TCONS_00019326-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019326-protein
Unique NameTCONS_00019326-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length643

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019326-protein ID=TCONS_00019326-protein|Name=TCONS_00019326-protein|organism=Clytia hemisphaerica|type=polypeptide|length=643bp
MKKGYDGAELWPFESSASSTGSSVRSSGRRRRSGQVNNADNKQQETNLDH
PTKEKEKTEMISGDNMKKQPITYSAFGVTISTFKDPFDSSSSPKNSTVSP
SNLSTSKGKPSTKNKHHKHRKPKKDTKPEHLYEGVDADTIPLLAGRRARS
NTSAGSSYGSSRLSFLARESGSINNLRGDGTEFHEESLNKSDFCASLFLP
SLSFQSSLPRGRHIFDDTRGSSNSVMESFVEKLYPDRRGTIMLATWNLLP
LLAGSAVFTMPFAVVIGGYFSLVFMLVMSLMADVTGVLLIDCLYEISPNS
GTRKRVRKDFADIGRSVWGRTGAFIVHSFLVVYLFLGDVLNMLLLSKSVY
SLLHTCTKLSFVALSCLFSILAYPTLFIKRLTILAYISLLSIITILFSIV
ALIFVFIHERDSWSHNYKDIPFLNIERFPLAAGIIMFSCISHCVLPQVEG
NLMDASNSSKVIHISYITSVLINILIGIFGALTFGLKTESLVTLNASRIN
EIIRTIIGVSSIGYSVLNYPLNMFIICETVDKIIHDTKVEQNKKYYYAWV
ALTRLVLFASTVGLALLIPYFGILLSLRGCLIGTCLVFVFPCYFHLKLKW
QLLSWFQKTVEISLLVIGVVLGLCALYGTITSLVYAFETGVEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010858XLOC_010858Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019326TCONS_00019326Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 238..630
e-value: 8.0E-48
score: 163.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66

Blast
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BLAST of TCONS_00019326-protein vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.511e-32
Identity = 113/442 (25.57%), Postives = 221/442 (50.00%), Query Frame = 0 
Query:  220 GSSNSVMESFVEKLYPDRRGTIMLATWNLLPLLAGSAVFTMPFAVVIGGYFSLVFMLVMSLMADVTGVLLIDCLYEISPNSGTRKRVRKDFADIGRSV----WGRTGAFIVHSFLVVYLFLGDVLNMLLLSKSVYSLLHTCTKLSFVALSCLFSILAYPTLFIKRLTILAYISLLSIIT-ILFSIVALIFVFIHERDSWSHNYKDIPF-LNIERFPLAAGIIMFSCISHCVLPQVEGNLMDASNSSKVIHISYITSVLINILIGIFGALTFGLKTESLVTLNASRINEIIRTIIGVSSIGYSVLNYPLNMFIICETVDKIIHDTKVEQNKKYYYA----------WVALTRLVLFASTVGLALLIPYFGILLSLRGCLIGTCLVFVFPCYFHLKLKWQLLSWFQKTVEISLLVIGVVLGLCALYGTITS---LVYAFETGVE 642
            GS + V        +   + T   A WN+   + G  V  +P+A++ GGY  L  ++  +++   TG +LI CLYE + + G   RVR  +  I  +     +   G  +V+   ++ L +  +L +++    +Y+       +S  + S + + +  P  F+K L  ++  SLL  +   + +I+ + +     RD W+  ++ + F +++++FP++ GII+FS  S   LP +EGN+   S    +++ ++I + ++  L  +   LT+  +T+ ++T N   +   IR ++ +  +  ++L+YPL  F   E ++K +     E ++ ++ A          W    R  L   T+ +A+ +P+F +L+ L G L G  L F+ P  FHL+L W+ L W Q   ++++ VIG   G+C++ G + S   L+ A+ T  E
Sbjct:   97 GSKDQVGGGGEFGGHDKPKITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENED-GEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPG-LPVSQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARD-WA--WEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDN---LPGSIRAVVNIFLVAKALLSYPLPFFAAVEVLEKSLFQ---EGSRAFFPACYSGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLFHLRLLWRKLLWHQVFFDVAIFVIG---GICSVSGFVHSLEGLIEAYRTNAE 524
The following BLAST results are available for this feature:
BLAST of TCONS_00019326-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VIAAT1.511e-3225.57Vesicular inhibitory amino acid transporter OS=Hom... [more]
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