTT
TAGCCTACGTGATAGTGATCGAAACATTGTAAATCATACTTCTTTGAAAA
GTAATCgaatttatcaattttgaaaatgcAGTTAATTTAAGGTCTTTCTC
AAGAGAAGTTGATTCACTAATagtatttcaaaacaaagtccttatacaag
attattttttttcgaattattgGGGAACTCCATATGGAAATTAGTTATGT
CCTAAAATTGAATAGGTTTTTTAAAACAGTGTCCTTCcgaaagaattttt
taaaaaattgtttcatttttttgtttagctTCATGTTTTTGAAACATTAT
CCTATTTTCGGAAGAAAGTGTTCATAACTATCATAGATTGTCATTAAGGT
AATAGGGGGATCATTGATATAATTACTTCTAATGACTTTTATTATTTGTT
TGTGGGAGGATTGTAACTGATACCTctttaaattgttttgatttaatgag
GTAATTAAAAATGCTATTTGTTAAAAGAAACATTTTGGAGGCACTTAATA
ACAACAAGAATACCCTTTCCTACTAGTACTGGATGGAACTCTGCTTCTAA
ACCGTTTAAACAGCTTTCAGATTCGTAAATAATGATAGATAGAAACAttt
aagaacttttaaaattttagaacTCAGAGAAGCTTAGAAACAAACGTTAT
AATTCTTCCGCCTTTTGTTCATAACTTGTTTTCCATAAATAATAGTGATT
ACAGGTTTTCTAAGTTTATGAACATGACAACATgctaacaaaatcaaaaa
taaaaacatttttaatccTATACCATTCCAGCTTTTCCGCAGCACCCGTT
TGTAAAGTTCGACCGCCCGGTATCGCATTATGATCATTCAAGAAGTAATT
TGTACATTTGAAAAACTgttctttgtttttgatttcccaTAACACATTAT
TTATATAATTCAGCATGTTTCTATTACTTTCTATATGATGTAAGATGAGT
TTGACCAGAAATACGGACAGCAAAAGCCGCAGCTTAAAGTCCTGAAACAC
GAGGCTTATAAGTTGTTTTTATGTGAATTAAGTTACCAACAATTTTGTAC
CGCtctaaaaatttacaaaattaaaaagtctaTTTTGAATAGCTTCTAGG
GCATTCCACAATAATTCTTACACTCGCAAGTTTCGTAATTTGTTAAAGCT
GGTTTAATGTGTATGAgtattttaagagttttaaaatGTCTTAACGTTCC
TTgtcattttgttgttgttaatCTAGCTTAACCTTTTGTGCGCgctcttt
attttgaaaaagttgaaatttttctagtttgttttttaaaactCACTCAA
ACTAATTTCTTCAACATCaatttactcttaggttccaaataaacagaggg
gcctaattgccgggggatTGGAAATAGTACTTCTGAAAACACAAAAATGA
GGtaaaatataggctaaaatcaggctatttagagcaaaatagggggcctt
ctctttgacatctgaaaatattcttaagaatTTATAAACGGGGAAGGGGT
CCTATTAAGGTCCGGGGgggatttttcgaaaaattaacaagcgagAAGGG
GGAAACCTATAAGAGTAATAATACATTGAACCATTATGATGAATTTGTAG
CAAAACATACTTAATtaaatttgtttcttttattcaGGACACTATTATTG
ATTGATCTGTCAGCTATTGAATAATGGATAATTTTTCATAATAAACTTCA
AGATCCTGACTCTATAACGGTGGTTACAGAAGGTACTCAAAATTAACGAT
GGAGAGcttttcttttattattattccTTTTATGGAAATAATTGCTCTCC
GTCATAAAGAGTTTTGAGTACTTTCTATAAACGACGTTGTTCTATACAAG
GATACTTTCAGGAGACCCACCGCCGGACAAAAGACGCTGAAAGGTCCATg
gaacgttatatggacgtccTGAATGTTGAATGGACGTGGTTTGGATGTTT
TGGGACGACTGGACAGGAAAAGGAAAACCATGGAAATCTGATTGTGAAAA
ATGGACATTTTCTTTTAATCTTCATAAACAATAACGACACAAACAGGTAA
TTAAAATAATACAGAGGTACAAATCTATTCAATTTCTCTTAATCCCTTTT
ATCCCTTTCTTTTGTTGATTATGATAAACTTCCATTACAAAAACATTCAT
TTGTTACAAACgatgaaaatctttttgttcTATTGTTCTATTGTTTTCGC
TCGTAATTACCAAACTTCATTTTCtccaaagaaaaacaacaaacattttc
attcaaaacaGAGTGCaggaaatttaaaacaatgcAATTGTAAAACTCGA
ACGCAGTATAAAATGTTAGCCCATCCCAATTATTGAGACATAGATTTTTT
GTGGTTTTCAGCTTAAAAACAAGACGAAATGAAAGCTATCATTTTGCTGG
TATTACTTGGTTTATTCAAACTACACGCTGCAGAGGTACTGGATGCTGAT
GGGAATCCTTTAAGTAAGAttaattttaaaggttttgtttttaaataaga
atgatatcgtttgcttactcatcaattttaatttacaagcttttggatat
tgaattgacacggatgtggatttttttttgcttatatcagcataataggc
agacactgtcctagTATGAAACATACGTCTGATATGAAGCGGGAACACCT
TCAAGTTTCAGAATTATGGCTCGAAGTATATGGTCACTcgctttttaaac
attttctcaTCACGCGACGTTAAAAAGCTATAAACCGTTGAGAAGATACA
TCTTAAGAGAGTGatataaaagatttttgaacaaCGTGTGACGGCtattt
tcggtcatttttggcCGTTTTAGCCCTACTTCATAGGACTGTAACTTTTT
ATCGAagagaaatataaaaaactGAACACAGATATAAAATCAGCTAAGGT
TTAAAATAATATTCTTAAAGTGTCATTTTCGAACCATCACTAGTagaaca
aatttctttttttatttttttattctttatctttgttcttcatttttcag
ttttttgaaattttgttaacattttggATTAGTTTTCTCGGAAATATTTT
TCCGATGGCGTTTGATTTTAACCTAAAAGTACATTAAGTTATACAAACCA
CAAAGAAGAACCGAAAGCAGCCGACGTTGCTACCTTTtattttccgatgt
gttctgagtgtatgtttcagctagaaattttgatctgttctgattagagC
TTCGTAAATCAATTAACTAGAAATTTTAACGTGTTTTGATGATACAGGGG
TATATGAGGGTATATGATATCTAAGTAaccagaacacatcttttaaggag
acaggggtaaAAAACCAAGacaaaattgatgtaatcttgttgcctagtaa
ccctagagAGGTTCAGAATACATCTGCCATGGGAAAAAAATCCAACGTCT
TAAAGTTAtctatagaaaaacaaaactttttgatttcagAACACGTTCAA
ACATAAAATAATGATAACCTTACGAAGACAAAacaaaggtttcctagaaa
tcagaacacatcattagtATGTGTATCCTCGAAGAAAAACTACCCATTTT
TCTTGAGAGTCAAAGATATACATATATTAGCCTTTTTAACCATTTTCTTA
CATTTACACATTTCAGGTGATGACGAAATCCGAGAGATTGGTAATGCTGT
TCCAAGTCCATTTAACCTTCCATTCTCTAAAGAAATCAAAGCAAAAGATG
TTGTTATCAAAGACCCACATGCTGTATCCCTCTCTGGATCATTAAGTGCA
TTAGCTCCAACTTACCCACCTGAAGTGGATCACGATGAAGgcaacaataa
atttatttctaaatttaaaattataagcCAAACTAAGAAGAGATCAAACT
CAACAGTAACACGACCACCACATCTTCATCAAAAGGACTCAGACAAAATC
GAACAAAAACGACTTCATCGTTTGAGAATCGCACGACGCAAACAACGACT
TCACCGACTTAACAAACTTAGACATAATCGTAGAAAACGACCTCACCATA
GAAGACCTCATAAGAAACCAACCAAAAAGCCAACTGAAAAACCGACTGAA
AAACCAACCGAAAAACCGACCGAAAAACCAACTACAAAGAAGCCACATAG
AAAACGACCTCACCATAGAAGACCTCACCATAAAAGACCTCATAAGAAAC
CAACCAAAAAGCCAACTGAAAAACCAACTGAAAAACCGACCGAAAAACCA
ACTACAAAGAAACCACATAGAAAACGACCTCACCACAAAAGACCTCATAA
GAAACCGACCGAAAAACCGACCGAAAAACCGACCGAAAAGCCGACTGAAA
AACCGACGGAAAAGCCACATGATCCTCACGACCACCACAAACCCGACAAT
CCAAACTTTTGCCGTGATGCAGGTATGTTTATGCCATATTTTTCTGTTTA
GATTAAAATTAAGACGGGAATTCCACTTCCACTCAATTAAGAAAGTGTTT
CTGTACTTCGAACTCAAACTACGCGGctttcgtttgtttgaAAAATCTTA
TAAATTATTCTCAAATCCCCTTTTGACTTATGGAGAAAGTTCTCAATTCT
TTGAAGATTGAATAAGAAGCGATGTATTTCAATGTTTTAATTGTGCCACG
CTGCTTGTTCAAAGTTTAAAGTGATACATCGACCATTTAACTGGCTAGTT
AAATATTAGCTTcttgttttcctttttcaatataattttttcATATCTTA
AAAGGTATCTCATGTGATAGATCATGTACCGGATGTGAACCAGCTGGATT
CTGTATCATGCCCGAAAAAAACCACCACGCAATCAGATGCGTTTGTAACT
TCGGATGGACTGGTAAAAATGCAGTGTTCATGAAACCCTCAGCTGATTCG
AAACTCAATAATATTATTATTGCTGACGACTGTAGTGTTGCATGTCAAAA
CACCAATGACCGAAAAGGGTAAGTTCCTAATTGCATAAATTTCTGCTCAT
TTCTAACGAAAAACTTTCTTACAGATTTATTAACTACTCATTCGCTCGAT
TCCACAATTTTACTATTCATTCTAAAATAATaatatcatatttttcaatt
ttcagaacCAAATGCGCCAAAACGCAACACTGACAACACAAAAACAAATA
CTTGCAGCTTTTGACTAGCCTGCAAAACTTGGGACATTTTATCATAGTAT
gattttataaagactttgtaaAAGTTCTcgtcttttcaatttttttatat
tctatATTTTTTTACATACTGAATTGAAGCATATAATACTGTATATTCGT
AACgacgcaaaaaaataaaatatactcATCATCCCGAA

Coding sequence (CDS) from alignment at sc0000358:27643..35330+

>TCONS_00020544 ID=TCONS_00020544|Name=TCONS_00020544|organism=Clytia hemisphaerica|type=CDS|length=8835bp|location=Sequence derived from alignment at sc0000358:27643..35330+ (Clytia hemisphaerica)
ATGATGTCTGCTAGACAATTTCTTGTTCGCCAATGTCTGGCTAGAGTACA
CCAATGTCGATACACCAGCTCAACAACATCCAGTACTCCAATTAAAAGAT
ACAGTAGCATGTTAGAACTTGGTGTCATGAAAACAGACCAATCACAATTT
GCTGCAATGCTTCAACTTCAGAAACTCTTCAATAACATCAAGAGTTATAA
CCCTGATCAATTAAgtaaagACTCCAACCAACCAAGGGGACTTTATTTAC
ACGGTGGTGTGGGTACAGGCAAGACAATGCTTCTAGACATCTTTTATGAT
AATGTCCCTACAGAAAAGAAGAAGAGGGTACATTTTAATGCCTTTATGTT
GTACCTGTACTCAGAAATTAACCGTTGGAATCTTTGTTGTGATGAGAATG
TAGACCATACTTCACCGGTTGAACACATTGCAAATAAGATTATGCAGGAT
ACTTGGCTTCTTTGCTTTGACGAGATCCAAATCAGTGATTATGCATCGTT
CACATTATTGGAAGGAGTTCTTGGATACATGATATCTCAAGGTGCTGTCA
TTGTTGGTACTTCCAACAGGTCACCAGAGGAGTTGAGTAACTCTTCCATA
TCTGGTGAAAATGATGAAGTGGAAGTTAAGAAACCATCCTCGTTCTACAG
TCTGTTTGCTGAGAATTGTGATATTCATCATGTGGAATCTGAGCGTGATC
ACCGTATGGAGATGCATGAAGGAGAATGTAGATTCTTGTATCCAGTCGCA
CCTGAGAATAAGAAACAACTTGATATGATGTTTGCAAAACTTATTGAACC
CGGACAACGGATTTCATCCGAATTCTTAGAGATTTATAATAGAAAGATCC
TCATTCCAGTTGCTTGTGGTGAAGTTGCCAGATTCCATTTTAAAGAGTTA
TTCATGCGACCGTATGGTCCTGCTGATTATATTAAGATATGCAATGAATA
TAGTCATATCTTTATTGATGAGATTCCACGTATGACTATTAACCAGAAGA
ACGAGGCGAGACGTCTGTTGACTTTTATCGATGCCGCTTATGAAACTAGA
GCTAAGATTTATTGCACTGCTGAGTCAACAGCTGAGGATTTATTCATGAT
GCTTCCCAGAAATGATGAGAACTATGAGGTAGAACAAATGCATTTGGAAA
TGATCGGTGAAATCGCGTATGATTTAAAATTAGCTGGATTggattttaaa
tctttaaatttgatttctggtgaagatgaaattttctcttttaaacGTGC
TATAAGTCGTTTAAATGAAatgcaaagtgaattttatcaGTCCACTGAAT
ATCGTAAACAGTTATTTGTGCCGTACATTGGTACGGAAGCCGAGAAAATG
AACGCGGAAGAGAAACGACGCACGCGCGAGAAAATGAGGCTTCAGAAACA
GGCTAAAGAGCAGGACGCACAAAACGAAACTCAGACTGAAGAAGATTGGT
CTATTCCTAATCGAGACTATAAAGAAACAGACTGGGGAGACGAGGAGACC
CACCGCCGGACAAAAGACGCTGAAAGGTCCATggaacgttatatggacgt
ccTGAATGTTGAATGGACGTGGTTTGGATGTTTTGGGACGACTGGACAGG
AAAAGGAAAACCATGGAAATCTGATTGTGAAAAATGGACATTTTCTTTTA
ATCTTCATAAACAATAACGACACAAACAGCTTAAAAACAAGACGAAATGA
AAGCTATCATTTTGCTGGTATTACTTGGTTTATTCAAACTACACGCTGCA
GAGGTACTGGATGCTGAATGATGTCTGCTAGACAATTTCTTGTTCGCCAA
TGTCTGGCTAGAGTACACCAATGTCGATACACCAGCTCAACAACATCCAG
TACTCCAATTAAAAGATACAGTAGCATGTTAGAACTTGGTGTCATGAAAA
CAGACCAATCACAATTTGCTGCAATGCTTCAACTTCAGAAACTCTTCAAT
AACATCAAGAGTTATAACCCTGATCAATTAAgtaaagACTCCAACCAACC
AAGGGGACTTTATTTACACGGTGGTGTGGGTACAGGCAAGACAATGCTTC
TAGACATCTTTTATGATAATGTCCCTACAGAAAAGAAGAAGAGGGTACAT
TTTAATGCCTTTATGTTGTACCTGTACTCAGAAATTAACCGTTGGAATCT
TTGTTGTGATGAGAATGTAGACCATACTTCACCGGTTGAACACATTGCAA
ATAAGATTATGCAGGATACTTGGCTTCTTTGCTTTGACGAGATCCAAATC
AGTGATTATGCATCGTTCACATTATTGGAAGGAGTTCTTGGATACATGAT
ATCTCAAGGTGCTGTCATTGTTGGTACTTCCAACAGGTCACCAGAGGAGT
TGAGTAACTCTTCCATATCTGGTGAAAATGATGAAGTGGAAGTTAAGAAA
CCATCCTCGTTCTACAGTCTGTTTGCTGAGAATTGTGATATTCATCATGT
GGAATCTGAGCGTGATCACCGTATGGAGATGCATGAAGGAGAATGTAGAT
TCTTGTATCCAGTCGCACCTGAGAATAAGAAACAACTTGATATGATGTTT
GCAAAACTTATTGAACCCGGACAACGGATTTCATCCGAATTCTTAGAGAT
TTATAATAGAAAGATCCTCATTCCAGTTGCTTGTGGTGAAGTTGCCAGAT
TCCATTTTAAAGAGTTATTCATGCGACCGTATGGTCCTGCTGATTATATT
AAGATATGCAATGAATATAGTCATATCTTTATTGATGAGATTCCACGTAT
GACTATTAACCAGAAGAACGAGGCGAGACGTCTGTTGACTTTTATCGATG
CCGCTTATGAAACTAGAGCTAAGATTTATTGCACTGCTGAGTCAACAGCT
GAGGATTTATTCATGATGCTTCCCAGAAATGATGAGAACTATGAGGTAGA
ACAAATGCATTTGGAAATGATCGGTGAAATCGCGTATGATTTAAAATTAG
CTGGATTggattttaaatctttaaatttgatttctggtgaagatgaaatt
ttctcttttaaacGTGCTATAAGTCGTTTAAATGAAatgcaaagtgaatt
ttatcaGTCCACTGAATATCGTAAACAGTTATTTGTGCCGTACATTGGTA
CGGAAGCCGAGAAAATGAACGCGGAAGAGAAACGACGCACGCGCGAGAAA
ATGAGGCTTCAGAAACAGGCTAAAGAGCAGGACGCACAAAACGAAACTCA
GACTGAAGAAGATTGGTCTATTCCTAATCGAGACTATAAAGAAACAGACT
GGGGAGACGAGGAGACCCACCGCCGGACAAAAGACGCTGAAAGGTCCATg
gaacgttatatggacgtccTGAATGTTGAATGGACGTGGTTTGGATGTTT
TGGGACGACTGGACAGGAAAAGGAAAACCATGGAAATCTGATTGTGAAAA
ATGGACATTTTCTTTTAATCTTCATAAACAATAACGACACAAACAGCTTA
AAAACAAGACGAAATGAAAGCTATCATTTTGCTGGTATTACTTGGTTTAT
TCAAACTACACGCTGCAGAGGTACTGGATGCTGAATGATGTCTGCTAGAC
AATTTCTTGTTCGCCAATGTCTGGCTAGAGTACACCAATGTCGATACACC
AGCTCAACAACATCCAGTACTCCAATTAAAAGATACAGTAGCATGTTAGA
ACTTGGTGTCATGAAAACAGACCAATCACAATTTGCTGCAATGCTTCAAC
TTCAGAAACTCTTCAATAACATCAAGAGTTATAACCCTGATCAATTAAgt
aaagACTCCAACCAACCAAGGGGACTTTATTTACACGGTGGTGTGGGTAC
AGGCAAGACAATGCTTCTAGACATCTTTTATGATAATGTCCCTACAGAAA
AGAAGAAGAGGGTACATTTTAATGCCTTTATGTTGTACCTGTACTCAGAA
ATTAACCGTTGGAATCTTTGTTGTGATGAGAATGTAGACCATACTTCACC
GGTTGAACACATTGCAAATAAGATTATGCAGGATACTTGGCTTCTTTGCT
TTGACGAGATCCAAATCAGTGATTATGCATCGTTCACATTATTGGAAGGA
GTTCTTGGATACATGATATCTCAAGGTGCTGTCATTGTTGGTACTTCCAA
CAGGTCACCAGAGGAGTTGAGTAACTCTTCCATATCTGGTGAAAATGATG
AAGTGGAAGTTAAGAAACCATCCTCGTTCTACAGTCTGTTTGCTGAGAAT
TGTGATATTCATCATGTGGAATCTGAGCGTGATCACCGTATGGAGATGCA
TGAAGGAGAATGTAGATTCTTGTATCCAGTCGCACCTGAGAATAAGAAAC
AACTTGATATGATGTTTGCAAAACTTATTGAACCCGGACAACGGATTTCA
TCCGAATTCTTAGAGATTTATAATAGAAAGATCCTCATTCCAGTTGCTTG
TGGTGAAGTTGCCAGATTCCATTTTAAAGAGTTATTCATGCGACCGTATG
GTCCTGCTGATTATATTAAGATATGCAATGAATATAGTCATATCTTTATT
GATGAGATTCCACGTATGACTATTAACCAGAAGAACGAGGCGAGACGTCT
GTTGACTTTTATCGATGCCGCTTATGAAACTAGAGCTAAGATTTATTGCA
CTGCTGAGTCAACAGCTGAGGATTTATTCATGATGCTTCCCAGAAATGAT
GAGAACTATGAGGTAGAACAAATGCATTTGGAAATGATCGGTGAAATCGC
GTATGATTTAAAATTAGCTGGATTggattttaaatctttaaatttgattt
ctggtgaagatgaaattttctcttttaaacGTGCTATAAGTCGTTTAAAT
GAAatgcaaagtgaattttatcaGTCCACTGAATATCGTAAACAGTTATT
TGTGCCGTACATTGGTACGGAAGCCGAGAAAATGAACGCGGAAGAGAAAC
GACGCACGCGCGAGAAAATGAGGCTTCAGAAACAGGCTAAAGAGCAGGAC
GCACAAAACGAAACTCAGACTGAAGAAGATTGGTCTATTCCTAATCGAGA
CTATAAAGAAACAGACTGGGGAGACGAGGAGACCCACCGCCGGACAAAAG
ACGCTGAAAGGTCCATggaacgttatatggacgtccTGAATGTTGAATGG
ACGTGGTTTGGATGTTTTGGGACGACTGGACAGGAAAAGGAAAACCATGG
AAATCTGATTGTGAAAAATGGACATTTTCTTTTAATCTTCATAAACAATA
ACGACACAAACAGCTTAAAAACAAGACGAAATGAAAGCTATCATTTTGCT
GGTATTACTTGGTTTATTCAAACTACACGCTGCAGAGGTACTGGATGCTG
AATGATGTCTGCTAGACAATTTCTTGTTCGCCAATGTCTGGCTAGAGTAC
ACCAATGTCGATACACCAGCTCAACAACATCCAGTACTCCAATTAAAAGA
TACAGTAGCATGTTAGAACTTGGTGTCATGAAAACAGACCAATCACAATT
TGCTGCAATGCTTCAACTTCAGAAACTCTTCAATAACATCAAGAGTTATA
ACCCTGATCAATTAAgtaaagACTCCAACCAACCAAGGGGACTTTATTTA
CACGGTGGTGTGGGTACAGGCAAGACAATGCTTCTAGACATCTTTTATGA
TAATGTCCCTACAGAAAAGAAGAAGAGGGTACATTTTAATGCCTTTATGT
TGTACCTGTACTCAGAAATTAACCGTTGGAATCTTTGTTGTGATGAGAAT
GTAGACCATACTTCACCGGTTGAACACATTGCAAATAAGATTATGCAGGA
TACTTGGCTTCTTTGCTTTGACGAGATCCAAATCAGTGATTATGCATCGT
TCACATTATTGGAAGGAGTTCTTGGATACATGATATCTCAAGGTGCTGTC
ATTGTTGGTACTTCCAACAGGTCACCAGAGGAGTTGAGTAACTCTTCCAT
ATCTGGTGAAAATGATGAAGTGGAAGTTAAGAAACCATCCTCGTTCTACA
GTCTGTTTGCTGAGAATTGTGATATTCATCATGTGGAATCTGAGCGTGAT
CACCGTATGGAGATGCATGAAGGAGAATGTAGATTCTTGTATCCAGTCGC
ACCTGAGAATAAGAAACAACTTGATATGATGTTTGCAAAACTTATTGAAC
CCGGACAACGGATTTCATCCGAATTCTTAGAGATTTATAATAGAAAGATC
CTCATTCCAGTTGCTTGTGGTGAAGTTGCCAGATTCCATTTTAAAGAGTT
ATTCATGCGACCGTATGGTCCTGCTGATTATATTAAGATATGCAATGAAT
ATAGTCATATCTTTATTGATGAGATTCCACGTATGACTATTAACCAGAAG
AACGAGGCGAGACGTCTGTTGACTTTTATCGATGCCGCTTATGAAACTAG
AGCTAAGATTTATTGCACTGCTGAGTCAACAGCTGAGGATTTATTCATGA
TGCTTCCCAGAAATGATGAGAACTATGAGGTAGAACAAATGCATTTGGAA
ATGATCGGTGAAATCGCGTATGATTTAAAATTAGCTGGATTggattttaa
atctttaaatttgatttctggtgaagatgaaattttctcttttaaacGTG
CTATAAGTCGTTTAAATGAAatgcaaagtgaattttatcaGTCCACTGAA
TATCGTAAACAGTTATTTGTGCCGTACATTGGTACGGAAGCCGAGAAAAT
GAACGCGGAAGAGAAACGACGCACGCGCGAGAAAATGAGGCTTCAGAAAC
AGGCTAAAGAGCAGGACGCACAAAACGAAACTCAGACTGAAGAAGATTGG
TCTATTCCTAATCGAGACTATAAAGAAACAGACTGGGGAGACGAGGAGAC
CCACCGCCGGACAAAAGACGCTGAAAGGTCCATggaacgttatatggacg
tccTGAATGTTGAATGGACGTGGTTTGGATGTTTTGGGACGACTGGACAG
GAAAAGGAAAACCATGGAAATCTGATTGTGAAAAATGGACATTTTCTTTT
AATCTTCATAAACAATAACGACACAAACAGCTTAAAAACAAGACGAAATG
AAAGCTATCATTTTGCTGGTATTACTTGGTTTATTCAAACTACACGCTGC
AGAGGTACTGGATGCTGAATGATGTCTGCTAGACAATTTCTTGTTCGCCA
ATGTCTGGCTAGAGTACACCAATGTCGATACACCAGCTCAACAACATCCA
GTACTCCAATTAAAAGATACAGTAGCATGTTAGAACTTGGTGTCATGAAA
ACAGACCAATCACAATTTGCTGCAATGCTTCAACTTCAGAAACTCTTCAA
TAACATCAAGAGTTATAACCCTGATCAATTAAgtaaagACTCCAACCAAC
CAAGGGGACTTTATTTACACGGTGGTGTGGGTACAGGCAAGACAATGCTT
CTAGACATCTTTTATGATAATGTCCCTACAGAAAAGAAGAAGAGGGTACA
TTTTAATGCCTTTATGTTGTACCTGTACTCAGAAATTAACCGTTGGAATC
TTTGTTGTGATGAGAATGTAGACCATACTTCACCGGTTGAACACATTGCA
AATAAGATTATGCAGGATACTTGGCTTCTTTGCTTTGACGAGATCCAAAT
CAGTGATTATGCATCGTTCACATTATTGGAAGGAGTTCTTGGATACATGA
TATCTCAAGGTGCTGTCATTGTTGGTACTTCCAACAGGTCACCAGAGGAG
TTGAGTAACTCTTCCATATCTGGTGAAAATGATGAAGTGGAAGTTAAGAA
ACCATCCTCGTTCTACAGTCTGTTTGCTGAGAATTGTGATATTCATCATG
TGGAATCTGAGCGTGATCACCGTATGGAGATGCATGAAGGAGAATGTAGA
TTCTTGTATCCAGTCGCACCTGAGAATAAGAAACAACTTGATATGATGTT
TGCAAAACTTATTGAACCCGGACAACGGATTTCATCCGAATTCTTAGAGA
TTTATAATAGAAAGATCCTCATTCCAGTTGCTTGTGGTGAAGTTGCCAGA
TTCCATTTTAAAGAGTTATTCATGCGACCGTATGGTCCTGCTGATTATAT
TAAGATATGCAATGAATATAGTCATATCTTTATTGATGAGATTCCACGTA
TGACTATTAACCAGAAGAACGAGGCGAGACGTCTGTTGACTTTTATCGAT
GCCGCTTATGAAACTAGAGCTAAGATTTATTGCACTGCTGAGTCAACAGC
TGAGGATTTATTCATGATGCTTCCCAGAAATGATGAGAACTATGAGGTAG
AACAAATGCATTTGGAAATGATCGGTGAAATCGCGTATGATTTAAAATTA
GCTGGATTggattttaaatctttaaatttgatttctggtgaagatgaaat
tttctcttttaaacGTGCTATAAGTCGTTTAAATGAAatgcaaagtgaat
tttatcaGTCCACTGAATATCGTAAACAGTTATTTGTGCCGTACATTGGT
ACGGAAGCCGAGAAAATGAACGCGGAAGAGAAACGACGCACGCGCGAGAA
AATGAGGCTTCAGAAACAGGCTAAAGAGCAGGACGCACAAAACGAAACTC
AGACTGAAGAAGATTGGTCTATTCCTAATCGAGACTATAAAGAAACAGAC
TGGGGAGACGAGGAGACCCACCGCCGGACAAAAGACGCTGAAAGGTCCAT
ggaacgttatatggacgtccTGAATGTTGAATGGACGTGGTTTGGATGTT
TTGGGACGACTGGACAGGAAAAGGAAAACCATGGAAATCTGATTGTGAAA
AATGGACATTTTCTTTTAATCTTCATAAACAATAACGACACAAACAGCTT
AAAAACAAGACGAAATGAAAGCTATCATTTTGCTGGTATTACTTGGTTTA
TTCAAACTACACGCTGCAGAGGTACTGGATGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011535XLOC_011535Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020544-exon-sc0000358-1491911889:27643..27918TCONS_00020544-exon-sc0000358-1491911889:27643..27918Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:27643..27918TCONS_00020544-exon-sc0000358-1510915933:27643..27918Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:27643..27918TCONS_00020544-exon-sc0000358-1575043694:27643..27918Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1491911889:28207..28433TCONS_00020544-exon-sc0000358-1491911889:28207..28433Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:28207..28433TCONS_00020544-exon-sc0000358-1510915933:28207..28433Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:28207..28433TCONS_00020544-exon-sc0000358-1575043694:28207..28433Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1491911889:28712..29758TCONS_00020544-exon-sc0000358-1491911889:28712..29758Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:28712..29758TCONS_00020544-exon-sc0000358-1510915933:28712..29758Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:28712..29758TCONS_00020544-exon-sc0000358-1575043694:28712..29758Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1491911889:31904..32088TCONS_00020544-exon-sc0000358-1491911889:31904..32088Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:31904..32088TCONS_00020544-exon-sc0000358-1510915933:31904..32088Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:31904..32088TCONS_00020544-exon-sc0000358-1575043694:31904..32088Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1491911889:32404..32505TCONS_00020544-exon-sc0000358-1491911889:32404..32505Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:32404..32505TCONS_00020544-exon-sc0000358-1510915933:32404..32505Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:32404..32505TCONS_00020544-exon-sc0000358-1575043694:32404..32505Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1491911889:33659..34414TCONS_00020544-exon-sc0000358-1491911889:33659..34414Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:33659..34414TCONS_00020544-exon-sc0000358-1510915933:33659..34414Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:33659..34414TCONS_00020544-exon-sc0000358-1575043694:33659..34414Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1491911889:34747..34960TCONS_00020544-exon-sc0000358-1491911889:34747..34960Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:34747..34960TCONS_00020544-exon-sc0000358-1510915933:34747..34960Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:34747..34960TCONS_00020544-exon-sc0000358-1575043694:34747..34960Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1491911889:35098..35330TCONS_00020544-exon-sc0000358-1491911889:35098..35330Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1510915933:35098..35330TCONS_00020544-exon-sc0000358-1510915933:35098..35330Clytia hemisphaericaexon
TCONS_00020544-exon-sc0000358-1575043694:35098..35330TCONS_00020544-exon-sc0000358-1575043694:35098..35330Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020544-proteinTCONS_00020544-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000358supercontigsc0000358:27643..35330 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.0023	35.2719	10.0176	6.37181	12.8208	9.57522	14.0977	15.7774	15.2578	14.3718	14.9009	13.4825	16.9234	23.3422	16.7169	21.4329	22.2491	25.6032	7.97968	8.96352	37.9912	36.5983	33.0339	32.4483	22.8195	22.2152	14.4859	12.9997	20.1547	20.081
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005654ATPase_AFG1-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
Blast
[Close]
BLAST of TCONS_00020544 vs. Swiss-Prot (Human)
Match: AFG1L (AFG1-like ATPase OS=Homo sapiens GN=AFG1L PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 9.192e-62
Identity = 132/413 (31.96%), Postives = 220/413 (53.27%), Query Frame = 3 
Query:  144 PIKRYSSMLELGVMKTDQSQFAAMLQLQKLFNNIKSYNPD------QLSKDSNQPRGLYLHGGVGTGKTMLLDIFYDNVPTEKKKRVHFNAFMLYLYSEINRWNLCCDEN-----VDHTSPVEHIANKIMQDTWLLCFDEIQISDYASFTLLEGVLGYMISQGAVIVGTSNRSPEELSNSSISGENDEVEVKKPSSFYSLFAENCDIHHVESERDHRMEMHEGECRFLYPVAPEN-KKQLDMMFAKLIEPGQRIS-SEFLEIYNRKILIPVACGEVARFHFKELFMRPYGPADYIKICNEYSHIFIDEIPRMTINQKNEARRLLTFIDAAYETRAKIYCTAESTAEDLFMMLPRNDENYEVEQMHLEMIGEIAYDLKLAGLDFKSLNLISGEDEIFSFKRAISRLNEMQSEFY 1343
            P+  Y  +++   +K D+ Q   +  LQKL  ++K YN +      +L   S  PRGLY++G VGTGKTM++D+FY  V  ++KKRVHF+ FML ++  I+R      +           P+  IA +I ++  LLCFDE Q++D A   +L+ +   +   G V+V TSNR PE+L  + +   N          F ++  E C+   ++S  D+R        +  Y  +  + +  +D +F +L +    ++    L++  R++ +  ACG VA   F+EL  RP G +DY+++   +  IF+  IP+ T+  + + RR +T ID  Y+ + +I C+A +    LF+       + E+EQ  + M      DL L+    + L++ +GE+EIF+F+R ISRL EMQ+E Y
Sbjct:   75 PLDHYDFLIKAHELKDDEHQRRVIQCLQKLHEDLKGYNIEAEGLFSKLFSRSKPPRGLYVYGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHKRIHRLKQSLPKRKPGFMAKSYDPIAPIAEEISEEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANF-------VPFIAVLKEYCNTVQLDSGIDYRKRELPAAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTIFLRNIPQFTLANRTQGRRFITLIDNFYDLKVRIICSASTPISSLFL---HQHHDSELEQSRILMD-----DLGLSQDSAEGLSMFTGEEEIFAFQRTISRLTEMQTEQY 472
The following BLAST results are available for this feature:
BLAST of TCONS_00020544 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AFG1L9.192e-6231.96AFG1-like ATPase OS=Homo sapiens GN=AFG1L PE=1 SV=... [more]
back to top