XLOC_011062 (gene) - C. hemisphaerica

Overview
NameXLOC_011062
Unique NameXLOC_011062
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000333:194525..204006+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011062 ID=XLOC_011062|Name=XLOC_011062|organism=Clytia hemisphaerica|type=gene|length=9482bp|location=Sequence derived from alignment at sc0000333:194525..204006+ (Clytia hemisphaerica)
GAAAAATGAAGTCTATATAAACAGACTCTAAACTCAGAAAATCAGAAGTT
TCGAGAAAAAACGATTAAGAACATAAGACTGGAACTACACCAGAGAAGTT
ACAGAAGTTACTCTTAAAGCGAGTGAAATGACGCCCAGAGTCTATAATGT
CTAGATCGGCTCACGgcagattcaatccgtcatttaAGTTACCAAGCATC
AAAACTTGGTTGCGTGGAGCCAACATTACTCCAAAGAAACAACACAAACA
TCAAAAAAAGGGCTTGGAAATGAATGATGAAATAAAAGGACGGGAAAATG
TGCAAATAGTCAATCAAGTTTATTCAGAAGAAAGTAAAGATACTCCTCAA
AGAAGCCTGGAAACTAGCGAAGTTGCTGATTCAAAAAGGCGGGAAAACCA
AAACCCACTGGATCCATTTTGGATTGAAGCTGGCAAAAATGGTAACCTTA
GCAATACAACAGATCAAGAATGcaaaatcttccaaaaatgtTTGAATCCA
TTATTACTCTTGATGAAAGTTTCCGGACTTTATTTTGATGATATTGGAAG
GTACAAGATATTCAATAGATTGAGCAAGATTTATTGTCTGGCAAATAATG
TGTTCATCATATTAATTTTCATCAGTACATGCGCAGGTGAGACTAATCAA
TTTTTCACATTAGACTCGGGCAAAGGCCTAAGCATTCGATTCTTTCGTTT
ATATAATAGCAAtgaatttgcaatttttttcccgaaaaagGCAAAAGGTG
TGCAGCACACTACAATCtccctcgaaatatattgagattttagtgtattt
taacgtttttcagaatttaaagttcgggcgagaattgctattttagcact
tccactttcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNgttaaaactctactttccaactgtagttta
aggcgcttaaaaatcaattatggtgttcaaaattacaccgggaactcccc
tttgtctcaaatatttcttgtaggATTGTAGAAGATCTCGAGAAAAACTT
TCCAATGAAAATTAACTCTTGCAAAAATCAGTATATTTAAGGTATATTTC
TGGCTTTTAACAAAAACTGTATTCAGAGCTGATGCATCATTCCTTTGGCC
AATATGGATTAGTAAAATTTCCTACAATATTTCAAAGCACTCtgattttt
tttagatatcTATATGTCAGACTCACTTGTTCAATATTACATGAGATCAG
TAAACCTATTATGTGTGATGAAGTCAGCCATTCAAGTCACCATTACTATG
CGATTGTGTCAGAAGAAATTCCTGTGGAAATTCATTGAGCAGTTAGAATC
GTTCATCGTCGATATTATCATTGCAGATTGCCCAGATCAACAAGAAAAAG
GTATGTGTTATATCTCTGATTTTTCACTAATGATTGGTGCCTGAGCACCA
TGAAACTATGAGTTTGAAACAtagatattgtgtcaactcCTTATTATATC
TCTGTTATATCAATGGcttgatttttgaaaaggttttgaaagtttaaatt
CGACAACTTTCAGGCTTAGCATAATCTAAAACAATGCCTTTGTGTCACTT
TTAGGAGGAATTGAGTTTGGAAATGCTTACTAATAATGTGTAGTGTCAAT
CTGACTTCTGGAGTCTCAAATTTTCACAacaactaccttaagggaactta
ttttggcgggaactaattttggcgagcggcgcaaatcttgaaaaaattta
attttggtgggaactaattttggcgagtcaacgaaatttttaattttggc
gggaactaattttggcgaatgacagcgtaaatctattttgccttattttg
agcaattttgatgaatttcaagggtatatttaggcaaggaaaccaaaaaa
tttaattttggcgggaacttattttggcgagtgagcaaaatatttaattt
tggcgggaactaattttaatccgctaaaattagttcccgccaaaataagt
tcccttaacgTATTGTAAATCGCGCGTTCGAGCCATAAGATAACTATTAC
CCTTTGGGGGGTTAATTAGGCAAATGGGTGTCAGGAATGTACGAGCTATA
AGCCATTAAGGGTACTCTCAATGTTTCTCACAGgggtaaaaaaacaacaa
ccaTAAACCAGCAGTTGGCCCTCCGAACaatacaaaatttaaaatatcga
aaattggaaaataggCCCTCGCAAGGGTGTAGGGAtgtaaaacgtcaaaa
aagggGAACAATTTCGAAATTTAGTCTCTCACAAGATCGATTTTGGAACT
CTGGTTCGGACAAAATCGTCCCCTACTAGTACCCTCCTAGCCCGGGATAT
TATGCATTGATTAAATAAATATCTTCGGttataaattttttgtaaaaaat
accTATGACTATGACTGTTAGACACTTTTAGTGGTTTTTCACTGTTTAAA
TTTTAGGTCGCCAAATGATTCGAAAAAGTCGTTTCTTCTTGGCAAAACTC
ATTATCACAATCCTGATATACGTTAGTGCTTTTATGACAATGATCTACAA
ATACCCAGATAATTTCCTGTACAAAAGCTTGGAGAAGAATTACCTGCCAT
CTCTATGTAAAATTTTGATCATGATCCCGTTCGTAACAGGTTTGGTTCTA
CCTTTAGCGTTGTTTACAATCCTTTGCAATGCATTAACGTACACATTTAA
AGGATTCTATGATGCATTGCAACATCACCAGGCAAGCAAAGGTTTATGCT
GTAAGAAGTTTATCAAAGGCATACGAACAAGTTACCTCAGGTAAAAACTt
acatatgtttttttttcggagAGAATTGAGTGGTATTATTATTAAAAAGT
TTGTAAAACAACATTGGGCTGTTCAAGTAAATCGTCAAagagggtggacg
aaccttttcaagacaaaaaaaaatcctGGAAACATGTGGATGCCCCCtgg
aaaatgggaaaatttgcaaaagaaccattggaaaaatcattttcatatct
taaagtgagggtgaacgaactaaaatcagtctttttatcccctgaaaaaa
aaaaatactcctttaagaccccctggaaattctacTCAGATTACCCCCtg
catggatataaaatggccCATTAAAACAACGTATAATAACGTATACGTAT
ATAACTCATACTCATACTATATACAACATGTATAAACAATGCGttaggtc
gtgggttcaatccccagccTGGTCATACCCAAGACTTCGTACTTAGtaca
aaaaagtacaaaaagacgCCTCTCTGCTTGAAGCTCCGCAATTGAAGAGA
ATGATCAAGAGTTAGAGGAGCAATgcgtcaaaaacttcaaaaaatcgaaa
ttatgCGAGCCTCGATTAACGTAGTCTAGTATATTGAGATTAGCCTATAA
GAAGATTCTACTATGGCCTTAATCCTTGACAAAAGGGGAtttctcaaaat
cttaaaaCCAAAATGATTGGAAAGTGAAGCTTTAGCTCTGAGTTTTAAac
gtcacagacccgctgggaccccagcccaactGCAAACTTTTATCCCTGTT
GGGAAagataccctagaatttcagctccactgggaaattgactttgtttt
tatcccaattcgaaattcaattaaaaaattacactccaaaaccatcccaa
cgGATTTTTTGTACACTGAGtttcagaggttaagttttcaaagaatatac
taacctctgaagaccaataatagaaattttatcgcgcatgtgtcaatcta
atcactgtagaaaaatcaaagatgaagagcaaatattaccaTATTAATGT
CTAGCAGGAGACGATATCAGTATACATGTTTACTATTGACGAATTCCCCA
GCGAAACTTCCAAGTGTAAtcgaaatgagtttctttcaaaagaaatcttc
tacatgattcccaaatgtataacagtaattactaaattATTAATTATGGT
AATACTAATTCAATGGGATCGTAATAATAGAGAAATCTTGTGTtacgatt
ctctatcactgactctttttaaaaagcgttgatgacatttctgagttGTA
ATCAACGACGGGAATAGATATATCGACTATGaccctcatccaagatcttg
gatgtcgtcatggttacttttctctgcgttgattgcgcgctgaatagaaa
ctcgattggtcggcacaggtcaatatatgattttggccTGTGCTTTTCAA
GGTAGATTTTTTGACCTGGGAACAATAAAATATCTATTcctattgggatt
tcaatagaaatctTTATCACCGCTTGGGAACAggttccactggggctgtg
aggcagggctgtttttaacattagacttaaaatTTAGGAACTTAAGATTT
CAGGATCTAAAATGATCTAAAATGATCCAATAGATAAGGCTTAGAATATA
TTCTAGTAAAGCCGATAAAACCCCCCTAAGAAAAACCCAATGACAAAAAG
TAGAAGTGCTGAAATCACCATTCTCAcctgaacttgaaattttgatcaac
gaaaaaatactcaaaaatgctATTTTATTTTGAGCAGTACAGTGGATCTC
TTtatttcgaacctctataactcgaatgcctCCTTAGCTCGAACAAGTTT
TGTGGTCCAAATGCATTATAAATcttactcgaaatttccttaaatcGAAA
ATATTTCTGTTCCCCGTCCGAGTTCCAGTTATGGAGACTTCATCGTATTT
TAGTTTCCTTCCCAAGTGGAGATTTGAGAAATATAATGCAGGAGTGCTTT
CAATAGTGCTCGAATcttggtcgaaatatattgaaatttttagtgtattt
aaaagtttttcagaatttagagTTTGGCTATTTTAGTACTTCCTCTTTAT
TTCATTGAATATTCCAATTAAAAggtttgagcttttaaatcctgagactC
TAACGTTTTActagtcttaagtctcatgttaaaattCAGACCTAAAACTG
TATTTTTATTACTATTTTATTACAGACTGACCATTCTCTGTGAAGATTTT
GATGACATGTTTTCACTAATGCTGATGTTCTCTTACCTCATTGATGTTGT
GTTGACTTGTTTGCAACTCAGGCTAATGTTATTCACCTACACTGATATGA
TATCCAGGCTAATGATCGCcatttatcttttctttccaATCGTTTCACTG
TTATTTTTATCGGCATCAACATCACAGCTGTTTGAAGTGGTAGGTTTTTA
CTGTACTGCAACCCAATATTATTTCGTACATCtgaaatgaatgaataaat
aatGGAGTGGCGGCTTTATGTGAGCCGAAATAACGATTTTCTATCAAAAG
gtgctattcatgatattcctgacataatgttttctacggaaagacccggt
ttttgccagtagtggcaaattctatacaacttttgtctagtttaaatttg
ccactactggttAAAACTGGGGTATTTCCGtaaaaaaacattacgtcatg
aatatcatgaatcgtTTCTTGATCCTTTATTGTTAAATTCGAGGTATTTT
GAATAACAGCTAGACGATAAATATTTCTTTAtcatttattttctatttcc
cCCAATCTAACTTCACGTATTTGATCATAGTTcgtaaaaaaccccggtct
gcaagccttttgtttctttccattgttccctacttgaacttgcgtttgag
aaattagtttgttttgctcgctttttgatcatgtgattaaatcttaaacc
aattcCAAGAGGAATAAATACTTGGTatcgtgatcaaaaactgagcaaat
cgattttcatcttttgatattaacaaaggaaaaagctatcAAAAAGCTTT
CAGACCAGAGTTTTTTTACGGACTatgatttgattgaaatttcaaCAATC
CGATACCaaataatgatttttcaaaGTGAATTTAATAGAATATCTCACGC
TTATAACAGGGCCAGAAGATTCGTTGCTTTGTTCAAGGTCTTCAAGTTGA
CGTCATCGATCTAGACACTAAAGTGGAGGTAAAGTATTTTAGGCACacaa
actttcgcaagcagaaagtttcgcgaggtcgaaaaatcgcgaaatttacg
atATTTACTTTCGcggatttgaagaaaaaatgtttttcccgAGCATAAAT
cgtttgaataaaaatgaaatttttcaaatgaaaattgccttaaaattgaa
aacattCCTTAAATTCGATAAAGACGGTTGCTCTTCAACTTTAAAAGGCA
TTAAAGGATAGAGTAGTAGTCAAAGATATCCTGCTTTTGCGGAACAAATG
ATTTAATTACATGCAAGAAACCAGTTTAGTAACCAGAAGAACAACTATGA
GAATCCCTTGAACTCCAACGGCCGttaaaaaattgttcaagaTCTAAAAA
CTTCCACTAATATGTTTTTCGTTGCTTTTCAGTTGGATTTACTGCTCTTT
CACATTGGATCAGACCCTGTTGTCATGACAATATGGAAGATGATACCACT
TAATCGATCTATTATCGTTTCCGTAAGTTCTGTAAACACAATTTAGCGGG
GTTTAGGGAAAGGTCCGACTCGGAGGGCTGCGAGTTCGAAATAGACCGGG
GATAGGCCATGTAGTGAGGTCACCTCTAGGGTCGCCTTTTGACCAAGGTG
GCGGTTCCAGGTCCCATAATAAGAGACAGATCATTGGaagaagaaataaa
acaaaaaaatgttgcaaaaaaaaattactaaatggaatttcaaattcaat
atcGAAAGTGATTTTTCTTCTTCGCGCTTTTGTGAAATTTCGGTTAGAAA
CTAAGTAGGCTACTCTACTCACCTTTTATcaaaaagagtttcttatagga
aaTATACCTATAATAGAGGTTTGCGATTCGGACTATGCAATAAGAAACAA
ATTTATAAAGACTCAATACCGTATTCCGTTTGCTCGTTGTTGAACATTTC
TGTATTTGAGTCTTTGAATCTTCATGATTGGTCCTCATAGCATTGCTTCT
TTCTTTCTTAACTGAAAATACAAAAACGCATATAAAGTAAAGCTGTATTA
TTTATAAATAAAAGGATGCTTTAAATTTTAGCTTatagaatttcaatttt
attttttcgcaaCCGAAAAAACGGGACTCTCTTAAATGATACAAATTgcc
attttaaaatgtttaaaaacgACAAACTCGAACCCAAGTCTCTTTAAATT
CACCTTTTTCATGATTCTGATAGCCTTCACGAAATGTTTGCACCAGTAAA
AGCAAGCGTAGCTCTTGGAGACGGGATTGACGAGATTGGAAAAACGGTCA
ATAAAGTTCCTTATATTGGGATTCAAAAAAGTAGTTTAGTTGTCTggatt
ttagtttttagttCATTAAAATAGCTGCCCCCCCACtgattaatttttcg
aaaattttccacccaggacattcttattccaccccctcgctttttaagat
tttttccaaccccctggcTATTAGTATACAGTATCTTACTACTTTTCTTT
TAGATTTTCATCAGTATTGTGACGTATTTCACGATGCTACTTTCATTCTT
GTGATGCTGGTTTGCTTAATACTGTACTCAAATTTTGATATCACATTCTT
CGCTCGTTATtgagctcttccagaaaaaaatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019651TCONS_00019651Clytia hemisphaericatranscript
TCONS_00019652TCONS_00019652Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019651-proteinTCONS_00019651-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000333supercontigsc0000333:194525..204006 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.43	1.92	1.12	0.82	0.04	0.03	0	0.08	0	0.34	0.06	0	2.46	1.76	0.07	0	0	0	0.97	1.55	0.13	0.23	2.92	1.7	0.13	0.22	1.93	1.73	1.44	1.7