XLOC_011535 (gene) - C. hemisphaerica

Overview
NameXLOC_011535
Unique NameXLOC_011535
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000358:27643..35330+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011535 ID=XLOC_011535|Name=XLOC_011535|organism=Clytia hemisphaerica|type=gene|length=7688bp|location=Sequence derived from alignment at sc0000358:27643..35330+ (Clytia hemisphaerica)
TAGTTATATAAAAATGGGTCACAAATTAACAAGTTGATAAAGATTTGAGG GATAAAATGATGTCTGCTAGACAATTTCTTGTTCGCCAATGTCTGGCTAG AGTACACCAATGTCGATACACCAGCTCAACAACATCCAGTACTCCAATTA AAAGATACAGTAGCATGTTAGAACTTGGTGTCATGAAAACAGACCAATCA CAATTTGCTGCAATGCTTCAACTTCAGAAACTCTTCAATAACATCAAGAG TTATAACCCTGATCAATTAAgtaaaggtaatttttttgaaaacatttgtt ATAAAAGATCTCAAAGAATGAATACGTAATCCCTGTCAACCACACACAAA TAAGTTATTTTCTAACCAAGCACAGATCACCAGTCTtagaacaaaaattt gaatttcaagGTTAATTTATTTTAGGATCCAAGTTTTTCTGATACTTAGG TCACACACTCGAATGAAATGATCCATACATACCtacttttttacttaaaa aaaataaagttgaaaGCAAAAAATATCTGAGGCTCCTAATATATTCATTG TATATCTATTTCAGACTCCAACCAACCAAGGGGACTTTATTTACACGGTG GTGTGGGTACAGGCAAGACAATGCTTCTAGACATCTTTTATGATAATGTC CCTACAGAAAAGAAGAAGAGGGTACATTTTAATGCCTTTATGTTGTACCT GTACTCAGAAATTAACCGTTGGAATCTTTGTTGTGATGAGAATGTAGACC ATACTTCACCGGTTGAACACATTGCAAATAAGATTATGCAGGTGAGTGTG ANGAATGTAGACCATACTTCACCAGTTGAACACATTGCAAATAAGATTAT GCAGGTGAGTGTGATGATTTCTGCACCGTGTGAGcacaaattttaagaaa tcCATTTGTTAATTTTGCTTTGCCAGCATTAGATGCGCCCTGTTCACTTC AAGTACTGCAAAGCAAATGGTgtgtttttctctaaaatttatCATGCTGT TTCACTTGGTAGAGAACTCTTAAAGCAACACTTAAGCTTCAACTTTTATG ATTAATAATTTCATTACAGGATACTTGGCTTCTTTGCTTTGACGAGATCC AAATCAGTGATTATGCATCGTTCACATTATTGGAAGGAGTTCTTGGATAC ATGATATCTCAAGGTGCTGTCATTGTTGGTACTTCCAACAGGTCACCAGA GGAGTTGAGTAACTCTTCCATATCTGGTGAAAATGATGAAGTGGAAGTTA AGAAACCATCCTCGTTCTACAGTCTGTTTGCTGAGAATTGTGATATTCAT CATGTGGAATCTGAGCGTGATCACCGTATGGAGATGCATGAAGGAGAATG TAGATTCTTGTATCCAGTCGCACCTGAGAATAAGAAACAACTTGATATGA TGTTTGCAAAACTTATTGAACCCGGACAACGGATTTCATCCGAATTCTTA GAGATTTATAATAGAAAGATCCTCATTCCAGTTGCTTGTGGTGAAGTTGC CAGATTCCATTTTAAAGAGTTATTCATGCGACCGTATGGTCCTGCTGATT ATATTAAGATATGCAATGAATATAGTCATATCTTTATTGATGAGATTCCA CGTATGACTATTAACCAGAAGAACGAGGCGAGACGTCTGTTGACTTTTAT CGATGCCGCTTATGAAACTAGAGCTAAGATTTATTGCACTGCTGAGTCAA CAGCTGAGGATTTATTCATGATGCTTCCCAGAAATGATGAGAACTATGAG GTAGAACAAATGCATTTGGAAATGATCGGTGAAATCGCGTATGATTTAAA ATTAGCTGGATTggattttaaatctttaaatttgatttctggtgaagatg aaattttctcttttaaacGTGCTATAAGTCGTTTAAATGAAatgcaaagt gaattttatcaGTCCACTGAATATCGTAAACAGTTATTTGTGCCGTACAT TGGTACGGAAGCCGAGAAAATGAACGCGGAAGAGAAACGACGCACGCGCG AGAAAATGAGGCTTCAGAAACAGGCTAAAGAGCAGGACGCACAAAACGAA ACTCAGACTGAAGAAGATTGGTCTATTCCTAATCGAGACTATAAAGAAAC AGACTGGGGAGACGAGGCAAGTTACACTAGCCTGAGTCAGGAAGCAGCCG CTGTTCATTTGAAAAGACATGTGTCTGAACGGCAAAAAGATGCTCCGAAA TTTGGTGCACAACATTTTTGGGGGTTTGGATGGTGGGAACatgttaaaaa taaaatcaaaaagaaaaacgaaaccgaatgaaatttcattttcaaatatg aTGAAGTATGATTGTTtctaaaactttttcatttaaatgttttatttata acCCCCTGCTATTTTTTGAGACATAGTTATTATCTTAGATTGAATATTTT TAGCCTACGTGATAGTGATCGAAACATTGTAAATCATACTTCTTTGAAAA GTAATCgaatttatcaattttgaaaatgcAGTTAATTTAAGGTCTTTCTC AAGAGAAGTTGATTCACTAATagtatttcaaaacaaagtccttatacaag attattttttttcgaattattgGGGAACTCCATATGGAAATTAGTTATGT CCTAAAATTGAATAGGTTTTTTAAAACAGTGTCCTTCcgaaagaattttt taaaaaattgtttcatttttttgtttagctTCATGTTTTTGAAACATTAT CCTATTTTCGGAAGAAAGTGTTCATAACTATCATAGATTGTCATTAAGGT AATAGGGGGATCATTGATATAATTACTTCTAATGACTTTTATTATTTGTT TGTGGGAGGATTGTAACTGATACCTctttaaattgttttgatttaatgag GTAATTAAAAATGCTATTTGTTAAAAGAAACATTTTGGAGGCACTTAATA ACAACAAGAATACCCTTTCCTACTAGTACTGGATGGAACTCTGCTTCTAA ACCGTTTAAACAGCTTTCAGATTCGTAAATAATGATAGATAGAAACAttt aagaacttttaaaattttagaacTCAGAGAAGCTTAGAAACAAACGTTAT AATTCTTCCGCCTTTTGTTCATAACTTGTTTTCCATAAATAATAGTGATT ACAGGTTTTCTAAGTTTATGAACATGACAACATgctaacaaaatcaaaaa taaaaacatttttaatccTATACCATTCCAGCTTTTCCGCAGCACCCGTT TGTAAAGTTCGACCGCCCGGTATCGCATTATGATCATTCAAGAAGTAATT TGTACATTTGAAAAACTgttctttgtttttgatttcccaTAACACATTAT TTATATAATTCAGCATGTTTCTATTACTTTCTATATGATGTAAGATGAGT TTGACCAGAAATACGGACAGCAAAAGCCGCAGCTTAAAGTCCTGAAACAC GAGGCTTATAAGTTGTTTTTATGTGAATTAAGTTACCAACAATTTTGTAC CGCtctaaaaatttacaaaattaaaaagtctaTTTTGAATAGCTTCTAGG GCATTCCACAATAATTCTTACACTCGCAAGTTTCGTAATTTGTTAAAGCT GGTTTAATGTGTATGAgtattttaagagttttaaaatGTCTTAACGTTCC TTgtcattttgttgttgttaatCTAGCTTAACCTTTTGTGCGCgctcttt attttgaaaaagttgaaatttttctagtttgttttttaaaactCACTCAA ACTAATTTCTTCAACATCaatttactcttaggttccaaataaacagaggg gcctaattgccgggggatTGGAAATAGTACTTCTGAAAACACAAAAATGA GGtaaaatataggctaaaatcaggctatttagagcaaaatagggggcctt ctctttgacatctgaaaatattcttaagaatTTATAAACGGGGAAGGGGT CCTATTAAGGTCCGGGGgggatttttcgaaaaattaacaagcgagAAGGG GGAAACCTATAAGAGTAATAATACATTGAACCATTATGATGAATTTGTAG CAAAACATACTTAATtaaatttgtttcttttattcaGGACACTATTATTG ATTGATCTGTCAGCTATTGAATAATGGATAATTTTTCATAATAAACTTCA AGATCCTGACTCTATAACGGTGGTTACAGAAGGTACTCAAAATTAACGAT GGAGAGcttttcttttattattattccTTTTATGGAAATAATTGCTCTCC GTCATAAAGAGTTTTGAGTACTTTCTATAAACGACGTTGTTCTATACAAG GATACTTTCAGGAGACCCACCGCCGGACAAAAGACGCTGAAAGGTCCATg gaacgttatatggacgtccTGAATGTTGAATGGACGTGGTTTGGATGTTT TGGGACGACTGGACAGGAAAAGGAAAACCATGGAAATCTGATTGTGAAAA ATGGACATTTTCTTTTAATCTTCATAAACAATAACGACACAAACAGGTAA TTAAAATAATACAGAGGTACAAATCTATTCAATTTCTCTTAATCCCTTTT ATCCCTTTCTTTTGTTGATTATGATAAACTTCCATTACAAAAACATTCAT TTGTTACAAACgatgaaaatctttttgttcTATTGTTCTATTGTTTTCGC TCGTAATTACCAAACTTCATTTTCtccaaagaaaaacaacaaacattttc attcaaaacaGAGTGCaggaaatttaaaacaatgcAATTGTAAAACTCGA ACGCAGTATAAAATGTTAGCCCATCCCAATTATTGAGACATAGATTTTTT GTGGTTTTCAGCTTAAAAACAAGACGAAATGAAAGCTATCATTTTGCTGG TATTACTTGGTTTATTCAAACTACACGCTGCAGAGGTACTGGATGCTGAT GGGAATCCTTTAAGTAAGAttaattttaaaggttttgtttttaaataaga atgatatcgtttgcttactcatcaattttaatttacaagcttttggatat tgaattgacacggatgtggatttttttttgcttatatcagcataataggc agacactgtcctagTATGAAACATACGTCTGATATGAAGCGGGAACACCT TCAAGTTTCAGAATTATGGCTCGAAGTATATGGTCACTcgctttttaaac attttctcaTCACGCGACGTTAAAAAGCTATAAACCGTTGAGAAGATACA TCTTAAGAGAGTGatataaaagatttttgaacaaCGTGTGACGGCtattt tcggtcatttttggcCGTTTTAGCCCTACTTCATAGGACTGTAACTTTTT ATCGAagagaaatataaaaaactGAACACAGATATAAAATCAGCTAAGGT TTAAAATAATATTCTTAAAGTGTCATTTTCGAACCATCACTAGTagaaca aatttctttttttatttttttattctttatctttgttcttcatttttcag ttttttgaaattttgttaacattttggATTAGTTTTCTCGGAAATATTTT TCCGATGGCGTTTGATTTTAACCTAAAAGTACATTAAGTTATACAAACCA CAAAGAAGAACCGAAAGCAGCCGACGTTGCTACCTTTtattttccgatgt gttctgagtgtatgtttcagctagaaattttgatctgttctgattagagC TTCGTAAATCAATTAACTAGAAATTTTAACGTGTTTTGATGATACAGGGG TATATGAGGGTATATGATATCTAAGTAaccagaacacatcttttaaggag acaggggtaaAAAACCAAGacaaaattgatgtaatcttgttgcctagtaa ccctagagAGGTTCAGAATACATCTGCCATGGGAAAAAAATCCAACGTCT TAAAGTTAtctatagaaaaacaaaactttttgatttcagAACACGTTCAA ACATAAAATAATGATAACCTTACGAAGACAAAacaaaggtttcctagaaa tcagaacacatcattagtATGTGTATCCTCGAAGAAAAACTACCCATTTT TCTTGAGAGTCAAAGATATACATATATTAGCCTTTTTAACCATTTTCTTA CATTTACACATTTCAGGTGATGACGAAATCCGAGAGATTGGTAATGCTGT TCCAAGTCCATTTAACCTTCCATTCTCTAAAGAAATCAAAGCAAAAGATG TTGTTATCAAAGACCCACATGCTGTATCCCTCTCTGGATCATTAAGTGCA TTAGCTCCAACTTACCCACCTGAAGTGGATCACGATGAAGgcaacaataa atttatttctaaatttaaaattataagcCAAACTAAGAAGAGATCAAACT CAACAGTAACACGACCACCACATCTTCATCAAAAGGACTCAGACAAAATC GAACAAAAACGACTTCATCGTTTGAGAATCGCACGACGCAAACAACGACT TCACCGACTTAACAAACTTAGACATAATCGTAGAAAACGACCTCACCATA GAAGACCTCATAAGAAACCAACCAAAAAGCCAACTGAAAAACCGACTGAA AAACCAACCGAAAAACCGACCGAAAAACCAACTACAAAGAAGCCACATAG AAAACGACCTCACCATAGAAGACCTCACCATAAAAGACCTCATAAGAAAC CAACCAAAAAGCCAACTGAAAAACCAACTGAAAAACCGACCGAAAAACCA ACTACAAAGAAACCACATAGAAAACGACCTCACCACAAAAGACCTCATAA GAAACCGACCGAAAAACCGACCGAAAAACCGACCGAAAAGCCGACTGAAA AACCGACGGAAAAGCCACATGATCCTCACGACCACCACAAACCCGACAAT CCAAACTTTTGCCGTGATGCAGGTATGTTTATGCCATATTTTTCTGTTTA GATTAAAATTAAGACGGGAATTCCACTTCCACTCAATTAAGAAAGTGTTT CTGTACTTCGAACTCAAACTACGCGGctttcgtttgtttgaAAAATCTTA TAAATTATTCTCAAATCCCCTTTTGACTTATGGAGAAAGTTCTCAATTCT TTGAAGATTGAATAAGAAGCGATGTATTTCAATGTTTTAATTGTGCCACG CTGCTTGTTCAAAGTTTAAAGTGATACATCGACCATTTAACTGGCTAGTT AAATATTAGCTTcttgttttcctttttcaatataattttttcATATCTTA AAAGGTATCTCATGTGATAGATCATGTACCGGATGTGAACCAGCTGGATT CTGTATCATGCCCGAAAAAAACCACCACGCAATCAGATGCGTTTGTAACT TCGGATGGACTGGTAAAAATGCAGTGTTCATGAAACCCTCAGCTGATTCG AAACTCAATAATATTATTATTGCTGACGACTGTAGTGTTGCATGTCAAAA CACCAATGACCGAAAAGGGTAAGTTCCTAATTGCATAAATTTCTGCTCAT TTCTAACGAAAAACTTTCTTACAGATTTATTAACTACTCATTCGCTCGAT TCCACAATTTTACTATTCATTCTAAAATAATaatatcatatttttcaatt ttcagaacCAAATGCGCCAAAACGCAACACTGACAACACAAAAACAAATA CTTGCAGCTTTTGACTAGCCTGCAAAACTTGGGACATTTTATCATAGTAT gattttataaagactttgtaaAAGTTCTcgtcttttcaatttttttatat tctatATTTTTTTACATACTGAATTGAAGCATATAATACTGTATATTCGT AACgacgcaaaaaaataaaatatactcATCATCCCGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020544TCONS_00020544Clytia hemisphaericatranscript
TCONS_00020545TCONS_00020545Clytia hemisphaericatranscript
TCONS_00020546TCONS_00020546Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020544-proteinTCONS_00020544-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000358supercontigsc0000358:27643..35330 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.03 35.41 10.02 6.37 12.82 9.58 14.1 15.78 15.28 14.41 15.29 13.56 16.95 25.75 16.87 21.43 22.25 25.68 7.98 8.96 38.08 36.73 33.03 32.48 22.82 22.22 14.49 13.04 20.15 20.08