XLOC_010366 (gene) - C. hemisphaerica

Overview


Name	XLOC_010366
Unique Name	XLOC_010366
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000301:51202..63569+

gene from alignment at sc0000301:51202..63569+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_010366 ID=XLOC_010366|Name=XLOC_010366|organism=Clytia hemisphaerica|type=gene|length=12368bp|location=Sequence derived from alignment at sc0000301:51202..63569+ (Clytia hemisphaerica)
CTCGCTAAATAACCATTTCTGACTGAGatggaaaaatttgccaaaaattt
ctgtgagacggaaatctgtatgagacggaagaactttgatcACTGAATTT
TCCCAAAGCAGAAAACTATTTCAGAAAAAGGGATGTTCGGAAATGCAAGA
GTAGACTCTTGCACTGCGCAGCTGACAGCTAAGTTAAGACCATTTATTAA
TTGACAAATTTATCACACACTGAAAAGACAATTTCACAAAACAAGACACC
ACTGCTGGATACTAAGTTAATTGTGGCTTCAACAAGTATACATCAAGACA
AGTAACCAACCAACAATGCCTTAGTATATACCAGTTGAAGTTGTGAATTG
TTGAGGAAAACaaacgtgataaaaataaattctttaaaTGTAAAAGTTTA
CCTCTCCCTTTTGATAAATCCAACGTGCTCacgtttatttcgaaagaata
aaaaaatgtgcGTGATTATTATATAAACCGTGCGTAGGAGTTTCCCGCCT
TCTTGCTACACTCCTTCATTGAGCTTCCAAATAAGGATAAAAAGCTACGG
TATCGATATCGTTGATGTAATCTTTCACccgaaaacgaaagcgaaagtcc
GTTCTGAAGTAGAGCTTACTGCTCACTGCACCCACTGCTGCACCTGACAG
TCTAAAAATATGGCGCCTTCCCAACAACAAGCAAAACGCTCAGCTCAAAC
AATAATTGGTGCTTTGGTAGCCGACGCTGCAGGTATAAAAACTATTTCTT
TTGCAAAACTATAACTCGAATAGTAATGTTTTTTTAAAGCTtccgaaaaa
tgaaaaaaccacAGACAGTAGTGCCTATagtgggccattccagaatttgt
ctgtataAACCAGCCAGGCCAGGGGGCgaacgacacaggatttccgagga
caaaagttttcaccaaagttcgaaatttccaaggcgagagaagaaaatgt
atagATTTCCAAggtaattgaattaaaaaaggcaaaaaagagtggaattt
ccgacacattttgcaaaagtgcatggatttttatcggaatttccgatCAC
CACTggcactggaaaagaaaaattatttccgaggctagaaaaatTATGGA
TTTCATGTAACTTACACCCAAAGATCTTCGgtgtctgtattttcacttcc
tgtgaaatcgaaagagaaatcgtgtatttttaatacgcagttcattaaac
tcaaatcaaatgactgtggaggttcggtgaaatggtggtggaatgtccca
tgttgcgtaagatagtcccaagttggagcagttgacggtacattgACAaa
taatccctgagagaagtttttatagaaatctgccacaaaaacgaaagtgg
tctcttcaaCTGATTACTTCCCAGCGCaccttcgcagctgtttatcaaat
ttccaccaatgaggttgccacatttcaaacgacccttctttttggcaccc
gtggcctttcagtgccttgcacgacaggcggctgtaaaatcccacccttc
atatatttgtttcaatccgtgatccgtggcttaggttttttctcatcttc
aatttactgaagaaagcgggaatttgatacaagagttagattgtcaacaa
agtgccacaaaaaactcattgaaaaaaagaagaacttaaaatcttaaata
ttttcattttgaagaataggtgcaaaaaagtgaaacatagaaaagtttca
tttttcattgcattaaatagaaatgggggatttggaaaattttctatgtt
tgtttttttgcacaattccCTGTAACTATAGGCAAGCACCCGGTTGCTAA
GATGTTagcttgaaatcaaaagtgaaaccactgaaatCAAAAGTAAAAGC
GGTCCGTACTcgaaatcctgtaatcttgatatacaagtttatGTCTCCAT
AACCAGCCGATAATTTTAAAAaccacaaaacaaaagaaagtccgAAAAGA
TTCATTCTGACataaaaaatcttgaagtaACAGACGAAGTGATCTCAAGT
AGAATATGCTATATTTCGTATTCTATCTAATACATCATTCAGGCAAAAAG
TAAgtatatacaaagaataaaagctactatttataaaagtcatggtaaaa
aatcttaaaaaatgttatcaataaaaaggcaattaaaatgtaaaattagc
TAAGTATAAATGATCCCAAGTGACTAATGATGAAAAGAAACTGATCTTGA
GAGAaactaaacaaagaaaagaggGCTATGAAAACAAATATAACTCTCTC
GAGGCTTTCAGGCCACTATTTAAAATTggtgtaaaaaaaatatttttcac
gtgAAAATTTACTGTATTCTAatgctaatataatctagataggaaacaaa
tattaaatttgactcttttttgttcgtattttcaaatttcacaaTAAAAA
GAACTTTTTACAAATGATTTTCTTTAATGGGCATTGAATTgatattgaca
tatttaatgatgtcataatcaatgctgTGCATATTTTCATTGGCTAAAtt
taaataccactaaaatatacaagataagtaaacataaatttaccGCCCGC
GAGCACGACTAAGCTTaccgcacctctcttattcattatctaagaattga
agcagAAAAATCAGAcagacagataaaaaaattcactccattaagaatta
gtgaataagaatcAAAACCTAAAATAAAGGGTGTGGTGGTAAGCCTACAC
TAAAGAGAGGTCCACCACACCCAAGAAGAACAAANCaatgttatcaaaaa
aaggcaattaaaatgtaaaattagcTAAGTATAAATGATCCCAAGTGACT
AATGATGAAAAGAAACTGATCTTGAGAGAaactaaacaaagaaaagaggG
CTATGAAAACAAATATAACTCTCTCGAGGCTTTCAGGCCACTATTTAAAA
TTggtgtaaaaaaaatatttttcacgtgAAAATTTACTGTATTCTAatgc
taatataatctagataggaaacaaatattaaatttgactcttttttgttc
gtattttcaaatttcacaaTAAAAAGAACTTTTTACAAATGATTTTCTNA
AAGGATTGCTAAAGGTTCTTCCAAAGAAAGGAGACCTTAGTATGCCCAGG
AACTATCGTGGCATTATGCTACTTGAAACGTGTTATAAAATTGTAGCTAT
AATATTGCATGACAGGCTCCGCCCTGTTGCCGAATCCCTAGACAACGAAG
CCCAATGTGGTTTTCGATCAGGGAGAGGATGTGCGGATGGAGTTTTTACC
GTCAAAATGGCTACAAAGAAGAGAAAAGAGCACGGCCTTGAATCTTGGGT
CCTATTTTTGGATCTAGTTAAGGCATTCGATCGTGTCCCTCGTGAACTGT
TGTGGCAGGTCTTAGAAATTTTTGGCATACCTGCTAAATTGATTCGCCTT
TTAAAATCGCTACATGCTCGTGTCGAGGTGAAATTTGTTATTAATGATGT
CACAAAGTCAATTGAAAGTATTATTGGAGTCAAACAGGGGGATATTTTGG
GTCCTCTGTTGTTCATATTTTATCTTGCAGCCGTAATGATATCATGGCGT
AATGCGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTGGATTGGCGTAAAATTATTAATTCCAAGTAGCATatttttttgatagt
tttatcTAGTTACTTATTTgcataatttttccttttttcgctttttattt
TATCCACCTAGCGCTGTGATCTCTATCTTAGGATAGGGCCTATTCCCTGT
GCCAAGGGAAGGTTTATCTCTCTATCTCTATCTCTGAAGCAGAAAAATAT
TACCGCGCGAGCTGATGGCAGACAAAGGTtgtttgaagatattttcagtt
ataatccaaggtagaacaaactaaacatagaaagggtgtattttttagtg
ctctatacaatgatcggtattttttttagattctatgtttagatttttct
acccagccctgtTGCTATGTATGTGCGTCGTGTTGCTAAGacatttgctt
gaaatcgaaagtgaaaccaaaataatttagcgcatactgccgtttgcgta
atattgATAAATTGAAAGAAAGTCCTGACTGacccataaaaaaatttata
tttttatcacaTCATTTTTtgatatagcaaacatagtaagtataagcagg
CTCTGCCTTTaaaattggctgtaaaaaaattctgcaacagtagaaatttc
tccaagttagtcacactaggaaatcaaggtTTCAGAAATAACAGCAtcac
atcagtcatctacaggatgtatttgaaaCAACGAGGGTGAGAGTTACCCA
AATTTGGCTACTTATTTGGGTATCTAAAAAATTTGCATACCAGAGTGGAG
GGCTGAAAAATTGCTGTCATAGCCTGATTTTAAGCTGCCAAACCGTTACA
GAAGGAAATAAACAGTCAAGATAAGCGCAAAAAACAACTGGATATTTACG
CGTCAGGTTGCTATGACATAATTATAGAGgtttaaaatttgaacaaacat
tggttttgaaaaaaaatagaaaaggcACCTAAAGGGTTAGTTACAGCCTA
ATTGACCCCGATTCTTTAAATTAAGTCATATTTACCATGgtttctgcccc
cccccccttaaaataagggggggtcaaaaaaattgccttttaaaaaaggg
gggatttttgtcattttttttaaataagggggGATTCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATTGGCGTAA
AATTATTAATTCCAAGTAGCATatttttttgatagttttatcTAGTTACT
TATTTgcataatttttccttttttcgctttttatttTATCCACCTAGCGC
TGTGATCTCTATCTTAGGATAGGGCCTATTCCCTGTGCCAAGGGAAGGTT
TATCTCTCTATCTCTATCTCTGAAGCAGAAAAATATTACCGCGCGAGCTG
ATGGCAGACAAAGGTtgtttgaagatattttcagttataatccaaggtag
aacaaactaaacatagaaagggtgtattttttagtgctctatacaatgat
cggtattttttttagattctatgtttagatttttctacccagccctgtTG
CTATGTATGTGCGTCGTGTTGCTAAGacatttgcttgaaatcgaaagtga
aaccaaaataatttagcgcatactgccgtttgcgtaatattgATAAATTG
AAAGAAAGTCCTGACTGacccataaaaaaatttatatttttatcacaTCA
TTTTTtgatatagcaaacatagtaagtataagcaggCTCTGCCTTTaaaa
ttggctgtaaaaaaattctgcaacagtagaaatttctccaagttagtcac
actaggaaatcaaggtTTCAGAAATAACAGCAtcacatcagtcatctaca
ggatgtatttgaaaCAACGAGGGTGAGAGTTACCCAAATTTGGCTACTTA
TTTGGGTATCTAAAAAATTTGCATACCAGAGTGGAGGGCTGAAAAATTGC
TGTCATAGCCTGATTTTAAGCTGCCAAACCGTTACAGAAGGAAATAAACA
GTCAAGATAAGCGCAAAAAACAACTGGATATTTACGCGTCAGGTTGCTAT
GACATAATTATAGAGgtttaaaatttgaacaaacattggtttgaaaaaaa
atagaaaaggcACCTAAAGGGTTAGTTACAGCCTAATTGACCCCGATTCT
TTAAATTAAGTCATATTTACTCTTAAAGTTGTATTTTAGTACCCATGTAC
TCAAGTATTCCttttatttaattgcaaaaattgatACTAAATAGTaggat
ttgacgtcaaatcacagtagagctgacagttagttgatcttaaaaagcgg
ctgtatttttctttgtgtgttttagtcagagagttgttgtaatacattta
tttgctcagaatttcatactctttcagatggtaccaatcattttcgttat
tttgaaaatcagtttttttccaaacctcttattttcccttgcagtttttc
CTATGGcatcactattttggtcataaaagaTTTTCCCGGGCCTATttcgc
gtcctccctctcaaaaatatcttgtaatatactgttctttggaatagatt
AAAAATGGCTAGatcgtaaaaaagatgtcacaggaccccaggcttggccc
ccaaCTATAAACAATGCTGCTTAATGAATTGAAcaaattttaaagacatt
tgACTGAAGATGAtaatcaaaaatagtgtgacattgtaAAAAATGCTCTA
AATCAACTCTTCATATTTTTTGAGTCAGCCATAGAGATTTCACAGGGTAA
TAAACCTCAACGTGGagatatgataaaaaaaaattttgttatttgagtca
aaattgtggctgcagttcaaaaattctagttttttttaagtGTAAGCCAT
ACGATATTGAAAAGTGATCTCTGAATGGGACCTTCTAGACTTGACCTTCA
AGCCTTTCTGGCTGAATTTTCCAAATAGtgttaaatgtacatactttTGC
GTTGTTAAATGTACTTTTTTGTGGCTTTTTTGTCAGCCACATATTTTACT
CACACTTCATGCTTTAATATATTTAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAATGAGAAAaa
ttttatgttattttttaatttcaaaaattctgaaaaaatcacgaaaattt
ttgaaaaaaaattcaaaaactgataaaaatcAATAACTAATTTTAGTAGC
AATTTACTAAAAAAATGCTCAAATGTTAGTCTAGATGCCACCTATTTGGT
ACTTTAGTACCCCatggtactaaaaggattttaaattttttggggtATTG
TATTTTTGTCTGTTTACTACATATAAAATACTACTGGGGGGTTGATTTGC
AAAGTAACAGTCTGGAAATGGTGCACAGTACGATAAAAATAAGATATTGG
CGTaagtcaaagcttttcaagacAATAGGAGCACCGCCATTCTAACGCCC
AACTTGATTGCTAGGTTTGAAGCACATCCATTTTACATCCACCTCGTTTT
CTGCCTCTCCCTCAGCAGCCATATAAAAACGTATAGTGTAAATacatggc
tccgactggggtaaatagaatataaagcttattttagcaaattttTGGTG
TCAGAAGATCAAATACTTTCAGtcttaaatttcaattttggaccTGTTTA
GGGGGGGGGCTACAGTGCCCCCAAAAAACACCCTGCTTAAGTAGTCTATC
ATTTAAAAAACTTAATCTGCTTCATATTGTttggattaattttcaaaaat
tattgtaGAAAATAATCCTGTAAAAAACTTTAGCCTGTTTGTTGACCATG
CATGTGACTGAATTTGAAAACCTGAACCCTACTTGTTATTAAGCAATCTT
AACCAGGGCGTGATACGGGTGTGAATTGTAACTGTGCAATTTTGTGCTTG
CGTCCTCGAAACTGATAGATACTCTTCGAATAAAGAACGCCACAAAAAGA
TGTATATTATTGAAATGATTGATCCTCCTGaatattttcaatgtaaagTT
CAAACACAGAAgcgttttcatttatttcaataaaatttaaaacatatatt
taGACGTTTCGGTGTCATCCGACCACCATCAtcagtaaaaattgaaaata
aatatattgtGGTCGAGAATTGTTCCTGTGAGTGTGGGTAACATTAATGA
ACATTATTGATATAATCcctatgttttgttttgataagaaTAAATGCTAT
GTCTCCTTTTATTATCCCCTGATAAGATGTCAACATTGCACAACAAAAAT
GAATACTGTCACACAGCTGAGCAGTTGCACAAGGCCATGTCATTATATGA
ATGTTTTGGTCCATGACATCTGactcaaaattcaaattgtaCGTTATTAA
AATTTCTTGCCTTTCTAGTCAATCCACTCCATTGGAATTACAACATTGAA
AAGCTAGATGAACATTTAAAAGAAGCCAATGGAAGCCCCGAATTTTCCAA
ATGGAATGTTTCTTTTTACGAATGTGAGGTTGGAGCACTTTCATGTTATG
GTGATCAAGCATTCACTATGCTCAAACATCTTGTCTCTAACAAAGGTTTG
CAAATTGTTGCAAGTTCAATAAATGTATCATTTATAAATCACTTTTATCA
GCCACTTTTTAGttctattttattcatttttactttaaaaaatactCTAT
TTCCATGATTGAAGCTTGATTAAAGGATGAATAggatgtttgatttttta
ttcattgTTACACCAATTATTACTCTATAGGTTTTGATGTCGAAGCTTAC
AGTAAGTTAATATGTGAAGATTTTGGTCCAAACTCTGCGTACAAAGATCC
AAACCCAAGTAACAGAGAAGATTATCCTAAAAAAGGTatactttttaata
aatttctttttcatcaaacttTGTAAATTCGATAACATATTTTCAAGACT
TTATTTTCTGATACTTATTTTCTTTTATGCTTTTTGTTCCAACAGGGCCC
TGGTTGAATTCTAGCGTTGGACAATCGttacaaaatttgaaagatgGCAA
GTATCAGGAAGGGGCAGATCAAAATGAATCGGATGCACATACCAAGATCA
TCCCTCTTGTTGCTATGTATGCTGGAAATCCTGACTTGAAGAAGTTTGTT
GAGCAAGCTGTTCGAACGACATTGAATAATGACCGTGCTGTATGTCTTAT
TGTTCTCTTTTGACAATTTTGTCacctttacttttttttaattggaGTTG
TTTCCTCTAATATGGTTCAATTCCTAtgttttatataatattttcattct
GGTAGGTAAATGCTGCAGTTGCATACAGTGAGCTGTTGGAGAGTGTTATT
CTGACAGGCCAGTTGGATATCAGTGCTTGGATTGGCAAGTTACCAGATAA
TCAtatcaaagaagaaatgaaTGCCGTGCTTCAAAAGAAAGATGATTCCA
ACCATAGGGATGTGGTCAAAGGATTTGGGATCGCTTGTTGTAAGTGTTCT
TATCTCCCTGATTGATTTCTCAAAAAGATATGGTCAGTAGTCTACAGTTA
TTTAATGGTTTAAGTCCATTCTCATCAGGGTCACATCATAAGAAACCtgt
ttctttaacttttacGCAAAGGCGGAGATTGTTAATGTTAATCTTTCCTT
GGGTTTTTCTCTCAGGTTTGATTCCTTTTTTGTTATTCCTTATTGCTGAC
TGTCAAGTAGTGTGTACCAGCTTTATTTGGTTTGCTTGGATCACCTTACA
GCCTTACTAAATTGAGTGAGGAAAACTTCATTGGGTGACCAACCATATGA
CTTGTTTTAGATAATTATTTGATACTAACTGGGATTCCAGAAAATGCTTA
ATAGTTCTGCGATATCAAGATATTAGGCCATGATTTAAGATTTCgatagt
ttttataaaattgagcTGTTATAATTTAGCATTCTGTTATCAATCTGGAT
AGTTCTTTTGTAGTGCCTGTTATCCAATGAGTTTACGTTACGTAGCAGGT
TAGAATGAATGAAAAGCATAAATAGTCTAAAACAATAGATGTCAATCAGG
AAGAGGTTAGAGTTGTATGGATGGTTACGCTCAAAGAAACAAgaacaaag
aagattttcaaaatacaGTCGTCGATTAGATTAAATTGCTTTTAATTAGA
CGGACATTATCAATCCATTTTTAAGCTTTACCGGGAAACATGCAAGGTTC
GATTCACTGTCTGCTTCAAGGAAAGGATTACGTGGAGAGTATTCGTATGA
CACTGGCAGCCGGAGGCGGTAATTGCGCTCGTTCAATGGCTGTTGCCGCT
TTGTTATCTGCTCGAGATAATGTGGACGTTCCTGAAGCGTGGATAAAACG
TACCAAGCGAGGCCAAGAAGTTCTTGATTTGGCAAAGTCTTTATCAGaac
taacaaaataattttttttgaatatttttcatattgtacAATCTATACAT
TTACAAAGCAGgattttgtatgttttttttaattagaaaatTTGACAGAA
AAAAGAAACATGAACAAACTAAAAAATTCATGGAATTGATATCTAATCTT
TGATAACCCAATTCTAGATATTTTCACCCATTTTCGTTGATTTTGGGAAA
tcctttaaaaagttttgtaaCCTTTTTGATCATACTAGTAAAACATGTAA
TCAGTTTCcctaaaatttcaatattttaccttattttattttgatgattg
CATTTAACATCTTTTCAGGAAGAGGGTTTCTACTATTTTAAAACTACCCC
CTTTTATTTTAAACCACATTTTTATCCATAAATAGTTTAAGATCACCAGA
TAATTCGAGATGTTGTATATCTTAAGTGCTGGCATTACATTATTTTTTCT
CATACCACTAGCTTGCAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00018490	TCONS_00018490	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00018490-protein	TCONS_00018490-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000301	supercontig	sc0000301:51202..63569 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
120.78	125.4	28.88	18.85	79.83	62.85	84.94	89.47	156.58	149.55	177.44	165.99	153.26	145.34	179.23	198.89	135.93	134.44	62.18	72.39	95.95	93.44	120.82	122.86	97.39	97.89	123.11	133.7	117.26	102.44

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XLOC_010366 (gene) - C. hemisphaerica