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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018490 ID=TCONS_00018490|Name=TCONS_00018490|organism=Clytia hemisphaerica|type=transcript|length=2085bp
CTCGCTAAATAACCATTTCTGACTGAGatggaaaaatttgccaaaaattt
ctgtgagacggaaatctgtatgagacggaagaactttgatcACTGAATTT
TCCCAAAGCAGAAAACTATTTCAGAAAAAGGGATGTTCGGAAATGCAAGA
GTAGACTCTTGCACTGCGCAGCTGACAGCTAAGTTAAGACCATTTATTAA
TTGACAAATTTATCACACACTGAAAAGACAATTTCACAAAACAAGACACC
ACTGCTGGATACTAAGTTAATTGTGGCTTCAACAAGTATACATCAAGACA
AGTAACCAACCAACAATGCCTTAGTATATACCAGTTGAAGTTGTGAATTG
TTGAGGAAAACaaacgtgataaaaataaattctttaaaTGTAAAAGTTTA
CCTCTCCCTTTTGATAAATCCAACGTGCTCacgtttatttcgaaagaata
aaaaaatgtgcGTGATTATTATATAAACCGTGCGTAGGAGTTTCCCGCCT
TCTTGCTACACTCCTTCATTGAGCTTCCAAATAAGGATAAAAAGCTACGG
TATCGATATCGTTGATGTAATCTTTCACccgaaaacgaaagcgaaagtcc
GTTCTGAAGTAGAGCTTACTGCTCACTGCACCCACTGCTGCACCTGACAG
TCTAAAAATATGGCGCCTTCCCAACAACAAGCAAAACGCTCAGCTCAAAC
AATAATTGGTGCTTTGGTAGCCGACGCTGCAGTCAATCCACTCCATTGGA
ATTACAACATTGAAAAGCTAGATGAACATTTAAAAGAAGCCAATGGAAGC
CCCGAATTTTCCAAATGGAATGTTTCTTTTTACGAATGTGAGGTTGGAGC
ACTTTCATGTTATGGTGATCAAGCATTCACTATGCTCAAACATCTTGTCT
CTAACAAAGGTTTTGATGTCGAAGCTTACAGTAAGTTAATATGTGAAGAT
TTTGGTCCAAACTCTGCGTACAAAGATCCAAACCCAAGTAACAGAGAAGA
TTATCCTAAAAAAGGGCCCTGGTTGAATTCTAGCGTTGGACAATCGttac
aaaatttgaaagatgGCAAGTATCAGGAAGGGGCAGATCAAAATGAATCG
GATGCACATACCAAGATCATCCCTCTTGTTGCTATGTATGCTGGAAATCC
TGACTTGAAGAAGTTTGTTGAGCAAGCTGTTCGAACGACATTGAATAATG
ACCGTGCTGTAAATGCTGCAGTTGCATACAGTGAGCTGTTGGAGAGTGTT
ATTCTGACAGGCCAGTTGGATATCAGTGCTTGGATTGGCAAGTTACCAGA
TAATCAtatcaaagaagaaatgaaTGCCGTGCTTCAAAAGAAAGATGATT
CCAACCATAGGGATGTGGTCAAAGGATTTGGGATCGCTTGTTCTTTACCG
GGAAACATGCAAGGTTCGATTCACTGTCTGCTTCAAGGAAAGGATTACGT
GGAGAGTATTCGTATGACACTGGCAGCCGGAGGCGGTAATTGCGCTCGTT
CAATGGCTGTTGCCGCTTTGTTATCTGCTCGAGATAATGTGGACGTTCCT
GAAGCGTGGATAAAACGTACCAAGCGAGGCCAAGAAGTTCTTGATTTGGC
AAAGTCTTTATCAGaactaacaaaataattttttttgaatatttttcata
ttgtacAATCTATACATTTACAAAGCAGgattttgtatgttttttttaat
tagaaaatTTGACAGAAAAAAGAAACATGAACAAACTAAAAAATTCATGG
AATTGATATCTAATCTTTGATAACCCAATTCTAGATATTTTCACCCATTT
TCGTTGATTTTGGGAAAtcctttaaaaagttttgtaaCCTTTTTGATCAT
ACTAGTAAAACATGTAATCAGTTTCcctaaaatttcaatattttacctta
ttttattttgatgattgCATTTAACATCTTTTCAGGAAGAGGGTTTCTAC
TATTTTAAAACTACCCCCTTTTATTTTAAACCACATTTTTATCCATAAAT
AGTTTAAGATCACCAGATAATTCGAGATGTTGTATATCTTAAGTGCTGGC
ATTACATTATTTTTTCTCATACCACTAGCTTGCAG Run BLAST on NCBI protein sequence of TCONS_00018490-protein >TCONS_00018490-protein ID=TCONS_00018490-protein|Name=TCONS_00018490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MAPSQQQAKRSAQTIIGALVADAAVNPLHWNYNIEKLDEHLKEANGSPEF
SKWNVSFYECEVGALSCYGDQAFTMLKHLVSNKGFDVEAYSKLICEDFGP
NSAYKDPNPSNREDYPKKGPWLNSSVGQSLQNLKDGKYQEGADQNESDAH
TKIIPLVAMYAGNPDLKKFVEQAVRTTLNNDRAVNAAVAYSELLESVILT
GQLDISAWIGKLPDNHIKEEMNAVLQKKDDSNHRDVVKGFGIACSLPGNM
QGSIHCLLQGKDYVESIRMTLAAGGGNCARSMAVAALLSARDNVDVPEAW
IKRTKRGQEVLDLAKSLSELTK Run BLAST on NCBI transcript from alignment at sc0000301:51202..63569+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018490 ID=TCONS_00018490|Name=TCONS_00018490|organism=Clytia hemisphaerica|type=transcript|length=12368bp|location=Sequence derived from alignment at sc0000301:51202..63569+ (Clytia hemisphaerica)
CTCGCTAAATAACCATTTCTGACTGAGatggaaaaatttgccaaaaattt
ctgtgagacggaaatctgtatgagacggaagaactttgatcACTGAATTT
TCCCAAAGCAGAAAACTATTTCAGAAAAAGGGATGTTCGGAAATGCAAGA
GTAGACTCTTGCACTGCGCAGCTGACAGCTAAGTTAAGACCATTTATTAA
TTGACAAATTTATCACACACTGAAAAGACAATTTCACAAAACAAGACACC
ACTGCTGGATACTAAGTTAATTGTGGCTTCAACAAGTATACATCAAGACA
AGTAACCAACCAACAATGCCTTAGTATATACCAGTTGAAGTTGTGAATTG
TTGAGGAAAACaaacgtgataaaaataaattctttaaaTGTAAAAGTTTA
CCTCTCCCTTTTGATAAATCCAACGTGCTCacgtttatttcgaaagaata
aaaaaatgtgcGTGATTATTATATAAACCGTGCGTAGGAGTTTCCCGCCT
TCTTGCTACACTCCTTCATTGAGCTTCCAAATAAGGATAAAAAGCTACGG
TATCGATATCGTTGATGTAATCTTTCACccgaaaacgaaagcgaaagtcc
GTTCTGAAGTAGAGCTTACTGCTCACTGCACCCACTGCTGCACCTGACAG
TCTAAAAATATGGCGCCTTCCCAACAACAAGCAAAACGCTCAGCTCAAAC
AATAATTGGTGCTTTGGTAGCCGACGCTGCAGGTATAAAAACTATTTCTT
TTGCAAAACTATAACTCGAATAGTAATGTTTTTTTAAAGCTtccgaaaaa
tgaaaaaaccacAGACAGTAGTGCCTATagtgggccattccagaatttgt
ctgtataAACCAGCCAGGCCAGGGGGCgaacgacacaggatttccgagga
caaaagttttcaccaaagttcgaaatttccaaggcgagagaagaaaatgt
atagATTTCCAAggtaattgaattaaaaaaggcaaaaaagagtggaattt
ccgacacattttgcaaaagtgcatggatttttatcggaatttccgatCAC
CACTggcactggaaaagaaaaattatttccgaggctagaaaaatTATGGA
TTTCATGTAACTTACACCCAAAGATCTTCGgtgtctgtattttcacttcc
tgtgaaatcgaaagagaaatcgtgtatttttaatacgcagttcattaaac
tcaaatcaaatgactgtggaggttcggtgaaatggtggtggaatgtccca
tgttgcgtaagatagtcccaagttggagcagttgacggtacattgACAaa
taatccctgagagaagtttttatagaaatctgccacaaaaacgaaagtgg
tctcttcaaCTGATTACTTCCCAGCGCaccttcgcagctgtttatcaaat
ttccaccaatgaggttgccacatttcaaacgacccttctttttggcaccc
gtggcctttcagtgccttgcacgacaggcggctgtaaaatcccacccttc
atatatttgtttcaatccgtgatccgtggcttaggttttttctcatcttc
aatttactgaagaaagcgggaatttgatacaagagttagattgtcaacaa
agtgccacaaaaaactcattgaaaaaaagaagaacttaaaatcttaaata
ttttcattttgaagaataggtgcaaaaaagtgaaacatagaaaagtttca
tttttcattgcattaaatagaaatgggggatttggaaaattttctatgtt
tgtttttttgcacaattccCTGTAACTATAGGCAAGCACCCGGTTGCTAA
GATGTTagcttgaaatcaaaagtgaaaccactgaaatCAAAAGTAAAAGC
GGTCCGTACTcgaaatcctgtaatcttgatatacaagtttatGTCTCCAT
AACCAGCCGATAATTTTAAAAaccacaaaacaaaagaaagtccgAAAAGA
TTCATTCTGACataaaaaatcttgaagtaACAGACGAAGTGATCTCAAGT
AGAATATGCTATATTTCGTATTCTATCTAATACATCATTCAGGCAAAAAG
TAAgtatatacaaagaataaaagctactatttataaaagtcatggtaaaa
aatcttaaaaaatgttatcaataaaaaggcaattaaaatgtaaaattagc
TAAGTATAAATGATCCCAAGTGACTAATGATGAAAAGAAACTGATCTTGA
GAGAaactaaacaaagaaaagaggGCTATGAAAACAAATATAACTCTCTC
GAGGCTTTCAGGCCACTATTTAAAATTggtgtaaaaaaaatatttttcac
gtgAAAATTTACTGTATTCTAatgctaatataatctagataggaaacaaa
tattaaatttgactcttttttgttcgtattttcaaatttcacaaTAAAAA
GAACTTTTTACAAATGATTTTCTTTAATGGGCATTGAATTgatattgaca
tatttaatgatgtcataatcaatgctgTGCATATTTTCATTGGCTAAAtt
taaataccactaaaatatacaagataagtaaacataaatttaccGCCCGC
GAGCACGACTAAGCTTaccgcacctctcttattcattatctaagaattga
agcagAAAAATCAGAcagacagataaaaaaattcactccattaagaatta
gtgaataagaatcAAAACCTAAAATAAAGGGTGTGGTGGTAAGCCTACAC
TAAAGAGAGGTCCACCACACCCAAGAAGAACAAANCaatgttatcaaaaa
aaggcaattaaaatgtaaaattagcTAAGTATAAATGATCCCAAGTGACT
AATGATGAAAAGAAACTGATCTTGAGAGAaactaaacaaagaaaagaggG
CTATGAAAACAAATATAACTCTCTCGAGGCTTTCAGGCCACTATTTAAAA
TTggtgtaaaaaaaatatttttcacgtgAAAATTTACTGTATTCTAatgc
taatataatctagataggaaacaaatattaaatttgactcttttttgttc
gtattttcaaatttcacaaTAAAAAGAACTTTTTACAAATGATTTTCTNA
AAGGATTGCTAAAGGTTCTTCCAAAGAAAGGAGACCTTAGTATGCCCAGG
AACTATCGTGGCATTATGCTACTTGAAACGTGTTATAAAATTGTAGCTAT
AATATTGCATGACAGGCTCCGCCCTGTTGCCGAATCCCTAGACAACGAAG
CCCAATGTGGTTTTCGATCAGGGAGAGGATGTGCGGATGGAGTTTTTACC
GTCAAAATGGCTACAAAGAAGAGAAAAGAGCACGGCCTTGAATCTTGGGT
CCTATTTTTGGATCTAGTTAAGGCATTCGATCGTGTCCCTCGTGAACTGT
TGTGGCAGGTCTTAGAAATTTTTGGCATACCTGCTAAATTGATTCGCCTT
TTAAAATCGCTACATGCTCGTGTCGAGGTGAAATTTGTTATTAATGATGT
CACAAAGTCAATTGAAAGTATTATTGGAGTCAAACAGGGGGATATTTTGG
GTCCTCTGTTGTTCATATTTTATCTTGCAGCCGTAATGATATCATGGCGT
AATGCGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTGGATTGGCGTAAAATTATTAATTCCAAGTAGCATatttttttgatagt
tttatcTAGTTACTTATTTgcataatttttccttttttcgctttttattt
TATCCACCTAGCGCTGTGATCTCTATCTTAGGATAGGGCCTATTCCCTGT
GCCAAGGGAAGGTTTATCTCTCTATCTCTATCTCTGAAGCAGAAAAATAT
TACCGCGCGAGCTGATGGCAGACAAAGGTtgtttgaagatattttcagtt
ataatccaaggtagaacaaactaaacatagaaagggtgtattttttagtg
ctctatacaatgatcggtattttttttagattctatgtttagatttttct
acccagccctgtTGCTATGTATGTGCGTCGTGTTGCTAAGacatttgctt
gaaatcgaaagtgaaaccaaaataatttagcgcatactgccgtttgcgta
atattgATAAATTGAAAGAAAGTCCTGACTGacccataaaaaaatttata
tttttatcacaTCATTTTTtgatatagcaaacatagtaagtataagcagg
CTCTGCCTTTaaaattggctgtaaaaaaattctgcaacagtagaaatttc
tccaagttagtcacactaggaaatcaaggtTTCAGAAATAACAGCAtcac
atcagtcatctacaggatgtatttgaaaCAACGAGGGTGAGAGTTACCCA
AATTTGGCTACTTATTTGGGTATCTAAAAAATTTGCATACCAGAGTGGAG
GGCTGAAAAATTGCTGTCATAGCCTGATTTTAAGCTGCCAAACCGTTACA
GAAGGAAATAAACAGTCAAGATAAGCGCAAAAAACAACTGGATATTTACG
CGTCAGGTTGCTATGACATAATTATAGAGgtttaaaatttgaacaaacat
tggttttgaaaaaaaatagaaaaggcACCTAAAGGGTTAGTTACAGCCTA
ATTGACCCCGATTCTTTAAATTAAGTCATATTTACCATGgtttctgcccc
cccccccttaaaataagggggggtcaaaaaaattgccttttaaaaaaggg
gggatttttgtcattttttttaaataagggggGATTCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATTGGCGTAA
AATTATTAATTCCAAGTAGCATatttttttgatagttttatcTAGTTACT
TATTTgcataatttttccttttttcgctttttatttTATCCACCTAGCGC
TGTGATCTCTATCTTAGGATAGGGCCTATTCCCTGTGCCAAGGGAAGGTT
TATCTCTCTATCTCTATCTCTGAAGCAGAAAAATATTACCGCGCGAGCTG
ATGGCAGACAAAGGTtgtttgaagatattttcagttataatccaaggtag
aacaaactaaacatagaaagggtgtattttttagtgctctatacaatgat
cggtattttttttagattctatgtttagatttttctacccagccctgtTG
CTATGTATGTGCGTCGTGTTGCTAAGacatttgcttgaaatcgaaagtga
aaccaaaataatttagcgcatactgccgtttgcgtaatattgATAAATTG
AAAGAAAGTCCTGACTGacccataaaaaaatttatatttttatcacaTCA
TTTTTtgatatagcaaacatagtaagtataagcaggCTCTGCCTTTaaaa
ttggctgtaaaaaaattctgcaacagtagaaatttctccaagttagtcac
actaggaaatcaaggtTTCAGAAATAACAGCAtcacatcagtcatctaca
ggatgtatttgaaaCAACGAGGGTGAGAGTTACCCAAATTTGGCTACTTA
TTTGGGTATCTAAAAAATTTGCATACCAGAGTGGAGGGCTGAAAAATTGC
TGTCATAGCCTGATTTTAAGCTGCCAAACCGTTACAGAAGGAAATAAACA
GTCAAGATAAGCGCAAAAAACAACTGGATATTTACGCGTCAGGTTGCTAT
GACATAATTATAGAGgtttaaaatttgaacaaacattggtttgaaaaaaa
atagaaaaggcACCTAAAGGGTTAGTTACAGCCTAATTGACCCCGATTCT
TTAAATTAAGTCATATTTACTCTTAAAGTTGTATTTTAGTACCCATGTAC
TCAAGTATTCCttttatttaattgcaaaaattgatACTAAATAGTaggat
ttgacgtcaaatcacagtagagctgacagttagttgatcttaaaaagcgg
ctgtatttttctttgtgtgttttagtcagagagttgttgtaatacattta
tttgctcagaatttcatactctttcagatggtaccaatcattttcgttat
tttgaaaatcagtttttttccaaacctcttattttcccttgcagtttttc
CTATGGcatcactattttggtcataaaagaTTTTCCCGGGCCTATttcgc
gtcctccctctcaaaaatatcttgtaatatactgttctttggaatagatt
AAAAATGGCTAGatcgtaaaaaagatgtcacaggaccccaggcttggccc
ccaaCTATAAACAATGCTGCTTAATGAATTGAAcaaattttaaagacatt
tgACTGAAGATGAtaatcaaaaatagtgtgacattgtaAAAAATGCTCTA
AATCAACTCTTCATATTTTTTGAGTCAGCCATAGAGATTTCACAGGGTAA
TAAACCTCAACGTGGagatatgataaaaaaaaattttgttatttgagtca
aaattgtggctgcagttcaaaaattctagttttttttaagtGTAAGCCAT
ACGATATTGAAAAGTGATCTCTGAATGGGACCTTCTAGACTTGACCTTCA
AGCCTTTCTGGCTGAATTTTCCAAATAGtgttaaatgtacatactttTGC
GTTGTTAAATGTACTTTTTTGTGGCTTTTTTGTCAGCCACATATTTTACT
CACACTTCATGCTTTAATATATTTAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAATGAGAAAaa
ttttatgttattttttaatttcaaaaattctgaaaaaatcacgaaaattt
ttgaaaaaaaattcaaaaactgataaaaatcAATAACTAATTTTAGTAGC
AATTTACTAAAAAAATGCTCAAATGTTAGTCTAGATGCCACCTATTTGGT
ACTTTAGTACCCCatggtactaaaaggattttaaattttttggggtATTG
TATTTTTGTCTGTTTACTACATATAAAATACTACTGGGGGGTTGATTTGC
AAAGTAACAGTCTGGAAATGGTGCACAGTACGATAAAAATAAGATATTGG
CGTaagtcaaagcttttcaagacAATAGGAGCACCGCCATTCTAACGCCC
AACTTGATTGCTAGGTTTGAAGCACATCCATTTTACATCCACCTCGTTTT
CTGCCTCTCCCTCAGCAGCCATATAAAAACGTATAGTGTAAATacatggc
tccgactggggtaaatagaatataaagcttattttagcaaattttTGGTG
TCAGAAGATCAAATACTTTCAGtcttaaatttcaattttggaccTGTTTA
GGGGGGGGGCTACAGTGCCCCCAAAAAACACCCTGCTTAAGTAGTCTATC
ATTTAAAAAACTTAATCTGCTTCATATTGTttggattaattttcaaaaat
tattgtaGAAAATAATCCTGTAAAAAACTTTAGCCTGTTTGTTGACCATG
CATGTGACTGAATTTGAAAACCTGAACCCTACTTGTTATTAAGCAATCTT
AACCAGGGCGTGATACGGGTGTGAATTGTAACTGTGCAATTTTGTGCTTG
CGTCCTCGAAACTGATAGATACTCTTCGAATAAAGAACGCCACAAAAAGA
TGTATATTATTGAAATGATTGATCCTCCTGaatattttcaatgtaaagTT
CAAACACAGAAgcgttttcatttatttcaataaaatttaaaacatatatt
taGACGTTTCGGTGTCATCCGACCACCATCAtcagtaaaaattgaaaata
aatatattgtGGTCGAGAATTGTTCCTGTGAGTGTGGGTAACATTAATGA
ACATTATTGATATAATCcctatgttttgttttgataagaaTAAATGCTAT
GTCTCCTTTTATTATCCCCTGATAAGATGTCAACATTGCACAACAAAAAT
GAATACTGTCACACAGCTGAGCAGTTGCACAAGGCCATGTCATTATATGA
ATGTTTTGGTCCATGACATCTGactcaaaattcaaattgtaCGTTATTAA
AATTTCTTGCCTTTCTAGTCAATCCACTCCATTGGAATTACAACATTGAA
AAGCTAGATGAACATTTAAAAGAAGCCAATGGAAGCCCCGAATTTTCCAA
ATGGAATGTTTCTTTTTACGAATGTGAGGTTGGAGCACTTTCATGTTATG
GTGATCAAGCATTCACTATGCTCAAACATCTTGTCTCTAACAAAGGTTTG
CAAATTGTTGCAAGTTCAATAAATGTATCATTTATAAATCACTTTTATCA
GCCACTTTTTAGttctattttattcatttttactttaaaaaatactCTAT
TTCCATGATTGAAGCTTGATTAAAGGATGAATAggatgtttgatttttta
ttcattgTTACACCAATTATTACTCTATAGGTTTTGATGTCGAAGCTTAC
AGTAAGTTAATATGTGAAGATTTTGGTCCAAACTCTGCGTACAAAGATCC
AAACCCAAGTAACAGAGAAGATTATCCTAAAAAAGGTatactttttaata
aatttctttttcatcaaacttTGTAAATTCGATAACATATTTTCAAGACT
TTATTTTCTGATACTTATTTTCTTTTATGCTTTTTGTTCCAACAGGGCCC
TGGTTGAATTCTAGCGTTGGACAATCGttacaaaatttgaaagatgGCAA
GTATCAGGAAGGGGCAGATCAAAATGAATCGGATGCACATACCAAGATCA
TCCCTCTTGTTGCTATGTATGCTGGAAATCCTGACTTGAAGAAGTTTGTT
GAGCAAGCTGTTCGAACGACATTGAATAATGACCGTGCTGTATGTCTTAT
TGTTCTCTTTTGACAATTTTGTCacctttacttttttttaattggaGTTG
TTTCCTCTAATATGGTTCAATTCCTAtgttttatataatattttcattct
GGTAGGTAAATGCTGCAGTTGCATACAGTGAGCTGTTGGAGAGTGTTATT
CTGACAGGCCAGTTGGATATCAGTGCTTGGATTGGCAAGTTACCAGATAA
TCAtatcaaagaagaaatgaaTGCCGTGCTTCAAAAGAAAGATGATTCCA
ACCATAGGGATGTGGTCAAAGGATTTGGGATCGCTTGTTGTAAGTGTTCT
TATCTCCCTGATTGATTTCTCAAAAAGATATGGTCAGTAGTCTACAGTTA
TTTAATGGTTTAAGTCCATTCTCATCAGGGTCACATCATAAGAAACCtgt
ttctttaacttttacGCAAAGGCGGAGATTGTTAATGTTAATCTTTCCTT
GGGTTTTTCTCTCAGGTTTGATTCCTTTTTTGTTATTCCTTATTGCTGAC
TGTCAAGTAGTGTGTACCAGCTTTATTTGGTTTGCTTGGATCACCTTACA
GCCTTACTAAATTGAGTGAGGAAAACTTCATTGGGTGACCAACCATATGA
CTTGTTTTAGATAATTATTTGATACTAACTGGGATTCCAGAAAATGCTTA
ATAGTTCTGCGATATCAAGATATTAGGCCATGATTTAAGATTTCgatagt
ttttataaaattgagcTGTTATAATTTAGCATTCTGTTATCAATCTGGAT
AGTTCTTTTGTAGTGCCTGTTATCCAATGAGTTTACGTTACGTAGCAGGT
TAGAATGAATGAAAAGCATAAATAGTCTAAAACAATAGATGTCAATCAGG
AAGAGGTTAGAGTTGTATGGATGGTTACGCTCAAAGAAACAAgaacaaag
aagattttcaaaatacaGTCGTCGATTAGATTAAATTGCTTTTAATTAGA
CGGACATTATCAATCCATTTTTAAGCTTTACCGGGAAACATGCAAGGTTC
GATTCACTGTCTGCTTCAAGGAAAGGATTACGTGGAGAGTATTCGTATGA
CACTGGCAGCCGGAGGCGGTAATTGCGCTCGTTCAATGGCTGTTGCCGCT
TTGTTATCTGCTCGAGATAATGTGGACGTTCCTGAAGCGTGGATAAAACG
TACCAAGCGAGGCCAAGAAGTTCTTGATTTGGCAAAGTCTTTATCAGaac
taacaaaataattttttttgaatatttttcatattgtacAATCTATACAT
TTACAAAGCAGgattttgtatgttttttttaattagaaaatTTGACAGAA
AAAAGAAACATGAACAAACTAAAAAATTCATGGAATTGATATCTAATCTT
TGATAACCCAATTCTAGATATTTTCACCCATTTTCGTTGATTTTGGGAAA
tcctttaaaaagttttgtaaCCTTTTTGATCATACTAGTAAAACATGTAA
TCAGTTTCcctaaaatttcaatattttaccttattttattttgatgattg
CATTTAACATCTTTTCAGGAAGAGGGTTTCTACTATTTTAAAACTACCCC
CTTTTATTTTAAACCACATTTTTATCCATAAATAGTTTAAGATCACCAGA
TAATTCGAGATGTTGTATATCTTAAGTGCTGGCATTACATTATTTTTTCT
CATACCACTAGCTTGCAG Coding sequence (CDS) from alignment at sc0000301:51202..63569+ >TCONS_00018490 ID=TCONS_00018490|Name=TCONS_00018490|organism=Clytia hemisphaerica|type=CDS|length=5814bp|location=Sequence derived from alignment at sc0000301:51202..63569+ (Clytia hemisphaerica)
ATGGCGCCTTCCCAACAACAAGCAAAACGCTCAGCTCAAACAATAATTGG
TGCTTTGGTAGCCGACGCTGCAGTCAATCCACTCCATTGGAATTACAACA
TTGAAAAGCTAGATGAACATTTAAAAGAAGCCAATGGAAGCCCCGAATTT
TCCAAATGGAATGTTTCTTTTTACGAATGTGAGGTTGGAGCACTTTCATG
TTATGGTGATCAAGCATTCACTATGCTCAAACATCTTGTCTCTAACAAAG
GTTTTGATGTCGAAGCTTACAGTAAGTTAATATGTGAAGATTTTGGTCCA
AACTCTGCGTACAAAGATCCAAACCCAAGTAACAGAGAAGATTATCCTAA
AAAAGGGCCCTGGTTGAATTCTAGCGTTGGACAATCGttacaaaatttga
aagatgGCAAGTATCAGGAAGGGGCAGATCAAAATGAATCGGATGCACAT
ACCAAGATCATCCCTCTTGTTGCTATGTATGCTGGAAATCCTGACTTGAA
GAAGTTTGTTGAGCAAGCTGTTCGAACGACATTGAATAATGACCGTGCTG
TAAATGCTGCAGTTGCATACAGTGAGCTGTTGGAGAGTGTTATTCTGACA
GGCCAGTTGGATATCAGTGCTTGGATTGGCAAGTTACCAGATAATCAtat
caaagaagaaatgaaTGCCGTGCTTCAAAAGAAAGATGATTCCAACCATA
GGGATGTGGTCAAAGGATTTGGGATCGCTTGTTCTTTACCGGGAAACATG
CAAGGTTCGATTCACTGTCTGCTTCAAGGAAAGGATTACGTGGAGAGTAT
TCGTATGACACTGGCAGCCGGAGGCGGTAATTGCGCTCGTTCAATGGCTG
TTGCCGCTTTGTTATCTGCTCGAGATAATGTGGACGTTCCTGAAGCGTGG
ATAAAACGTACCAAGCGAGGCCAAGAAGTTCTTGATTTGGCAAAGTCTTT
ATCAGaactaacaaaataaATGGCGCCTTCCCAACAACAAGCAAAACGCT
CAGCTCAAACAATAATTGGTGCTTTGGTAGCCGACGCTGCAGTCAATCCA
CTCCATTGGAATTACAACATTGAAAAGCTAGATGAACATTTAAAAGAAGC
CAATGGAAGCCCCGAATTTTCCAAATGGAATGTTTCTTTTTACGAATGTG
AGGTTGGAGCACTTTCATGTTATGGTGATCAAGCATTCACTATGCTCAAA
CATCTTGTCTCTAACAAAGGTTTTGATGTCGAAGCTTACAGTAAGTTAAT
ATGTGAAGATTTTGGTCCAAACTCTGCGTACAAAGATCCAAACCCAAGTA
ACAGAGAAGATTATCCTAAAAAAGGGCCCTGGTTGAATTCTAGCGTTGGA
CAATCGttacaaaatttgaaagatgGCAAGTATCAGGAAGGGGCAGATCA
AAATGAATCGGATGCACATACCAAGATCATCCCTCTTGTTGCTATGTATG
CTGGAAATCCTGACTTGAAGAAGTTTGTTGAGCAAGCTGTTCGAACGACA
TTGAATAATGACCGTGCTGTAAATGCTGCAGTTGCATACAGTGAGCTGTT
GGAGAGTGTTATTCTGACAGGCCAGTTGGATATCAGTGCTTGGATTGGCA
AGTTACCAGATAATCAtatcaaagaagaaatgaaTGCCGTGCTTCAAAAG
AAAGATGATTCCAACCATAGGGATGTGGTCAAAGGATTTGGGATCGCTTG
TTCTTTACCGGGAAACATGCAAGGTTCGATTCACTGTCTGCTTCAAGGAA
AGGATTACGTGGAGAGTATTCGTATGACACTGGCAGCCGGAGGCGGTAAT
TGCGCTCGTTCAATGGCTGTTGCCGCTTTGTTATCTGCTCGAGATAATGT
GGACGTTCCTGAAGCGTGGATAAAACGTACCAAGCGAGGCCAAGAAGTTC
TTGATTTGGCAAAGTCTTTATCAGaactaacaaaataaATGGCGCCTTCC
CAACAACAAGCAAAACGCTCAGCTCAAACAATAATTGGTGCTTTGGTAGC
CGACGCTGCAGTCAATCCACTCCATTGGAATTACAACATTGAAAAGCTAG
ATGAACATTTAAAAGAAGCCAATGGAAGCCCCGAATTTTCCAAATGGAAT
GTTTCTTTTTACGAATGTGAGGTTGGAGCACTTTCATGTTATGGTGATCA
AGCATTCACTATGCTCAAACATCTTGTCTCTAACAAAGGTTTTGATGTCG
AAGCTTACAGTAAGTTAATATGTGAAGATTTTGGTCCAAACTCTGCGTAC
AAAGATCCAAACCCAAGTAACAGAGAAGATTATCCTAAAAAAGGGCCCTG
GTTGAATTCTAGCGTTGGACAATCGttacaaaatttgaaagatgGCAAGT
ATCAGGAAGGGGCAGATCAAAATGAATCGGATGCACATACCAAGATCATC
CCTCTTGTTGCTATGTATGCTGGAAATCCTGACTTGAAGAAGTTTGTTGA
GCAAGCTGTTCGAACGACATTGAATAATGACCGTGCTGTAAATGCTGCAG
TTGCATACAGTGAGCTGTTGGAGAGTGTTATTCTGACAGGCCAGTTGGAT
ATCAGTGCTTGGATTGGCAAGTTACCAGATAATCAtatcaaagaagaaat
gaaTGCCGTGCTTCAAAAGAAAGATGATTCCAACCATAGGGATGTGGTCA
AAGGATTTGGGATCGCTTGTTCTTTACCGGGAAACATGCAAGGTTCGATT
CACTGTCTGCTTCAAGGAAAGGATTACGTGGAGAGTATTCGTATGACACT
GGCAGCCGGAGGCGGTAATTGCGCTCGTTCAATGGCTGTTGCCGCTTTGT
TATCTGCTCGAGATAATGTGGACGTTCCTGAAGCGTGGATAAAACGTACC
AAGCGAGGCCAAGAAGTTCTTGATTTGGCAAAGTCTTTATCAGaactaac
aaaataaATGGCGCCTTCCCAACAACAAGCAAAACGCTCAGCTCAAACAA
TAATTGGTGCTTTGGTAGCCGACGCTGCAGTCAATCCACTCCATTGGAAT
TACAACATTGAAAAGCTAGATGAACATTTAAAAGAAGCCAATGGAAGCCC
CGAATTTTCCAAATGGAATGTTTCTTTTTACGAATGTGAGGTTGGAGCAC
TTTCATGTTATGGTGATCAAGCATTCACTATGCTCAAACATCTTGTCTCT
AACAAAGGTTTTGATGTCGAAGCTTACAGTAAGTTAATATGTGAAGATTT
TGGTCCAAACTCTGCGTACAAAGATCCAAACCCAAGTAACAGAGAAGATT
ATCCTAAAAAAGGGCCCTGGTTGAATTCTAGCGTTGGACAATCGttacaa
aatttgaaagatgGCAAGTATCAGGAAGGGGCAGATCAAAATGAATCGGA
TGCACATACCAAGATCATCCCTCTTGTTGCTATGTATGCTGGAAATCCTG
ACTTGAAGAAGTTTGTTGAGCAAGCTGTTCGAACGACATTGAATAATGAC
CGTGCTGTAAATGCTGCAGTTGCATACAGTGAGCTGTTGGAGAGTGTTAT
TCTGACAGGCCAGTTGGATATCAGTGCTTGGATTGGCAAGTTACCAGATA
ATCAtatcaaagaagaaatgaaTGCCGTGCTTCAAAAGAAAGATGATTCC
AACCATAGGGATGTGGTCAAAGGATTTGGGATCGCTTGTTCTTTACCGGG
AAACATGCAAGGTTCGATTCACTGTCTGCTTCAAGGAAAGGATTACGTGG
AGAGTATTCGTATGACACTGGCAGCCGGAGGCGGTAATTGCGCTCGTTCA
ATGGCTGTTGCCGCTTTGTTATCTGCTCGAGATAATGTGGACGTTCCTGA
AGCGTGGATAAAACGTACCAAGCGAGGCCAAGAAGTTCTTGATTTGGCAA
AGTCTTTATCAGaactaacaaaataaATGGCGCCTTCCCAACAACAAGCA
AAACGCTCAGCTCAAACAATAATTGGTGCTTTGGTAGCCGACGCTGCAGT
CAATCCACTCCATTGGAATTACAACATTGAAAAGCTAGATGAACATTTAA
AAGAAGCCAATGGAAGCCCCGAATTTTCCAAATGGAATGTTTCTTTTTAC
GAATGTGAGGTTGGAGCACTTTCATGTTATGGTGATCAAGCATTCACTAT
GCTCAAACATCTTGTCTCTAACAAAGGTTTTGATGTCGAAGCTTACAGTA
AGTTAATATGTGAAGATTTTGGTCCAAACTCTGCGTACAAAGATCCAAAC
CCAAGTAACAGAGAAGATTATCCTAAAAAAGGGCCCTGGTTGAATTCTAG
CGTTGGACAATCGttacaaaatttgaaagatgGCAAGTATCAGGAAGGGG
CAGATCAAAATGAATCGGATGCACATACCAAGATCATCCCTCTTGTTGCT
ATGTATGCTGGAAATCCTGACTTGAAGAAGTTTGTTGAGCAAGCTGTTCG
AACGACATTGAATAATGACCGTGCTGTAAATGCTGCAGTTGCATACAGTG
AGCTGTTGGAGAGTGTTATTCTGACAGGCCAGTTGGATATCAGTGCTTGG
ATTGGCAAGTTACCAGATAATCAtatcaaagaagaaatgaaTGCCGTGCT
TCAAAAGAAAGATGATTCCAACCATAGGGATGTGGTCAAAGGATTTGGGA
TCGCTTGTTCTTTACCGGGAAACATGCAAGGTTCGATTCACTGTCTGCTT
CAAGGAAAGGATTACGTGGAGAGTATTCGTATGACACTGGCAGCCGGAGG
CGGTAATTGCGCTCGTTCAATGGCTGTTGCCGCTTTGTTATCTGCTCGAG
ATAATGTGGACGTTCCTGAAGCGTGGATAAAACGTACCAAGCGAGGCCAA
GAAGTTCTTGATTTGGCAAAGTCTTTATCAGaactaacaaaataaATGGC
GCCTTCCCAACAACAAGCAAAACGCTCAGCTCAAACAATAATTGGTGCTT
TGGTAGCCGACGCTGCAGTCAATCCACTCCATTGGAATTACAACATTGAA
AAGCTAGATGAACATTTAAAAGAAGCCAATGGAAGCCCCGAATTTTCCAA
ATGGAATGTTTCTTTTTACGAATGTGAGGTTGGAGCACTTTCATGTTATG
GTGATCAAGCATTCACTATGCTCAAACATCTTGTCTCTAACAAAGGTTTT
GATGTCGAAGCTTACAGTAAGTTAATATGTGAAGATTTTGGTCCAAACTC
TGCGTACAAAGATCCAAACCCAAGTAACAGAGAAGATTATCCTAAAAAAG
GGCCCTGGTTGAATTCTAGCGTTGGACAATCGttacaaaatttgaaagat
gGCAAGTATCAGGAAGGGGCAGATCAAAATGAATCGGATGCACATACCAA
GATCATCCCTCTTGTTGCTATGTATGCTGGAAATCCTGACTTGAAGAAGT
TTGTTGAGCAAGCTGTTCGAACGACATTGAATAATGACCGTGCTGTAAAT
GCTGCAGTTGCATACAGTGAGCTGTTGGAGAGTGTTATTCTGACAGGCCA
GTTGGATATCAGTGCTTGGATTGGCAAGTTACCAGATAATCAtatcaaag
aagaaatgaaTGCCGTGCTTCAAAAGAAAGATGATTCCAACCATAGGGAT
GTGGTCAAAGGATTTGGGATCGCTTGTTCTTTACCGGGAAACATGCAAGG
TTCGATTCACTGTCTGCTTCAAGGAAAGGATTACGTGGAGAGTATTCGTA
TGACACTGGCAGCCGGAGGCGGTAATTGCGCTCGTTCAATGGCTGTTGCC
GCTTTGTTATCTGCTCGAGATAATGTGGACGTTCCTGAAGCGTGGATAAA
ACGTACCAAGCGAGGCCAAGAAGTTCTTGATTTGGCAAAGTCTTTATCAG
aactaacaaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018490-exon-sc0000301-1491911889:51202..51933 | TCONS_00018490-exon-sc0000301-1491911889:51202..51933 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1510915933:51202..51933 | TCONS_00018490-exon-sc0000301-1510915933:51202..51933 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1575043694:51202..51933 | TCONS_00018490-exon-sc0000301-1575043694:51202..51933 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1491911889:61120..61296 | TCONS_00018490-exon-sc0000301-1491911889:61120..61296 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1510915933:61120..61296 | TCONS_00018490-exon-sc0000301-1510915933:61120..61296 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1575043694:61120..61296 | TCONS_00018490-exon-sc0000301-1575043694:61120..61296 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1491911889:61482..61586 | TCONS_00018490-exon-sc0000301-1491911889:61482..61586 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1510915933:61482..61586 | TCONS_00018490-exon-sc0000301-1510915933:61482..61586 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1575043694:61482..61586 | TCONS_00018490-exon-sc0000301-1575043694:61482..61586 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1491911889:61697..61890 | TCONS_00018490-exon-sc0000301-1491911889:61697..61890 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1510915933:61697..61890 | TCONS_00018490-exon-sc0000301-1510915933:61697..61890 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1575043694:61697..61890 | TCONS_00018490-exon-sc0000301-1575043694:61697..61890 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1491911889:62007..62190 | TCONS_00018490-exon-sc0000301-1491911889:62007..62190 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1510915933:62007..62190 | TCONS_00018490-exon-sc0000301-1510915933:62007..62190 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1575043694:62007..62190 | TCONS_00018490-exon-sc0000301-1575043694:62007..62190 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1491911889:62877..63569 | TCONS_00018490-exon-sc0000301-1491911889:62877..63569 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1510915933:62877..63569 | TCONS_00018490-exon-sc0000301-1510915933:62877..63569 | Clytia hemisphaerica | exon |
| TCONS_00018490-exon-sc0000301-1575043694:62877..63569 | TCONS_00018490-exon-sc0000301-1575043694:62877..63569 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:51202..63569 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005502 | Ribosyl_crysJ1 |
Blast
The following BLAST results are available for this feature:
|
