XLOC_010858 (gene) - C. hemisphaerica

Overview


Name	XLOC_010858
Unique Name	XLOC_010858
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000325:9754..17178-

gene from alignment at sc0000325:9754..17178-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_010858 ID=XLOC_010858|Name=XLOC_010858|organism=Clytia hemisphaerica|type=gene|length=7425bp|location=Sequence derived from alignment at sc0000325:9754..17178- (Clytia hemisphaerica)
AGAAAATGCAACGGCAAAATAGCATTAAGTTAAGAGACACTAGCTAAAAT
AGTATCTGAAACAAAATGAGAATCAAAGATATTTGACTGTAAATCGGTAC
TCTGTAGTTGACTTGGTAATTCATTTCTGAAGTTGATAATATCTACCTAA
AAGGCTTTGACCAGAAAGTTAGATTTTGAGATTTTAAAATTCAAATTTTG
TTTAAATTGTTATGAAGAAAGGGTATGATGGAGCTGAATTATGGCCTTTT
GAGTCATCGGCTAGTAGTACTGGAAGCAGTGTCCGGTCATCTGGTCGAAG
GAGGAGAAGTGGACAAGTCAATAATGCGGACAACAAACAACAAGAGACAA
ATCTAGATCATCCTACTAAAGAGAAAGAAAAGACCGAAATGATAAGCGGA
GATAATATGAAAAAACAACCAATCACTTACTCAGCTTTTGGCGTCACCAT
ATCGACTTTTAAAGGTATCAAATCTTAAGATTCGAAAAAGTGACGGTTTT
AAATTAATGACTTTTTATTATATATTTTAAGCGCTGAGGCTTAGCTCCGA
GTCCAAGCGTTACAGTATTACTGTTTCGATATAAACGGGGAAATACTCTT
CTTTTTTTTTTTTGATATTACAACCCTTTGAAACGAACTTGGTTCAAACA
TGAGTGATCCTGAGCTTTATTGTCTTGATACCCGAGTCACTATCTCGACA
TTTAAAGGTACTTTTTATATTTCAATATACATAATTTGCTACGGTTAGTT
TTCTTTTTATGATCACCATCCTAGAATCTAGGTCTTAAGGGACCTAAGTC
GAGAACTCAAAAAAACCCTCCCACCACGGCTCTCGATCAGCCATTGAAGT
ACCAAGTTCCTCAATCTCTAGCCCTGTTTCCTGTTTCAAAACATCAATAA
ATGTGCTATACTTACTTACTCTGACGCTTTGGGCCAGTAGGACACCAAAG
TAAGATTTCTCTTCTGTGCAACCAAAGGTGCAACAAGTTCATACCACTAC
TCGGCCCTGACGCAGATCGGGACCACTCTTTTTATCGTTTTATTCCTTAA
ATTGGGGACCAATGAACATAATCGAAAGATTAAGCTTAGAAATTACCGTC
AATCAAGACAAGACAAGACATACACCTTCCCAAAAATGGGAATAGGCCCT
AACCTAAGTCAGAGATCACTGCACAATATATTACATAAACAATAATGAAA
ATAAATAACTAAAGAATAAATGACTGCTATTAAAATAAAAATCTACGAAA
TATTGTTAATCAACTTCCACCATCTCAGTCTATCAGAGGCAATCACATAC
CAATTACATTTATCAATACCAGCTTTTTTCAAACATTTAGAAATAGANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNCGCCGAAACTAAGCTCTTCAAAGTTGAAATACTCTTCCT
CGCAAAAGTCTTCATTTTCTTCTTCATCAAATTTTTTCAATGCAATTTTT
GAATTTTCATATTCAGGGATAGTTTGTCTAACAGAAAATGTATAACATGC
CATAGTTTTGTTGGTTACATCAGTCAGAAAACACATTTTAAACACGGCAA
TTATGAAAAATTCACTATGGTCAGAGCCCTTAATACAATGCCGACTCCTT
GCGAGCCACGATTACACGCATCGTTTGTTTTTTCAAGTCCGTTTGTTATT
AGTTTGAACTTGTCACAGTCAAGAGTCTCATGTCTGAATCTCCATGTTTC
CTGAAGACACATACCCCAAACATTTTTACGTAATGATAGCGAGTTGTACA
ACTCTTCGAGTCTCGAGGCAGATTTGATTCCACGTACATTCTGCGAAATG
AAGCAGATGTTCTTCATAAGCTTTTTAGCAACCATGCTTGTGAGGCTATG
GGGTGCTACGAGTGTTGATTGCCAGATCCCACCGTATCCGGTAATCCAAT
TGGATTCGCGAGGAGTACAGCCTCTTGGATTGACCACTCAGCTTGAATGT
CGATTGTCTTCACTTCATTCGTTGTTGCGTGTATAGGTGTGGTGGCTCAC
CCCCATTTAATTGAGGAGGATTTTCTTTCCACCACCACACCCTTTTGTTG
TTTTTTGATCTTTTTGATCTTTTTGATCTTTTTGATCTTACCGTCAATCT
CTTTTCATAATTTCTTCTTCTTACCTAACTCCTGAGGGCAATCGATTTTA
AAACGACCGTGTGTGTGGCCAAAATCTAGGACTATAAACCAGGCCCTTAC
AATGCAGAGAAGATTAAGCTAAATCTTATTAAAGTTTGGCGAAAAATTGA
CCCTTACGGTGTACTTTCTTGAAAGTTTTTGTCTATTTCATGGCAAAATA
GTCAGGTTTTCCAAAAAACTCCGTTTTTCTCACTTTTTACACCCTAAAGT
GCATTTCTGTTATTACGACCCTTAAAATGCACCTTTAGAAGCCTGAAAAG
GCACTCCCCTAGGTACCTGGCTTTAGAGTTTAAATCAAAGCAGTCTGTTC
AGTTTCTTCTCATGGTATGTAAGGGTTTAGTCCCGGAAAAAGTCTTACCG
AGAGTTTGAATAGCAGTACTTCTTTTATTCCTCATCAGTTAAAATCAATT
AAGATATTAAGCCCTCCAATATCTCGAAACGGTCCTACCAATAGGGGAAG
AGGAATCACTGAGCAGACAACCATTGCAACTCTTGAGATACGACCGTCGA
CTAATTTAGAAAGATTGATTATAAGTGGAGAAATCTAGTTACAAAGATCT
CCAAGCCTTTTTCTCTGAGAGTTTTCAAGATTCTTTTTCATACTTTTACT
ACCTAAATTTGCAGTCTTCAGAATAAAGTATTTCAACCGTCACAAACCTT
ATATTCCAATTTTTCAGACCCTTTCGATTCATCGTCTTCACCGAAAAATT
CAACAGTATCTCCATCGAACCTCTCAACATCCAAAGGGAAACCATCAACA
AAAAACAAACACCACAAACATAGAAAGCCAAAGAAAGATACAAAACCTGA
ACATCTCTACGAAGGAGTTGATGCAGATACCATCCCCTTATTGGCTGGTA
GAAGAGCGCGCTCTAATACAAGTGCTGGAAGCTCTTATGGATCTTCAAGA
TTGTCTTTCCTAGCTAGGGAGTCAGGTATGAATAACTTCAACAACAGAAA
AGAGCTTATGATTTAGGCTGATATTTGGTCTATTTACCCTTTCGAAACTT
AGAACATTTATTCATAATTTCACTTTTTGAGTCTGAACCCTTTTCTCTGA
GTCGTTAGCCCTTCCTTTAGCCCAACATCAAGTTACCGCACATTTAAATG
CCAGTATCCTAAAGGAAATGATTAAGTCTGTGACTGCATCCGGAGGTTAC
TTGAAAGATCCTCTTTCAATAGGGTCTATCAGAAGGTGGGGGAGGGGGCG
CCACTCTTTATCCCTGGATTGCTCCATTTCCTTTTGATTATTCTTTGTCT
TTGGTAGGATCCGCTCTGACTTTTCAATTAACACTGACTAAAGAGACTTT
TTTTGATCTCGTTTTAATAGCTTTATCTGGTCTTCTTTTTAAACACTACA
TTTTTCTTCTTTATTTAAGGGAGCATCAATAATTTACGTGGAGATGGCAC
CGAGTTTCACGAAGAATCATTGAATAAATCCGACTTCTGCGCCTCATTAT
TCCTTCCATCACTTAGTTTCCAGTCCTCTCTACCACGTGGTCGACATATA
TTTGATGATACACGTGGCTCTTCGAATTCAGTCATGGAATCGTTCGTGGA
GAAATTGTATCCGGACCGTCGAGGAACCATCATGTTAGCCACGTGGAATT
TGTTACCATTATTAGCCGGAAGTGCTGTTTTCACCATGCCGTTTGCAGTC
GTGATTGGAGGATATTTCTCGCTTGTTTTCATGCTGGTTATGAGTTTGAT
GGCTGATGTAACTGGGGTCTTATTAATTGATTGTTTATATGAAATCTCGC
CCAATAGTGGAACAAGAAAACGTGTTCGAAAAGATTTTGCTGACATTGGA
AGATCAGTGTGGGGGAGAACAGGTGCTTTTATTGTGCACTCCTTCTTGGT
AGTTTATCTCTTCTTAGGTGATGTCCTTAATATGTTGTTATTGTCTAAAA
GTGTATATTCACTGCTTCACACATGTACCAAGTTATCATTCGTTGCTTTA
TCGTGTTTATTTTCGATCTTGGCTTACCCGACCTTATTCATCAAACGACT
GACTATTCTCGCTTACATCAGCTTACTTTCAATCATTACAATTTTATTCA
GTATCGTTGCCTTAATCTTTGTTTTCATCCATGAACGCGATTCCTGGTCA
CATAACTATAAAGATATTCCGTTCCTGAATATAGAGCGTTTCCCTCTTGC
AGCAGGTATCATAATGTTTTCATGTATCTCGCACTGTGTTCTACCGCAAG
TTGAAGGGAACCTTATGGACGCTTCAAATTCATCAAAAGTTATTCATATA
TCATATATAACATCAGTTTTAATCAATATTCTTATTGGTATATTTGGTGC
ACTCACCTTTGGCTTGAAGACTGAGAGTTTGGTAACTCTAAATGCAAGCC
GTATTAATGAGATTATCAGAACAATTATTGGAGTATCATCGATAGGTTAT
TCTGTACTTAACTATCCACTGAATATGTTTATTATTTGCGAAACTGTCGA
TAAAATCATCCACGATACAAAAGTTGAGCAAAACAAGAAATATTATTATG
CCTGGGTGGCTTTGACGAGACTTGTTTTATTTGCATCGACTGTCGGTTTA
GCACTTCTTATCCCATATTTTGGAATTCTTCTTTCGCTACGAGGCTGTCT
CATTGGCACGTGCCTAGTTTTCGTATTTCCGTGTTACTTTCACTTGAAAC
TAAAATGGCAGCTGCTGTCATGGTTTCAAAAAACAGTGGAGATATCTTTA
TTGGTTATTGGAGTGGTGCTTGGATTGTGTGCTTTATATGGGACAATAAC
GAGTCTCGTCTACGCTTTTGAGACTGGCGTTGAATTGTAATTATAGCATT
TCTTTATTTTGTATGTAAAGCAAAA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00019326	TCONS_00019326	Clytia hemisphaerica	transcript
TCONS_00019325	TCONS_00019325	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00019326-protein	TCONS_00019326-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000325	supercontig	sc0000325:9754..17178 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.03	0.07	0.11	1.01	1.26	0.17	0.3	0.37	0.55	1.86	1.8	1.43	4.4	2.76	2.36	0	0	2.97	2.59	2.41	3.06	1.7	2.38	0.3	0.09	0.08	0.03

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XLOC_010858 (gene) - C. hemisphaerica