TCONS_00019651 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019651
Unique NameTCONS_00019651
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1484

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019651 ID=TCONS_00019651|Name=TCONS_00019651|organism=Clytia hemisphaerica|type=transcript|length=1484bp
GAAAAATGAAGTCTATATAAACAGACTCTAAACTCAGAAAATCAGAAGTT
TCGAGAAAAAACGATTAAGAACATAAGACTGGAACTACACCAGAGAAGTT
ACAGAAGTTACTCTTAAAGCGAGTGAAATGACGCCCAGAGTCTATAATGT
CTAGATCGGCTCACGgcagattcaatccgtcatttaAGTTACCAAGCATC
AAAACTTGGTTGCGTGGAGCCAACATTACTCCAAAGAAACAACACAAACA
TCAAAAAAAGGGCTTGGAAATGAATGATGAAATAAAAGGACGGGAAAATG
TGCAAATAGTCAATCAAGTTTATTCAGAAGAAAGTAAAGATACTCCTCAA
AGAAGCCTGGAAACTAGCGAAGTTGCTGATTCAAAAAGGCGGGAAAACCA
AAACCCACTGGATCCATTTTGGATTGAAGCTGGCAAAAATGGTAACCTTA
GCAATACAACAGATCAAGAATGcaaaatcttccaaaaatgtTTGAATCCA
TTATTACTCTTGATGAAAGTTTCCGGACTTTATTTTGATGATATTGGAAG
GTACAAGATATTCAATAGATTGAGCAAGATTTATTGTCTGGCAAATAATG
TGTTCATCATATTAATTTTCATCAGTACATGCGCAGatatcTATATGTCA
GACTCACTTGTTCAATATTACATGAGATCAGTAAACCTATTATGTGTGAT
GAAGTCAGCCATTCAAGTCACCATTACTATGCGATTGTGTCAGAAGAAAT
TCCTGTGGAAATTCATTGAGCAGTTAGAATCGTTCATCGTCGATATTATC
ATTGCAGATTGCCCAGATCAACAAGAAAAAGGTTTGGTTCTACCTTTAGC
GTTGTTTACAATCCTTTGCAATGCATTAACGTACACATTTAAAGGATTCT
ATGATGCATTGCAACATCACCAGGCAAGCAAAGGTTTATGCTGTAAGAAG
TTTATCAAAGGCATACGAACAAGTTACCTCAGACTGACCATTCTCTGTGA
AGATTTTGATGACATGTTTTCACTAATGCTGATGTTCTCTTACCTCATTG
ATGTTGTGTTGACTTGTTTGCAACTCAGGCTAATGTTATTCACCTACACT
GATATGATATCCAGGCTAATGATCGCcatttatcttttctttccaATCGT
TTCACTGTTATTTTTATCGGCATCAACATCACAGCTGTTTGAAGTGGGCC
AGAAGATTCGTTGCTTTGTTCAAGGTCTTCAAGTTGACGTCATCGATCTA
GACACTAAAGTGGAGTTGGATTTACTGCTCTTTCACATTGGATCAGACCC
TGTTGTCATGACAATATGGAAGATGATACCACTTAATCGATCTATTATCG
TTTCCATTTTCATCAGTATTGTGACGTATTTCACGATGCTACTTTCATTC
TTGTGATGCTGGTTTGCTTAATACTGTACTCAAATTTTGATATCACATTC
TTCGCTCGTTATtgagctcttccagaaaaaaatg
Run BLAST on NCBI

protein sequence of TCONS_00019651-protein

>TCONS_00019651-protein ID=TCONS_00019651-protein|Name=TCONS_00019651-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
MSRSAHGRFNPSFKLPSIKTWLRGANITPKKQHKHQKKGLEMNDEIKGRE
NVQIVNQVYSEESKDTPQRSLETSEVADSKRRENQNPLDPFWIEAGKNGN
LSNTTDQECKIFQKCLNPLLLLMKVSGLYFDDIGRYKIFNRLSKIYCLAN
NVFIILIFISTCADIYMSDSLVQYYMRSVNLLCVMKSAIQVTITMRLCQK
KFLWKFIEQLESFIVDIIIADCPDQQEKGLVLPLALFTILCNALTYTFKG
FYDALQHHQASKGLCCKKFIKGIRTSYLRLTILCEDFDDMFSLMLMFSYL
IDVVLTCLQLRLMLFTYTDMISRLMIAIYLFFPIVSLLFLSASTSQLFEV
GQKIRCFVQGLQVDVIDLDTKVELDLLLFHIGSDPVVMTIWKMIPLNRSI
IVSIFISIVTYFTMLLSFL
Run BLAST on NCBI

transcript from alignment at sc0000333:194525..204006+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019651 ID=TCONS_00019651|Name=TCONS_00019651|organism=Clytia hemisphaerica|type=transcript|length=9482bp|location=Sequence derived from alignment at sc0000333:194525..204006+ (Clytia hemisphaerica)
GAAAAATGAAGTCTATATAAACAGACTCTAAACTCAGAAAATCAGAAGTT TCGAGAAAAAACGATTAAGAACATAAGACTGGAACTACACCAGAGAAGTT ACAGAAGTTACTCTTAAAGCGAGTGAAATGACGCCCAGAGTCTATAATGT CTAGATCGGCTCACGgcagattcaatccgtcatttaAGTTACCAAGCATC AAAACTTGGTTGCGTGGAGCCAACATTACTCCAAAGAAACAACACAAACA TCAAAAAAAGGGCTTGGAAATGAATGATGAAATAAAAGGACGGGAAAATG TGCAAATAGTCAATCAAGTTTATTCAGAAGAAAGTAAAGATACTCCTCAA AGAAGCCTGGAAACTAGCGAAGTTGCTGATTCAAAAAGGCGGGAAAACCA AAACCCACTGGATCCATTTTGGATTGAAGCTGGCAAAAATGGTAACCTTA GCAATACAACAGATCAAGAATGcaaaatcttccaaaaatgtTTGAATCCA TTATTACTCTTGATGAAAGTTTCCGGACTTTATTTTGATGATATTGGAAG GTACAAGATATTCAATAGATTGAGCAAGATTTATTGTCTGGCAAATAATG TGTTCATCATATTAATTTTCATCAGTACATGCGCAGGTGAGACTAATCAA TTTTTCACATTAGACTCGGGCAAAGGCCTAAGCATTCGATTCTTTCGTTT ATATAATAGCAAtgaatttgcaatttttttcccgaaaaagGCAAAAGGTG TGCAGCACACTACAATCtccctcgaaatatattgagattttagtgtattt taacgtttttcagaatttaaagttcgggcgagaattgctattttagcact tccactttcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNgttaaaactctactttccaactgtagttta aggcgcttaaaaatcaattatggtgttcaaaattacaccgggaactcccc tttgtctcaaatatttcttgtaggATTGTAGAAGATCTCGAGAAAAACTT TCCAATGAAAATTAACTCTTGCAAAAATCAGTATATTTAAGGTATATTTC TGGCTTTTAACAAAAACTGTATTCAGAGCTGATGCATCATTCCTTTGGCC AATATGGATTAGTAAAATTTCCTACAATATTTCAAAGCACTCtgattttt tttagatatcTATATGTCAGACTCACTTGTTCAATATTACATGAGATCAG TAAACCTATTATGTGTGATGAAGTCAGCCATTCAAGTCACCATTACTATG CGATTGTGTCAGAAGAAATTCCTGTGGAAATTCATTGAGCAGTTAGAATC GTTCATCGTCGATATTATCATTGCAGATTGCCCAGATCAACAAGAAAAAG GTATGTGTTATATCTCTGATTTTTCACTAATGATTGGTGCCTGAGCACCA TGAAACTATGAGTTTGAAACAtagatattgtgtcaactcCTTATTATATC TCTGTTATATCAATGGcttgatttttgaaaaggttttgaaagtttaaatt CGACAACTTTCAGGCTTAGCATAATCTAAAACAATGCCTTTGTGTCACTT TTAGGAGGAATTGAGTTTGGAAATGCTTACTAATAATGTGTAGTGTCAAT CTGACTTCTGGAGTCTCAAATTTTCACAacaactaccttaagggaactta ttttggcgggaactaattttggcgagcggcgcaaatcttgaaaaaattta attttggtgggaactaattttggcgagtcaacgaaatttttaattttggc gggaactaattttggcgaatgacagcgtaaatctattttgccttattttg agcaattttgatgaatttcaagggtatatttaggcaaggaaaccaaaaaa tttaattttggcgggaacttattttggcgagtgagcaaaatatttaattt tggcgggaactaattttaatccgctaaaattagttcccgccaaaataagt tcccttaacgTATTGTAAATCGCGCGTTCGAGCCATAAGATAACTATTAC CCTTTGGGGGGTTAATTAGGCAAATGGGTGTCAGGAATGTACGAGCTATA AGCCATTAAGGGTACTCTCAATGTTTCTCACAGgggtaaaaaaacaacaa ccaTAAACCAGCAGTTGGCCCTCCGAACaatacaaaatttaaaatatcga aaattggaaaataggCCCTCGCAAGGGTGTAGGGAtgtaaaacgtcaaaa aagggGAACAATTTCGAAATTTAGTCTCTCACAAGATCGATTTTGGAACT CTGGTTCGGACAAAATCGTCCCCTACTAGTACCCTCCTAGCCCGGGATAT TATGCATTGATTAAATAAATATCTTCGGttataaattttttgtaaaaaat accTATGACTATGACTGTTAGACACTTTTAGTGGTTTTTCACTGTTTAAA TTTTAGGTCGCCAAATGATTCGAAAAAGTCGTTTCTTCTTGGCAAAACTC ATTATCACAATCCTGATATACGTTAGTGCTTTTATGACAATGATCTACAA ATACCCAGATAATTTCCTGTACAAAAGCTTGGAGAAGAATTACCTGCCAT CTCTATGTAAAATTTTGATCATGATCCCGTTCGTAACAGGTTTGGTTCTA CCTTTAGCGTTGTTTACAATCCTTTGCAATGCATTAACGTACACATTTAA AGGATTCTATGATGCATTGCAACATCACCAGGCAAGCAAAGGTTTATGCT GTAAGAAGTTTATCAAAGGCATACGAACAAGTTACCTCAGGTAAAAACTt acatatgtttttttttcggagAGAATTGAGTGGTATTATTATTAAAAAGT TTGTAAAACAACATTGGGCTGTTCAAGTAAATCGTCAAagagggtggacg aaccttttcaagacaaaaaaaaatcctGGAAACATGTGGATGCCCCCtgg aaaatgggaaaatttgcaaaagaaccattggaaaaatcattttcatatct taaagtgagggtgaacgaactaaaatcagtctttttatcccctgaaaaaa aaaaatactcctttaagaccccctggaaattctacTCAGATTACCCCCtg catggatataaaatggccCATTAAAACAACGTATAATAACGTATACGTAT ATAACTCATACTCATACTATATACAACATGTATAAACAATGCGttaggtc gtgggttcaatccccagccTGGTCATACCCAAGACTTCGTACTTAGtaca aaaaagtacaaaaagacgCCTCTCTGCTTGAAGCTCCGCAATTGAAGAGA ATGATCAAGAGTTAGAGGAGCAATgcgtcaaaaacttcaaaaaatcgaaa ttatgCGAGCCTCGATTAACGTAGTCTAGTATATTGAGATTAGCCTATAA GAAGATTCTACTATGGCCTTAATCCTTGACAAAAGGGGAtttctcaaaat cttaaaaCCAAAATGATTGGAAAGTGAAGCTTTAGCTCTGAGTTTTAAac gtcacagacccgctgggaccccagcccaactGCAAACTTTTATCCCTGTT GGGAAagataccctagaatttcagctccactgggaaattgactttgtttt tatcccaattcgaaattcaattaaaaaattacactccaaaaccatcccaa cgGATTTTTTGTACACTGAGtttcagaggttaagttttcaaagaatatac taacctctgaagaccaataatagaaattttatcgcgcatgtgtcaatcta atcactgtagaaaaatcaaagatgaagagcaaatattaccaTATTAATGT CTAGCAGGAGACGATATCAGTATACATGTTTACTATTGACGAATTCCCCA GCGAAACTTCCAAGTGTAAtcgaaatgagtttctttcaaaagaaatcttc tacatgattcccaaatgtataacagtaattactaaattATTAATTATGGT AATACTAATTCAATGGGATCGTAATAATAGAGAAATCTTGTGTtacgatt ctctatcactgactctttttaaaaagcgttgatgacatttctgagttGTA ATCAACGACGGGAATAGATATATCGACTATGaccctcatccaagatcttg gatgtcgtcatggttacttttctctgcgttgattgcgcgctgaatagaaa ctcgattggtcggcacaggtcaatatatgattttggccTGTGCTTTTCAA GGTAGATTTTTTGACCTGGGAACAATAAAATATCTATTcctattgggatt tcaatagaaatctTTATCACCGCTTGGGAACAggttccactggggctgtg aggcagggctgtttttaacattagacttaaaatTTAGGAACTTAAGATTT CAGGATCTAAAATGATCTAAAATGATCCAATAGATAAGGCTTAGAATATA TTCTAGTAAAGCCGATAAAACCCCCCTAAGAAAAACCCAATGACAAAAAG TAGAAGTGCTGAAATCACCATTCTCAcctgaacttgaaattttgatcaac gaaaaaatactcaaaaatgctATTTTATTTTGAGCAGTACAGTGGATCTC TTtatttcgaacctctataactcgaatgcctCCTTAGCTCGAACAAGTTT TGTGGTCCAAATGCATTATAAATcttactcgaaatttccttaaatcGAAA ATATTTCTGTTCCCCGTCCGAGTTCCAGTTATGGAGACTTCATCGTATTT TAGTTTCCTTCCCAAGTGGAGATTTGAGAAATATAATGCAGGAGTGCTTT CAATAGTGCTCGAATcttggtcgaaatatattgaaatttttagtgtattt aaaagtttttcagaatttagagTTTGGCTATTTTAGTACTTCCTCTTTAT TTCATTGAATATTCCAATTAAAAggtttgagcttttaaatcctgagactC TAACGTTTTActagtcttaagtctcatgttaaaattCAGACCTAAAACTG TATTTTTATTACTATTTTATTACAGACTGACCATTCTCTGTGAAGATTTT GATGACATGTTTTCACTAATGCTGATGTTCTCTTACCTCATTGATGTTGT GTTGACTTGTTTGCAACTCAGGCTAATGTTATTCACCTACACTGATATGA TATCCAGGCTAATGATCGCcatttatcttttctttccaATCGTTTCACTG TTATTTTTATCGGCATCAACATCACAGCTGTTTGAAGTGGTAGGTTTTTA CTGTACTGCAACCCAATATTATTTCGTACATCtgaaatgaatgaataaat aatGGAGTGGCGGCTTTATGTGAGCCGAAATAACGATTTTCTATCAAAAG gtgctattcatgatattcctgacataatgttttctacggaaagacccggt ttttgccagtagtggcaaattctatacaacttttgtctagtttaaatttg ccactactggttAAAACTGGGGTATTTCCGtaaaaaaacattacgtcatg aatatcatgaatcgtTTCTTGATCCTTTATTGTTAAATTCGAGGTATTTT GAATAACAGCTAGACGATAAATATTTCTTTAtcatttattttctatttcc cCCAATCTAACTTCACGTATTTGATCATAGTTcgtaaaaaaccccggtct gcaagccttttgtttctttccattgttccctacttgaacttgcgtttgag aaattagtttgttttgctcgctttttgatcatgtgattaaatcttaaacc aattcCAAGAGGAATAAATACTTGGTatcgtgatcaaaaactgagcaaat cgattttcatcttttgatattaacaaaggaaaaagctatcAAAAAGCTTT CAGACCAGAGTTTTTTTACGGACTatgatttgattgaaatttcaaCAATC CGATACCaaataatgatttttcaaaGTGAATTTAATAGAATATCTCACGC TTATAACAGGGCCAGAAGATTCGTTGCTTTGTTCAAGGTCTTCAAGTTGA CGTCATCGATCTAGACACTAAAGTGGAGGTAAAGTATTTTAGGCACacaa actttcgcaagcagaaagtttcgcgaggtcgaaaaatcgcgaaatttacg atATTTACTTTCGcggatttgaagaaaaaatgtttttcccgAGCATAAAT cgtttgaataaaaatgaaatttttcaaatgaaaattgccttaaaattgaa aacattCCTTAAATTCGATAAAGACGGTTGCTCTTCAACTTTAAAAGGCA TTAAAGGATAGAGTAGTAGTCAAAGATATCCTGCTTTTGCGGAACAAATG ATTTAATTACATGCAAGAAACCAGTTTAGTAACCAGAAGAACAACTATGA GAATCCCTTGAACTCCAACGGCCGttaaaaaattgttcaagaTCTAAAAA CTTCCACTAATATGTTTTTCGTTGCTTTTCAGTTGGATTTACTGCTCTTT CACATTGGATCAGACCCTGTTGTCATGACAATATGGAAGATGATACCACT TAATCGATCTATTATCGTTTCCGTAAGTTCTGTAAACACAATTTAGCGGG GTTTAGGGAAAGGTCCGACTCGGAGGGCTGCGAGTTCGAAATAGACCGGG GATAGGCCATGTAGTGAGGTCACCTCTAGGGTCGCCTTTTGACCAAGGTG GCGGTTCCAGGTCCCATAATAAGAGACAGATCATTGGaagaagaaataaa acaaaaaaatgttgcaaaaaaaaattactaaatggaatttcaaattcaat atcGAAAGTGATTTTTCTTCTTCGCGCTTTTGTGAAATTTCGGTTAGAAA CTAAGTAGGCTACTCTACTCACCTTTTATcaaaaagagtttcttatagga aaTATACCTATAATAGAGGTTTGCGATTCGGACTATGCAATAAGAAACAA ATTTATAAAGACTCAATACCGTATTCCGTTTGCTCGTTGTTGAACATTTC TGTATTTGAGTCTTTGAATCTTCATGATTGGTCCTCATAGCATTGCTTCT TTCTTTCTTAACTGAAAATACAAAAACGCATATAAAGTAAAGCTGTATTA TTTATAAATAAAAGGATGCTTTAAATTTTAGCTTatagaatttcaatttt attttttcgcaaCCGAAAAAACGGGACTCTCTTAAATGATACAAATTgcc attttaaaatgtttaaaaacgACAAACTCGAACCCAAGTCTCTTTAAATT CACCTTTTTCATGATTCTGATAGCCTTCACGAAATGTTTGCACCAGTAAA AGCAAGCGTAGCTCTTGGAGACGGGATTGACGAGATTGGAAAAACGGTCA ATAAAGTTCCTTATATTGGGATTCAAAAAAGTAGTTTAGTTGTCTggatt ttagtttttagttCATTAAAATAGCTGCCCCCCCACtgattaatttttcg aaaattttccacccaggacattcttattccaccccctcgctttttaagat tttttccaaccccctggcTATTAGTATACAGTATCTTACTACTTTTCTTT TAGATTTTCATCAGTATTGTGACGTATTTCACGATGCTACTTTCATTCTT GTGATGCTGGTTTGCTTAATACTGTACTCAAATTTTGATATCACATTCTT CGCTCGTTATtgagctcttccagaaaaaaatg

Coding sequence (CDS) from alignment at sc0000333:194525..204006+

>TCONS_00019651 ID=TCONS_00019651|Name=TCONS_00019651|organism=Clytia hemisphaerica|type=CDS|length=8820bp|location=Sequence derived from alignment at sc0000333:194525..204006+ (Clytia hemisphaerica)
ATGTCTAGATCGGCTCACGgcagattcaatccgtcatttaAGTTACCAAG
CATCAAAACTTGGTTGCGTGGAGCCAACATTACTCCAAAGAAACAACACA
AACATCAAAAAAAGGGCTTGGAAATGAATGATGAAATAAAAGGACGGGAA
AATGTGCAAATAGTCAATCAAGTTTATTCAGAAGAAAGTAAAGATACTCC
TCAAAGAAGCCTGGAAACTAGCGAAGTTGCTGATTCAAAAAGGCGGGAAA
ACCAAAACCCACTGGATCCATTTTGGATTGAAGCTGGCAAAAATGGTAAC
CTTAGCAATACAACAGATCAAGAATGcaaaatcttccaaaaatgtTTGAA
TCCATTATTACTCTTGATGAAAGTTTCCGGACTTTATTTTGATGATATTG
GAAGGTACAAGATATTCAATAGATTGAGCAAGATTTATTGTCTGGCAAAT
AATGTGTTCATCATATTAATTTTCATCAGTACATGCGCAGatatcTATAT
GTCAGACTCACTTGTTCAATATTACATGAGATCAGTAAACCTATTATGTG
TGATGAAGTCAGCCATTCAAGTCACCATTACTATGCGATTGTGTCAGAAG
AAATTCCTGTGGAAATTCATTGAGCAGTTAGAATCGTTCATCGTCGATAT
TATCATTGCAGATTGCCCAGATCAACAAGAAAAAGGTTTGGTTCTACCTT
TAGCGTTGTTTACAATCCTTTGCAATGCATTAACGTACACATTTAAAGGA
TTCTATGATGCATTGCAACATCACCAGGCAAGCAAAGGTTTATGCTGTAA
GAAGTTTATCAAAGGCATACGAACAAGTTACCTCAGACTGACCATTCTCT
GTGAAGATTTTGATGACATGTTTTCACTAATGCTGATGTTCTCTTACCTC
ATTGATGTTGTGTTGACTTGTTTGCAACTCAGGCTAATGTTATTCACCTA
CACTGATATGATATCCAGGCTAATGATCGCcatttatcttttctttccaA
TCGTTTCACTGTTATTTTTATCGGCATCAACATCACAGCTGTTTGAAGTG
GGCCAGAAGATTCGTTGCTTTGTTCAAGGTCTTCAAGTTGACGTCATCGA
TCTAGACACTAAAGTGGAGTTGGATTTACTGCTCTTTCACATTGGATCAG
ACCCTGTTGTCATGACAATATGGAAGATGATACCACTTAATCGATCTATT
ATCGTTTCCATTTTCATCAGTATTGTGACGTATTTCACGATGCTACTTTC
ATTCTTGTGAATGTCTAGATCGGCTCACGgcagattcaatccgtcattta
AGTTACCAAGCATCAAAACTTGGTTGCGTGGAGCCAACATTACTCCAAAG
AAACAACACAAACATCAAAAAAAGGGCTTGGAAATGAATGATGAAATAAA
AGGACGGGAAAATGTGCAAATAGTCAATCAAGTTTATTCAGAAGAAAGTA
AAGATACTCCTCAAAGAAGCCTGGAAACTAGCGAAGTTGCTGATTCAAAA
AGGCGGGAAAACCAAAACCCACTGGATCCATTTTGGATTGAAGCTGGCAA
AAATGGTAACCTTAGCAATACAACAGATCAAGAATGcaaaatcttccaaa
aatgtTTGAATCCATTATTACTCTTGATGAAAGTTTCCGGACTTTATTTT
GATGATATTGGAAGGTACAAGATATTCAATAGATTGAGCAAGATTTATTG
TCTGGCAAATAATGTGTTCATCATATTAATTTTCATCAGTACATGCGCAG
atatcTATATGTCAGACTCACTTGTTCAATATTACATGAGATCAGTAAAC
CTATTATGTGTGATGAAGTCAGCCATTCAAGTCACCATTACTATGCGATT
GTGTCAGAAGAAATTCCTGTGGAAATTCATTGAGCAGTTAGAATCGTTCA
TCGTCGATATTATCATTGCAGATTGCCCAGATCAACAAGAAAAAGGTTTG
GTTCTACCTTTAGCGTTGTTTACAATCCTTTGCAATGCATTAACGTACAC
ATTTAAAGGATTCTATGATGCATTGCAACATCACCAGGCAAGCAAAGGTT
TATGCTGTAAGAAGTTTATCAAAGGCATACGAACAAGTTACCTCAGACTG
ACCATTCTCTGTGAAGATTTTGATGACATGTTTTCACTAATGCTGATGTT
CTCTTACCTCATTGATGTTGTGTTGACTTGTTTGCAACTCAGGCTAATGT
TATTCACCTACACTGATATGATATCCAGGCTAATGATCGCcatttatctt
ttctttccaATCGTTTCACTGTTATTTTTATCGGCATCAACATCACAGCT
GTTTGAAGTGGGCCAGAAGATTCGTTGCTTTGTTCAAGGTCTTCAAGTTG
ACGTCATCGATCTAGACACTAAAGTGGAGTTGGATTTACTGCTCTTTCAC
ATTGGATCAGACCCTGTTGTCATGACAATATGGAAGATGATACCACTTAA
TCGATCTATTATCGTTTCCATTTTCATCAGTATTGTGACGTATTTCACGA
TGCTACTTTCATTCTTGTGAATGTCTAGATCGGCTCACGgcagattcaat
ccgtcatttaAGTTACCAAGCATCAAAACTTGGTTGCGTGGAGCCAACAT
TACTCCAAAGAAACAACACAAACATCAAAAAAAGGGCTTGGAAATGAATG
ATGAAATAAAAGGACGGGAAAATGTGCAAATAGTCAATCAAGTTTATTCA
GAAGAAAGTAAAGATACTCCTCAAAGAAGCCTGGAAACTAGCGAAGTTGC
TGATTCAAAAAGGCGGGAAAACCAAAACCCACTGGATCCATTTTGGATTG
AAGCTGGCAAAAATGGTAACCTTAGCAATACAACAGATCAAGAATGcaaa
atcttccaaaaatgtTTGAATCCATTATTACTCTTGATGAAAGTTTCCGG
ACTTTATTTTGATGATATTGGAAGGTACAAGATATTCAATAGATTGAGCA
AGATTTATTGTCTGGCAAATAATGTGTTCATCATATTAATTTTCATCAGT
ACATGCGCAGatatcTATATGTCAGACTCACTTGTTCAATATTACATGAG
ATCAGTAAACCTATTATGTGTGATGAAGTCAGCCATTCAAGTCACCATTA
CTATGCGATTGTGTCAGAAGAAATTCCTGTGGAAATTCATTGAGCAGTTA
GAATCGTTCATCGTCGATATTATCATTGCAGATTGCCCAGATCAACAAGA
AAAAGGTTTGGTTCTACCTTTAGCGTTGTTTACAATCCTTTGCAATGCAT
TAACGTACACATTTAAAGGATTCTATGATGCATTGCAACATCACCAGGCA
AGCAAAGGTTTATGCTGTAAGAAGTTTATCAAAGGCATACGAACAAGTTA
CCTCAGACTGACCATTCTCTGTGAAGATTTTGATGACATGTTTTCACTAA
TGCTGATGTTCTCTTACCTCATTGATGTTGTGTTGACTTGTTTGCAACTC
AGGCTAATGTTATTCACCTACACTGATATGATATCCAGGCTAATGATCGC
catttatcttttctttccaATCGTTTCACTGTTATTTTTATCGGCATCAA
CATCACAGCTGTTTGAAGTGGGCCAGAAGATTCGTTGCTTTGTTCAAGGT
CTTCAAGTTGACGTCATCGATCTAGACACTAAAGTGGAGTTGGATTTACT
GCTCTTTCACATTGGATCAGACCCTGTTGTCATGACAATATGGAAGATGA
TACCACTTAATCGATCTATTATCGTTTCCATTTTCATCAGTATTGTGACG
TATTTCACGATGCTACTTTCATTCTTGTGAATGTCTAGATCGGCTCACGg
cagattcaatccgtcatttaAGTTACCAAGCATCAAAACTTGGTTGCGTG
GAGCCAACATTACTCCAAAGAAACAACACAAACATCAAAAAAAGGGCTTG
GAAATGAATGATGAAATAAAAGGACGGGAAAATGTGCAAATAGTCAATCA
AGTTTATTCAGAAGAAAGTAAAGATACTCCTCAAAGAAGCCTGGAAACTA
GCGAAGTTGCTGATTCAAAAAGGCGGGAAAACCAAAACCCACTGGATCCA
TTTTGGATTGAAGCTGGCAAAAATGGTAACCTTAGCAATACAACAGATCA
AGAATGcaaaatcttccaaaaatgtTTGAATCCATTATTACTCTTGATGA
AAGTTTCCGGACTTTATTTTGATGATATTGGAAGGTACAAGATATTCAAT
AGATTGAGCAAGATTTATTGTCTGGCAAATAATGTGTTCATCATATTAAT
TTTCATCAGTACATGCGCAGatatcTATATGTCAGACTCACTTGTTCAAT
ATTACATGAGATCAGTAAACCTATTATGTGTGATGAAGTCAGCCATTCAA
GTCACCATTACTATGCGATTGTGTCAGAAGAAATTCCTGTGGAAATTCAT
TGAGCAGTTAGAATCGTTCATCGTCGATATTATCATTGCAGATTGCCCAG
ATCAACAAGAAAAAGGTTTGGTTCTACCTTTAGCGTTGTTTACAATCCTT
TGCAATGCATTAACGTACACATTTAAAGGATTCTATGATGCATTGCAACA
TCACCAGGCAAGCAAAGGTTTATGCTGTAAGAAGTTTATCAAAGGCATAC
GAACAAGTTACCTCAGACTGACCATTCTCTGTGAAGATTTTGATGACATG
TTTTCACTAATGCTGATGTTCTCTTACCTCATTGATGTTGTGTTGACTTG
TTTGCAACTCAGGCTAATGTTATTCACCTACACTGATATGATATCCAGGC
TAATGATCGCcatttatcttttctttccaATCGTTTCACTGTTATTTTTA
TCGGCATCAACATCACAGCTGTTTGAAGTGGGCCAGAAGATTCGTTGCTT
TGTTCAAGGTCTTCAAGTTGACGTCATCGATCTAGACACTAAAGTGGAGT
TGGATTTACTGCTCTTTCACATTGGATCAGACCCTGTTGTCATGACAATA
TGGAAGATGATACCACTTAATCGATCTATTATCGTTTCCATTTTCATCAG
TATTGTGACGTATTTCACGATGCTACTTTCATTCTTGTGAATGTCTAGAT
CGGCTCACGgcagattcaatccgtcatttaAGTTACCAAGCATCAAAACT
TGGTTGCGTGGAGCCAACATTACTCCAAAGAAACAACACAAACATCAAAA
AAAGGGCTTGGAAATGAATGATGAAATAAAAGGACGGGAAAATGTGCAAA
TAGTCAATCAAGTTTATTCAGAAGAAAGTAAAGATACTCCTCAAAGAAGC
CTGGAAACTAGCGAAGTTGCTGATTCAAAAAGGCGGGAAAACCAAAACCC
ACTGGATCCATTTTGGATTGAAGCTGGCAAAAATGGTAACCTTAGCAATA
CAACAGATCAAGAATGcaaaatcttccaaaaatgtTTGAATCCATTATTA
CTCTTGATGAAAGTTTCCGGACTTTATTTTGATGATATTGGAAGGTACAA
GATATTCAATAGATTGAGCAAGATTTATTGTCTGGCAAATAATGTGTTCA
TCATATTAATTTTCATCAGTACATGCGCAGatatcTATATGTCAGACTCA
CTTGTTCAATATTACATGAGATCAGTAAACCTATTATGTGTGATGAAGTC
AGCCATTCAAGTCACCATTACTATGCGATTGTGTCAGAAGAAATTCCTGT
GGAAATTCATTGAGCAGTTAGAATCGTTCATCGTCGATATTATCATTGCA
GATTGCCCAGATCAACAAGAAAAAGGTTTGGTTCTACCTTTAGCGTTGTT
TACAATCCTTTGCAATGCATTAACGTACACATTTAAAGGATTCTATGATG
CATTGCAACATCACCAGGCAAGCAAAGGTTTATGCTGTAAGAAGTTTATC
AAAGGCATACGAACAAGTTACCTCAGACTGACCATTCTCTGTGAAGATTT
TGATGACATGTTTTCACTAATGCTGATGTTCTCTTACCTCATTGATGTTG
TGTTGACTTGTTTGCAACTCAGGCTAATGTTATTCACCTACACTGATATG
ATATCCAGGCTAATGATCGCcatttatcttttctttccaATCGTTTCACT
GTTATTTTTATCGGCATCAACATCACAGCTGTTTGAAGTGGGCCAGAAGA
TTCGTTGCTTTGTTCAAGGTCTTCAAGTTGACGTCATCGATCTAGACACT
AAAGTGGAGTTGGATTTACTGCTCTTTCACATTGGATCAGACCCTGTTGT
CATGACAATATGGAAGATGATACCACTTAATCGATCTATTATCGTTTCCA
TTTTCATCAGTATTGTGACGTATTTCACGATGCTACTTTCATTCTTGTGA
ATGTCTAGATCGGCTCACGgcagattcaatccgtcatttaAGTTACCAAG
CATCAAAACTTGGTTGCGTGGAGCCAACATTACTCCAAAGAAACAACACA
AACATCAAAAAAAGGGCTTGGAAATGAATGATGAAATAAAAGGACGGGAA
AATGTGCAAATAGTCAATCAAGTTTATTCAGAAGAAAGTAAAGATACTCC
TCAAAGAAGCCTGGAAACTAGCGAAGTTGCTGATTCAAAAAGGCGGGAAA
ACCAAAACCCACTGGATCCATTTTGGATTGAAGCTGGCAAAAATGGTAAC
CTTAGCAATACAACAGATCAAGAATGcaaaatcttccaaaaatgtTTGAA
TCCATTATTACTCTTGATGAAAGTTTCCGGACTTTATTTTGATGATATTG
GAAGGTACAAGATATTCAATAGATTGAGCAAGATTTATTGTCTGGCAAAT
AATGTGTTCATCATATTAATTTTCATCAGTACATGCGCAGatatcTATAT
GTCAGACTCACTTGTTCAATATTACATGAGATCAGTAAACCTATTATGTG
TGATGAAGTCAGCCATTCAAGTCACCATTACTATGCGATTGTGTCAGAAG
AAATTCCTGTGGAAATTCATTGAGCAGTTAGAATCGTTCATCGTCGATAT
TATCATTGCAGATTGCCCAGATCAACAAGAAAAAGGTTTGGTTCTACCTT
TAGCGTTGTTTACAATCCTTTGCAATGCATTAACGTACACATTTAAAGGA
TTCTATGATGCATTGCAACATCACCAGGCAAGCAAAGGTTTATGCTGTAA
GAAGTTTATCAAAGGCATACGAACAAGTTACCTCAGACTGACCATTCTCT
GTGAAGATTTTGATGACATGTTTTCACTAATGCTGATGTTCTCTTACCTC
ATTGATGTTGTGTTGACTTGTTTGCAACTCAGGCTAATGTTATTCACCTA
CACTGATATGATATCCAGGCTAATGATCGCcatttatcttttctttccaA
TCGTTTCACTGTTATTTTTATCGGCATCAACATCACAGCTGTTTGAAGTG
GGCCAGAAGATTCGTTGCTTTGTTCAAGGTCTTCAAGTTGACGTCATCGA
TCTAGACACTAAAGTGGAGTTGGATTTACTGCTCTTTCACATTGGATCAG
ACCCTGTTGTCATGACAATATGGAAGATGATACCACTTAATCGATCTATT
ATCGTTTCCATTTTCATCAGTATTGTGACGTATTTCACGATGCTACTTTC
ATTCTTGTGAATGTCTAGATCGGCTCACGgcagattcaatccgtcattta
AGTTACCAAGCATCAAAACTTGGTTGCGTGGAGCCAACATTACTCCAAAG
AAACAACACAAACATCAAAAAAAGGGCTTGGAAATGAATGATGAAATAAA
AGGACGGGAAAATGTGCAAATAGTCAATCAAGTTTATTCAGAAGAAAGTA
AAGATACTCCTCAAAGAAGCCTGGAAACTAGCGAAGTTGCTGATTCAAAA
AGGCGGGAAAACCAAAACCCACTGGATCCATTTTGGATTGAAGCTGGCAA
AAATGGTAACCTTAGCAATACAACAGATCAAGAATGcaaaatcttccaaa
aatgtTTGAATCCATTATTACTCTTGATGAAAGTTTCCGGACTTTATTTT
GATGATATTGGAAGGTACAAGATATTCAATAGATTGAGCAAGATTTATTG
TCTGGCAAATAATGTGTTCATCATATTAATTTTCATCAGTACATGCGCAG
atatcTATATGTCAGACTCACTTGTTCAATATTACATGAGATCAGTAAAC
CTATTATGTGTGATGAAGTCAGCCATTCAAGTCACCATTACTATGCGATT
GTGTCAGAAGAAATTCCTGTGGAAATTCATTGAGCAGTTAGAATCGTTCA
TCGTCGATATTATCATTGCAGATTGCCCAGATCAACAAGAAAAAGGTTTG
GTTCTACCTTTAGCGTTGTTTACAATCCTTTGCAATGCATTAACGTACAC
ATTTAAAGGATTCTATGATGCATTGCAACATCACCAGGCAAGCAAAGGTT
TATGCTGTAAGAAGTTTATCAAAGGCATACGAACAAGTTACCTCAGACTG
ACCATTCTCTGTGAAGATTTTGATGACATGTTTTCACTAATGCTGATGTT
CTCTTACCTCATTGATGTTGTGTTGACTTGTTTGCAACTCAGGCTAATGT
TATTCACCTACACTGATATGATATCCAGGCTAATGATCGCcatttatctt
ttctttccaATCGTTTCACTGTTATTTTTATCGGCATCAACATCACAGCT
GTTTGAAGTGGGCCAGAAGATTCGTTGCTTTGTTCAAGGTCTTCAAGTTG
ACGTCATCGATCTAGACACTAAAGTGGAGTTGGATTTACTGCTCTTTCAC
ATTGGATCAGACCCTGTTGTCATGACAATATGGAAGATGATACCACTTAA
TCGATCTATTATCGTTTCCATTTTCATCAGTATTGTGACGTATTTCACGA
TGCTACTTTCATTCTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011062XLOC_011062Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019651-proteinTCONS_00019651-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019651-exon-sc0000333-1491911889:194525..195160TCONS_00019651-exon-sc0000333-1491911889:194525..195160Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1510915933:194525..195160TCONS_00019651-exon-sc0000333-1510915933:194525..195160Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1575043694:194525..195160TCONS_00019651-exon-sc0000333-1575043694:194525..195160Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1491911889:197630..197824TCONS_00019651-exon-sc0000333-1491911889:197630..197824Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1510915933:197630..197824TCONS_00019651-exon-sc0000333-1510915933:197630..197824Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1575043694:197630..197824TCONS_00019651-exon-sc0000333-1575043694:197630..197824Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1491911889:199064..199214TCONS_00019651-exon-sc0000333-1491911889:199064..199214Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1510915933:199064..199214TCONS_00019651-exon-sc0000333-1510915933:199064..199214Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1575043694:199064..199214TCONS_00019651-exon-sc0000333-1575043694:199064..199214Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1491911889:201400..201613TCONS_00019651-exon-sc0000333-1491911889:201400..201613Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1510915933:201400..201613TCONS_00019651-exon-sc0000333-1510915933:201400..201613Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1575043694:201400..201613TCONS_00019651-exon-sc0000333-1575043694:201400..201613Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1491911889:202334..202402TCONS_00019651-exon-sc0000333-1491911889:202334..202402Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1510915933:202334..202402TCONS_00019651-exon-sc0000333-1510915933:202334..202402Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1575043694:202334..202402TCONS_00019651-exon-sc0000333-1575043694:202334..202402Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1491911889:202807..202896TCONS_00019651-exon-sc0000333-1491911889:202807..202896Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1510915933:202807..202896TCONS_00019651-exon-sc0000333-1510915933:202807..202896Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1575043694:202807..202896TCONS_00019651-exon-sc0000333-1575043694:202807..202896Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1491911889:203878..204006TCONS_00019651-exon-sc0000333-1491911889:203878..204006Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1510915933:203878..204006TCONS_00019651-exon-sc0000333-1510915933:203878..204006Clytia hemisphaericaexon
TCONS_00019651-exon-sc0000333-1575043694:203878..204006TCONS_00019651-exon-sc0000333-1575043694:203878..204006Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000333supercontigsc0000333:194525..204006 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.101628 0.285103 0.295013 0.386022 0.0433095 0.0296524 0 0.0686521 0 0.178609 0 0 1.58393 1.69131 0 0 0 0 0.966269 1.54763 0.134517 0.0806974 0 0.0503958 0 0 0.591261 0.545915 0.219058 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009318Gustatory_rcpt
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0050912detection of chemical stimulus involved in sensory perception of taste
Vocabulary: Molecular Function
TermDefinition
GO:0008527taste receptor activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050912 detection of chemical stimulus involved in sensory perception of taste
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008527 taste receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019651 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top