TCONS_00019326 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019326
Unique NameTCONS_00019326
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019326 ID=TCONS_00019326|Name=TCONS_00019326|organism=Clytia hemisphaerica|type=transcript|length=2178bp
AGAAAATGCAACGGCAAAATAGCATTAAGTTAAGAGACACTAGCTAAAAT
AGTATCTGAAACAAAATGAGAATCAAAGATATTTGACTGTAAATCGGTAC
TCTGTAGTTGACTTGGTAATTCATTTCTGAAGTTGATAATATCTACCTAA
AAGGCTTTGACCAGAAAgttagattttgagattttaaaattcaaattttg
tttaaattgtTATGAAGAAAGGGTATGATGGAGCTGAATTATGGCCTTTT
GAGTCATCGGCTAGTAGTACTGGAAGCAGTGTCCGGTCATCTGGTCGAAG
GAGGAGAAGTGGACAAGTCAATAATGCGGACAACAAACAACAAGAGACAA
ATCTAGATCATCCTACTAAAGAGAAAGAAAAGACCGAAATGATAAGCGGA
GATaatatgaaaaaacaaccaatcacTTACTCAGCTTTTGGCGTCACCAT
ATCGACTTTTAAAGACCCTTTCGATTCATCGTCTTCACCGAAAAATTCAA
CAGTATCTCCATCGAACCTCTCAACATCCAAAGGGAAACcatcaacaaaa
aacaaacaccaCAAACATAGAAAGCCAAAGAAAGATACAAAACCTGAACA
TCTCTACGAAGGAGTTGATGCAGATACCATCCCCTTATTGGCTGGTAGAA
GAGCGCGCTCTAATACAAGTGCTGGAAGCTCTTATGGATCTTCAAGATTG
TCTTTCCTAGCTAGGGAGTCAGGGAGCATCAATAATTTACGTGGAGATGG
CACCGAGTTTCACGAAGAATCATTGAATAAATCCGACTTCTGCGCCTCAT
TATTCCTTCCATCACTTAGTTTCCAGTCCTCTCTACCACGTGGTCGACAT
ATATTTGATGATACACGTGGCTCTTCGAATTCAGTCATGGAATCGTTCGT
GGAGAAATTGTATCCGGACCGTCGAGGAACCATCATGTTAGCCACGTGGA
ATTTGTTACCATTATTAGCCGGAAGTGCTGTTTTCACCATGCCGTTTGCA
GTCGTGATTGGAGGATATTTCTCgcttgttttcatgctggttaTGAGTTT
GATGGCTGATGTAACTGGGGTCTTATTAATTGATTGTTTATATGAAATCT
CGCCCAATAGTGGAACAAGAAAACGTGTTCGAAAAGATTTTGCTGACATT
GGAAGATCAGTGTGGGGGAGAACAGGTGCTTTTATTGTGCACTCCTTCTT
GGTAGTTTATCTCTTCTTAGGTGATGTCCTTAATATGTTGTTATTGTCTA
AAAGTGTATATTCACTGCTTCACACATGTACCAAGTTATCATTCGTTGCT
TTATCGTGTTTATTTTCGATCTTGGCTTACCCGACCTTATTCATCAAACG
ACTGACTATTCTCGCTTACATCAGCTTACTTTCAATCATTACAATTTTAT
TCAGTATCGTTGCCTTAATCTTTGTTTTCATCCATGAACGCGATTCCTGG
TCACATAACTATAAAGATATTCCGTTCCTGAATATAGAGCGTTTCCCTCT
TGCAGCAGGTATCATAATGTTTTCATGTATCTCGCACTGTGTTCTACCGC
AAGTTGAAGGGAACCTTATGGACGCTTCAAATTcatcaaaagttattcat
aTATCATATATAACATCAGTTTTAATCAATATTCTTATTGGTATATTTGG
TGCACTCACCTTTGGCTTGAAGACTGAGAGTTTGGTAACTCTAAATGCAA
GCCGTATTAATGAGATTATCAGAACAATTATTGGAGTATCATCGATAGGT
TATTCTGTACTTAACTATCCACTGAATATGTTTATTATTTGCGAAACTGT
CGATAAAATCATCCACGATACAAAAGTTGAGCAAAACAAGAAATATTATT
ATGCCTGGGTGGCTTTGACGAGACTTGTTTTATTTGCATCGACTGTCGGT
TTAGCACTTCTTATCCCATATTTTGGAATTCTTCTTTCGCTACGAGGCTG
TCTCATTGGCACGTGCCTAGTTTTCGTATTTCCGTGTTACTTTCacttga
aactaaaatggcagcTGCTGTCATGGTTTCAAAAAACAGTGgagatatct
ttattggttatTGGAGTGGTGCTTGGATTGTGTGCTTTATATGGGACAAT
AACGAGTCTCGTCTACGCTTTTGAGACTGGCGTTGAATTGTAATTATAgc
atttctttattttgtatgtaaagcaaaa
Run BLAST on NCBI

protein sequence of TCONS_00019326-protein

>TCONS_00019326-protein ID=TCONS_00019326-protein|Name=TCONS_00019326-protein|organism=Clytia hemisphaerica|type=polypeptide|length=643bp
MKKGYDGAELWPFESSASSTGSSVRSSGRRRRSGQVNNADNKQQETNLDH
PTKEKEKTEMISGDNMKKQPITYSAFGVTISTFKDPFDSSSSPKNSTVSP
SNLSTSKGKPSTKNKHHKHRKPKKDTKPEHLYEGVDADTIPLLAGRRARS
NTSAGSSYGSSRLSFLARESGSINNLRGDGTEFHEESLNKSDFCASLFLP
SLSFQSSLPRGRHIFDDTRGSSNSVMESFVEKLYPDRRGTIMLATWNLLP
LLAGSAVFTMPFAVVIGGYFSLVFMLVMSLMADVTGVLLIDCLYEISPNS
GTRKRVRKDFADIGRSVWGRTGAFIVHSFLVVYLFLGDVLNMLLLSKSVY
SLLHTCTKLSFVALSCLFSILAYPTLFIKRLTILAYISLLSIITILFSIV
ALIFVFIHERDSWSHNYKDIPFLNIERFPLAAGIIMFSCISHCVLPQVEG
NLMDASNSSKVIHISYITSVLINILIGIFGALTFGLKTESLVTLNASRIN
EIIRTIIGVSSIGYSVLNYPLNMFIICETVDKIIHDTKVEQNKKYYYAWV
ALTRLVLFASTVGLALLIPYFGILLSLRGCLIGTCLVFVFPCYFHLKLKW
QLLSWFQKTVEISLLVIGVVLGLCALYGTITSLVYAFETGVEL
Run BLAST on NCBI

transcript from alignment at sc0000325:9754..17178-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019326 ID=TCONS_00019326|Name=TCONS_00019326|organism=Clytia hemisphaerica|type=transcript|length=7425bp|location=Sequence derived from alignment at sc0000325:9754..17178- (Clytia hemisphaerica)
AGAAAATGCAACGGCAAAATAGCATTAAGTTAAGAGACACTAGCTAAAAT
AGTATCTGAAACAAAATGAGAATCAAAGATATTTGACTGTAAATCGGTAC
TCTGTAGTTGACTTGGTAATTCATTTCTGAAGTTGATAATATCTACCTAA
AAGGCTTTGACCAGAAAGTTAGATTTTGAGATTTTAAAATTCAAATTTTG
TTTAAATTGTTATGAAGAAAGGGTATGATGGAGCTGAATTATGGCCTTTT
GAGTCATCGGCTAGTAGTACTGGAAGCAGTGTCCGGTCATCTGGTCGAAG
GAGGAGAAGTGGACAAGTCAATAATGCGGACAACAAACAACAAGAGACAA
ATCTAGATCATCCTACTAAAGAGAAAGAAAAGACCGAAATGATAAGCGGA
GATAATATGAAAAAACAACCAATCACTTACTCAGCTTTTGGCGTCACCAT
ATCGACTTTTAAAGGTATCAAATCTTAAGATTCGAAAAAGTGACGGTTTT
AAATTAATGACTTTTTATTATATATTTTAAGCGCTGAGGCTTAGCTCCGA
GTCCAAGCGTTACAGTATTACTGTTTCGATATAAACGGGGAAATACTCTT
CTTTTTTTTTTTTGATATTACAACCCTTTGAAACGAACTTGGTTCAAACA
TGAGTGATCCTGAGCTTTATTGTCTTGATACCCGAGTCACTATCTCGACA
TTTAAAGGTACTTTTTATATTTCAATATACATAATTTGCTACGGTTAGTT
TTCTTTTTATGATCACCATCCTAGAATCTAGGTCTTAAGGGACCTAAGTC
GAGAACTCAAAAAAACCCTCCCACCACGGCTCTCGATCAGCCATTGAAGT
ACCAAGTTCCTCAATCTCTAGCCCTGTTTCCTGTTTCAAAACATCAATAA
ATGTGCTATACTTACTTACTCTGACGCTTTGGGCCAGTAGGACACCAAAG
TAAGATTTCTCTTCTGTGCAACCAAAGGTGCAACAAGTTCATACCACTAC
TCGGCCCTGACGCAGATCGGGACCACTCTTTTTATCGTTTTATTCCTTAA
ATTGGGGACCAATGAACATAATCGAAAGATTAAGCTTAGAAATTACCGTC
AATCAAGACAAGACAAGACATACACCTTCCCAAAAATGGGAATAGGCCCT
AACCTAAGTCAGAGATCACTGCACAATATATTACATAAACAATAATGAAA
ATAAATAACTAAAGAATAAATGACTGCTATTAAAATAAAAATCTACGAAA
TATTGTTAATCAACTTCCACCATCTCAGTCTATCAGAGGCAATCACATAC
CAATTACATTTATCAATACCAGCTTTTTTCAAACATTTAGAAATAGANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCGCCGAAACTAAGCTCTTCAAAGTTGAAATACTCTTCCT
CGCAAAAGTCTTCATTTTCTTCTTCATCAAATTTTTTCAATGCAATTTTT
GAATTTTCATATTCAGGGATAGTTTGTCTAACAGAAAATGTATAACATGC
CATAGTTTTGTTGGTTACATCAGTCAGAAAACACATTTTAAACACGGCAA
TTATGAAAAATTCACTATGGTCAGAGCCCTTAATACAATGCCGACTCCTT
GCGAGCCACGATTACACGCATCGTTTGTTTTTTCAAGTCCGTTTGTTATT
AGTTTGAACTTGTCACAGTCAAGAGTCTCATGTCTGAATCTCCATGTTTC
CTGAAGACACATACCCCAAACATTTTTACGTAATGATAGCGAGTTGTACA
ACTCTTCGAGTCTCGAGGCAGATTTGATTCCACGTACATTCTGCGAAATG
AAGCAGATGTTCTTCATAAGCTTTTTAGCAACCATGCTTGTGAGGCTATG
GGGTGCTACGAGTGTTGATTGCCAGATCCCACCGTATCCGGTAATCCAAT
TGGATTCGCGAGGAGTACAGCCTCTTGGATTGACCACTCAGCTTGAATGT
CGATTGTCTTCACTTCATTCGTTGTTGCGTGTATAGGTGTGGTGGCTCAC
CCCCATTTAATTGAGGAGGATTTTCTTTCCACCACCACACCCTTTTGTTG
TTTTTTGATCTTTTTGATCTTTTTGATCTTTTTGATCTTACCGTCAATCT
CTTTTCATAATTTCTTCTTCTTACCTAACTCCTGAGGGCAATCGATTTTA
AAACGACCGTGTGTGTGGCCAAAATCTAGGACTATAAACCAGGCCCTTAC
AATGCAGAGAAGATTAAGCTAAATCTTATTAAAGTTTGGCGAAAAATTGA
CCCTTACGGTGTACTTTCTTGAAAGTTTTTGTCTATTTCATGGCAAAATA
GTCAGGTTTTCCAAAAAACTCCGTTTTTCTCACTTTTTACACCCTAAAGT
GCATTTCTGTTATTACGACCCTTAAAATGCACCTTTAGAAGCCTGAAAAG
GCACTCCCCTAGGTACCTGGCTTTAGAGTTTAAATCAAAGCAGTCTGTTC
AGTTTCTTCTCATGGTATGTAAGGGTTTAGTCCCGGAAAAAGTCTTACCG
AGAGTTTGAATAGCAGTACTTCTTTTATTCCTCATCAGTTAAAATCAATT
AAGATATTAAGCCCTCCAATATCTCGAAACGGTCCTACCAATAGGGGAAG
AGGAATCACTGAGCAGACAACCATTGCAACTCTTGAGATACGACCGTCGA
CTAATTTAGAAAGATTGATTATAAGTGGAGAAATCTAGTTACAAAGATCT
CCAAGCCTTTTTCTCTGAGAGTTTTCAAGATTCTTTTTCATACTTTTACT
ACCTAAATTTGCAGTCTTCAGAATAAAGTATTTCAACCGTCACAAACCTT
ATATTCCAATTTTTCAGACCCTTTCGATTCATCGTCTTCACCGAAAAATT
CAACAGTATCTCCATCGAACCTCTCAACATCCAAAGGGAAACCATCAACA
AAAAACAAACACCACAAACATAGAAAGCCAAAGAAAGATACAAAACCTGA
ACATCTCTACGAAGGAGTTGATGCAGATACCATCCCCTTATTGGCTGGTA
GAAGAGCGCGCTCTAATACAAGTGCTGGAAGCTCTTATGGATCTTCAAGA
TTGTCTTTCCTAGCTAGGGAGTCAGGTATGAATAACTTCAACAACAGAAA
AGAGCTTATGATTTAGGCTGATATTTGGTCTATTTACCCTTTCGAAACTT
AGAACATTTATTCATAATTTCACTTTTTGAGTCTGAACCCTTTTCTCTGA
GTCGTTAGCCCTTCCTTTAGCCCAACATCAAGTTACCGCACATTTAAATG
CCAGTATCCTAAAGGAAATGATTAAGTCTGTGACTGCATCCGGAGGTTAC
TTGAAAGATCCTCTTTCAATAGGGTCTATCAGAAGGTGGGGGAGGGGGCG
CCACTCTTTATCCCTGGATTGCTCCATTTCCTTTTGATTATTCTTTGTCT
TTGGTAGGATCCGCTCTGACTTTTCAATTAACACTGACTAAAGAGACTTT
TTTTGATCTCGTTTTAATAGCTTTATCTGGTCTTCTTTTTAAACACTACA
TTTTTCTTCTTTATTTAAGGGAGCATCAATAATTTACGTGGAGATGGCAC
CGAGTTTCACGAAGAATCATTGAATAAATCCGACTTCTGCGCCTCATTAT
TCCTTCCATCACTTAGTTTCCAGTCCTCTCTACCACGTGGTCGACATATA
TTTGATGATACACGTGGCTCTTCGAATTCAGTCATGGAATCGTTCGTGGA
GAAATTGTATCCGGACCGTCGAGGAACCATCATGTTAGCCACGTGGAATT
TGTTACCATTATTAGCCGGAAGTGCTGTTTTCACCATGCCGTTTGCAGTC
GTGATTGGAGGATATTTCTCGCTTGTTTTCATGCTGGTTATGAGTTTGAT
GGCTGATGTAACTGGGGTCTTATTAATTGATTGTTTATATGAAATCTCGC
CCAATAGTGGAACAAGAAAACGTGTTCGAAAAGATTTTGCTGACATTGGA
AGATCAGTGTGGGGGAGAACAGGTGCTTTTATTGTGCACTCCTTCTTGGT
AGTTTATCTCTTCTTAGGTGATGTCCTTAATATGTTGTTATTGTCTAAAA
GTGTATATTCACTGCTTCACACATGTACCAAGTTATCATTCGTTGCTTTA
TCGTGTTTATTTTCGATCTTGGCTTACCCGACCTTATTCATCAAACGACT
GACTATTCTCGCTTACATCAGCTTACTTTCAATCATTACAATTTTATTCA
GTATCGTTGCCTTAATCTTTGTTTTCATCCATGAACGCGATTCCTGGTCA
CATAACTATAAAGATATTCCGTTCCTGAATATAGAGCGTTTCCCTCTTGC
AGCAGGTATCATAATGTTTTCATGTATCTCGCACTGTGTTCTACCGCAAG
TTGAAGGGAACCTTATGGACGCTTCAAATTCATCAAAAGTTATTCATATA
TCATATATAACATCAGTTTTAATCAATATTCTTATTGGTATATTTGGTGC
ACTCACCTTTGGCTTGAAGACTGAGAGTTTGGTAACTCTAAATGCAAGCC
GTATTAATGAGATTATCAGAACAATTATTGGAGTATCATCGATAGGTTAT
TCTGTACTTAACTATCCACTGAATATGTTTATTATTTGCGAAACTGTCGA
TAAAATCATCCACGATACAAAAGTTGAGCAAAACAAGAAATATTATTATG
CCTGGGTGGCTTTGACGAGACTTGTTTTATTTGCATCGACTGTCGGTTTA
GCACTTCTTATCCCATATTTTGGAATTCTTCTTTCGCTACGAGGCTGTCT
CATTGGCACGTGCCTAGTTTTCGTATTTCCGTGTTACTTTCACTTGAAAC
TAAAATGGCAGCTGCTGTCATGGTTTCAAAAAACAGTGGAGATATCTTTA
TTGGTTATTGGAGTGGTGCTTGGATTGTGTGCTTTATATGGGACAATAAC
GAGTCTCGTCTACGCTTTTGAGACTGGCGTTGAATTGTAATTATAGCATT
TCTTTATTTTGTATGTAAAGCAAAA

Coding sequence (CDS) from alignment at sc0000325:9754..17178-

>TCONS_00019326 ID=TCONS_00019326|Name=TCONS_00019326|organism=Clytia hemisphaerica|type=CDS|length=5796bp|location=Sequence derived from alignment at sc0000325:9754..17178- (Clytia hemisphaerica)
GGAGCATCAATAATTTACGTGGAGATGGCACCGAGTTTCACGAAGAATCA
TTGAATAAATCCGACTTCTGCGCCTCATTATTCCTTCCATCACTTAGTTT
CCAGTCCTCTCTACCACGTGGTCGACATATATTTGATGATACACGTGGCT
CTTCGAATTCAGTCATGGAATCGTTCGTGGAGAAATTGTATCCGGACCGT
CGAGGAACCATCATGTTAGCCACGTGGAATTTGTTACCATTATTAGCCGG
AAGTGCTGTTTTCACCATGCCGTTTGCAGTCGTGATTGGAGGATATTTCT
CGCTTGTTTTCATGCTGGTTATGAGTTTGATGGCTGATGTAACTGGGGTC
TTATTAATTGATTGTTTATATGAAATCTCGCCCAATAGTGGAACAAGAAA
ACGTGTTCGAAAAGATTTTGCTGACATTGGAAGATCAGTGTGGGGGAGAA
CAGGTGCTTTTATTGTGCACTCCTTCTTGGTAGTTTATCTCTTCTTAGGT
GATGTCCTTAATATGTTGTTATTGTCTAAAAGTGTATATTCACTGCTTCA
CACATGTACCAAGTTATCATTCGTTGCTTTATCGTGTTTATTTTCGATCT
TGGCTTACCCGACCTTATTCATCAAACGACTGACTATTCTCGCTTACATC
AGCTTACTTTCAATCATTACAATTTTATTCAGTATCGTTGCCTTAATCTT
TGTTTTCATCCATGAACGCGATTCCTGGTCACATAACTATAAAGATATTC
CGTTCCTGAATATAGAGCGTTTCCCTCTTGCAGCAGGTATCATAATGTTT
TCATGTATCTCGCACTGTGTTCTACCGCAAGTTGAAGGGAACCTTATGGA
CGCTTCAAATTCATCAAAAGTTATTCATATATCATATATAACATCAGTTT
TAATCAATATTCTTATTGGTATATTTGGTGCACTCACCTTTGGCTTGAAG
ACTGAGAGTTTGGTAACTCTAAATGCAAGCCGTATTAATGAGATTATCAG
AACAATTATTGGAGTATCATCGATAGGTTATTCTGTACTTAACTATCCAC
TGAATATGTTTATTATTTGCGAAACTGTCGATAAAATCATCCACGATACA
AAAGTTGAGCAAAACAAGAAATATTATTATGCCTGGGTGGCTTTGACGAG
ACTTGTTTTATTTGCATCGACTGTCGGTTTAGCACTTCTTATCCCATATT
TTGGAATTCTTCTTTCGCTACGAGGCTGTCTCATTGGCACGTGCCTAGTT
TTCGTATTTCCGTGTTACTTTCACTTGAAACTAAAATGGCAGCTGCTGTC
ATGGTTTCAAAAAACAGTGGAGATATCTTTATTGGTTATTGGAGTGGTGC
TTGGATTGTGTGCTTTATATGGGACAATAACGAGTCTCGTCTACGCTTTT
GAGACTGGCGTTGAATTGTAAACCCTTTCGATTCATCGTCTTCACCGAAA
AATTCAACAGTATCTCCATCGAACCTCTCAACATCCAAAGGGAAACCATC
AACAAAAAACAAACACCACAAACATAGAAAGCCAAAGAAAGATACAAAAC
CTGAACATCTCTACGAAGGAGTTGATGCAGATACCATCCCCTTATTGGCT
GGTAGAAGAGCGCGCTCTAATACAAGTGCTGGAAGCTCTTATGGATCTTC
AAGATTGTCTTTCCTAGCTAGGGAGTCAGATGAAGAAAGGGTATGATGGA
GCTGAATTATGGCCTTTTGAGTCATCGGCTAGTAGTACTGGAAGCAGTGT
CCGGTCATCTGGTCGAAGGAGGAGAAGTGGACAAGTCAATAATGCGGACA
ACAAACAACAAGAGACAAATCTAGATCATCCTACTAAAGAGAAAGAAAAG
ACCGAAATGATAAGCGGAGATAATATGAAAAAACAACCAATCACTTACTC
AGCTTTTGGCGTCACCATATCGACTTTTAAAGGGAGCATCAATAATTTAC
GTGGAGATGGCACCGAGTTTCACGAAGAATCATTGAATAAATCCGACTTC
TGCGCCTCATTATTCCTTCCATCACTTAGTTTCCAGTCCTCTCTACCACG
TGGTCGACATATATTTGATGATACACGTGGCTCTTCGAATTCAGTCATGG
AATCGTTCGTGGAGAAATTGTATCCGGACCGTCGAGGAACCATCATGTTA
GCCACGTGGAATTTGTTACCATTATTAGCCGGAAGTGCTGTTTTCACCAT
GCCGTTTGCAGTCGTGATTGGAGGATATTTCTCGCTTGTTTTCATGCTGG
TTATGAGTTTGATGGCTGATGTAACTGGGGTCTTATTAATTGATTGTTTA
TATGAAATCTCGCCCAATAGTGGAACAAGAAAACGTGTTCGAAAAGATTT
TGCTGACATTGGAAGATCAGTGTGGGGGAGAACAGGTGCTTTTATTGTGC
ACTCCTTCTTGGTAGTTTATCTCTTCTTAGGTGATGTCCTTAATATGTTG
TTATTGTCTAAAAGTGTATATTCACTGCTTCACACATGTACCAAGTTATC
ATTCGTTGCTTTATCGTGTTTATTTTCGATCTTGGCTTACCCGACCTTAT
TCATCAAACGACTGACTATTCTCGCTTACATCAGCTTACTTTCAATCATT
ACAATTTTATTCAGTATCGTTGCCTTAATCTTTGTTTTCATCCATGAACG
CGATTCCTGGTCACATAACTATAAAGATATTCCGTTCCTGAATATAGAGC
GTTTCCCTCTTGCAGCAGGTATCATAATGTTTTCATGTATCTCGCACTGT
GTTCTACCGCAAGTTGAAGGGAACCTTATGGACGCTTCAAATTCATCAAA
AGTTATTCATATATCATATATAACATCAGTTTTAATCAATATTCTTATTG
GTATATTTGGTGCACTCACCTTTGGCTTGAAGACTGAGAGTTTGGTAACT
CTAAATGCAAGCCGTATTAATGAGATTATCAGAACAATTATTGGAGTATC
ATCGATAGGTTATTCTGTACTTAACTATCCACTGAATATGTTTATTATTT
GCGAAACTGTCGATAAAATCATCCACGATACAAAAGTTGAGCAAAACAAG
AAATATTATTATGCCTGGGTGGCTTTGACGAGACTTGTTTTATTTGCATC
GACTGTCGGTTTAGCACTTCTTATCCCATATTTTGGAATTCTTCTTTCGC
TACGAGGCTGTCTCATTGGCACGTGCCTAGTTTTCGTATTTCCGTGTTAC
TTTCACTTGAAACTAAAATGGCAGCTGCTGTCATGGTTTCAAAAAACAGT
GGAGATATCTTTATTGGTTATTGGAGTGGTGCTTGGATTGTGTGCTTTAT
ATGGGACAATAACGAGTCTCGTCTACGCTTTTGAGACTGGCGTTGAATTG
TAAACCCTTTCGATTCATCGTCTTCACCGAAAAATTCAACAGTATCTCCA
TCGAACCTCTCAACATCCAAAGGGAAACCATCAACAAAAAACAAACACCA
CAAACATAGAAAGCCAAAGAAAGATACAAAACCTGAACATCTCTACGAAG
GAGTTGATGCAGATACCATCCCCTTATTGGCTGGTAGAAGAGCGCGCTCT
AATACAAGTGCTGGAAGCTCTTATGGATCTTCAAGATTGTCTTTCCTAGC
TAGGGAGTCAGATGAAGAAAGGGTATGATGGAGCTGAATTATGGCCTTTT
GAGTCATCGGCTAGTAGTACTGGAAGCAGTGTCCGGTCATCTGGTCGAAG
GAGGAGAAGTGGACAAGTCAATAATGCGGACAACAAACAACAAGAGACAA
ATCTAGATCATCCTACTAAAGAGAAAGAAAAGACCGAAATGATAAGCGGA
GATAATATGAAAAAACAACCAATCACTTACTCAGCTTTTGGCGTCACCAT
ATCGACTTTTAAAGGGAGCATCAATAATTTACGTGGAGATGGCACCGAGT
TTCACGAAGAATCATTGAATAAATCCGACTTCTGCGCCTCATTATTCCTT
CCATCACTTAGTTTCCAGTCCTCTCTACCACGTGGTCGACATATATTTGA
TGATACACGTGGCTCTTCGAATTCAGTCATGGAATCGTTCGTGGAGAAAT
TGTATCCGGACCGTCGAGGAACCATCATGTTAGCCACGTGGAATTTGTTA
CCATTATTAGCCGGAAGTGCTGTTTTCACCATGCCGTTTGCAGTCGTGAT
TGGAGGATATTTCTCGCTTGTTTTCATGCTGGTTATGAGTTTGATGGCTG
ATGTAACTGGGGTCTTATTAATTGATTGTTTATATGAAATCTCGCCCAAT
AGTGGAACAAGAAAACGTGTTCGAAAAGATTTTGCTGACATTGGAAGATC
AGTGTGGGGGAGAACAGGTGCTTTTATTGTGCACTCCTTCTTGGTAGTTT
ATCTCTTCTTAGGTGATGTCCTTAATATGTTGTTATTGTCTAAAAGTGTA
TATTCACTGCTTCACACATGTACCAAGTTATCATTCGTTGCTTTATCGTG
TTTATTTTCGATCTTGGCTTACCCGACCTTATTCATCAAACGACTGACTA
TTCTCGCTTACATCAGCTTACTTTCAATCATTACAATTTTATTCAGTATC
GTTGCCTTAATCTTTGTTTTCATCCATGAACGCGATTCCTGGTCACATAA
CTATAAAGATATTCCGTTCCTGAATATAGAGCGTTTCCCTCTTGCAGCAG
GTATCATAATGTTTTCATGTATCTCGCACTGTGTTCTACCGCAAGTTGAA
GGGAACCTTATGGACGCTTCAAATTCATCAAAAGTTATTCATATATCATA
TATAACATCAGTTTTAATCAATATTCTTATTGGTATATTTGGTGCACTCA
CCTTTGGCTTGAAGACTGAGAGTTTGGTAACTCTAAATGCAAGCCGTATT
AATGAGATTATCAGAACAATTATTGGAGTATCATCGATAGGTTATTCTGT
ACTTAACTATCCACTGAATATGTTTATTATTTGCGAAACTGTCGATAAAA
TCATCCACGATACAAAAGTTGAGCAAAACAAGAAATATTATTATGCCTGG
GTGGCTTTGACGAGACTTGTTTTATTTGCATCGACTGTCGGTTTAGCACT
TCTTATCCCATATTTTGGAATTCTTCTTTCGCTACGAGGCTGTCTCATTG
GCACGTGCCTAGTTTTCGTATTTCCGTGTTACTTTCACTTGAAACTAAAA
TGGCAGCTGCTGTCATGGTTTCAAAAAACAGTGGAGATATCTTTATTGGT
TATTGGAGTGGTGCTTGGATTGTGTGCTTTATATGGGACAATAACGAGTC
TCGTCTACGCTTTTGAGACTGGCGTTGAATTGTAAACCCTTTCGATTCAT
CGTCTTCACCGAAAAATTCAACAGTATCTCCATCGAACCTCTCAACATCC
AAAGGGAAACCATCAACAAAAAACAAACACCACAAACATAGAAAGCCAAA
GAAAGATACAAAACCTGAACATCTCTACGAAGGAGTTGATGCAGATACCA
TCCCCTTATTGGCTGGTAGAAGAGCGCGCTCTAATACAAGTGCTGGAAGC
TCTTATGGATCTTCAAGATTGTCTTTCCTAGCTAGGGAGTCAGATGAAGA
AAGGGTATGATGGAGCTGAATTATGGCCTTTTGAGTCATCGGCTAGTAGT
ACTGGAAGCAGTGTCCGGTCATCTGGTCGAAGGAGGAGAAGTGGACAAGT
CAATAATGCGGACAACAAACAACAAGAGACAAATCTAGATCATCCTACTA
AAGAGAAAGAAAAGACCGAAATGATAAGCGGAGATAATATGAAAAAACAA
CCAATCACTTACTCAGCTTTTGGCGTCACCATATCGACTTTTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010858XLOC_010858Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019326-proteinTCONS_00019326-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019326-exon-sc0000325-1575043694:16715..17178TCONS_00019326-exon-sc0000325-1575043694:16715..17178Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1575043694:11654..11911TCONS_00019326-exon-sc0000325-1575043694:11654..11911Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1575043694:9754..11209TCONS_00019326-exon-sc0000325-1575043694:9754..11209Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1510915933:16715..17178TCONS_00019326-exon-sc0000325-1510915933:16715..17178Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1510915933:11654..11911TCONS_00019326-exon-sc0000325-1510915933:11654..11911Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1510915933:9754..11209TCONS_00019326-exon-sc0000325-1510915933:9754..11209Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1491911889:16715..17178TCONS_00019326-exon-sc0000325-1491911889:16715..17178Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1491911889:11654..11911TCONS_00019326-exon-sc0000325-1491911889:11654..11911Clytia hemisphaericaexon
TCONS_00019326-exon-sc0000325-1491911889:9754..11209TCONS_00019326-exon-sc0000325-1491911889:9754..11209Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000325supercontigsc0000325:9754..17178 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.971732	0.549106	0.169616	0.298926	0.322365	0.550661	1.35469	0.950846	0.903383	1.96438	0.983128	0.782445	0	0	0.604431	0	0.869521	0.357328	1.12556	1.16962	0.303727	0.0888761	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
Blast
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BLAST of TCONS_00019326 vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.011e-25
Identity = 97/402 (24.13%), Postives = 191/402 (47.51%), Query Frame = 2 
Query:  839 RGRHIFDDTRGSSNSVMESFVEKLYPDRRGTIMLATWNLLPLLAGSAVFTMPFAVVIGGYFSLVFMLVMSLMADVTGVLLIDCLYEISPNSGTRKRVRKDFADIGRSV----WGRTGAFIVHSFLVVYLFLGDVLNMLLLSKSVYSLLHTCTKLSFVALSCLFSILAYPTLFIKRXXXXXXXXXXXXXXXXXXXVALIFVFIHERDSWSHNYKDIPF-LNIERFPLAAGIIMFSCISHCVLPQVEGNLMDASNSSKVIHISYITSVLINILIGIFGALTFGLKTESLVTLNASRINEIIRTIIGVSSIGYSVLNYPLNMFIICETVDKIIHDTKVEQNKKYYYA----------WVALTRLVLFASTVGLALLIPYFGILLSLRGCLIGTCLVFVFPCYFHL 1999
            RG        GS + V        +   + T   A WN+   + G  V  +P+A++ GGY  L  ++  +++   TG +LI CLYE + + G   RVR  +  I  +     +   G  +V+   ++ L +  +L +++    +Y+       +S  + S + + +  P  F+K L  ++  SLL  +      + +I   +     W+  ++ + F +++++FP++ GII+FS  S   LP +EGN+   S    +++ ++I + ++  L  +   LT+  +T+ ++T N   +   IR ++ +  +  ++L+YPL  F   E ++K +     E ++ ++ A          W    R  L   T+ +A+ +P+F +L+ L G L G  L F+ P  FHL
Sbjct:   87 RGSGAPLPPSGSKDQVGGGGEFGGHDKPKITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENED-GEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPG-LPVSQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWA--WEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDN---LPGSIRAVVNIFLVAKALLSYPLPFFAAVEVLEKSLFQ---EGSRAFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHL 478
The following BLAST results are available for this feature:
BLAST of TCONS_00019326 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VIAAT1.011e-2524.13Vesicular inhibitory amino acid transporter OS=Hom... [more]
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