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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017673 ID=TCONS_00017673|Name=TCONS_00017673|organism=Clytia hemisphaerica|type=transcript|length=3756bp
gattacgattttaccagcttttttgcaatttttgccttgctaacccaaat
cttgcaacctctttaccttaaaggaagatcaaaattagagtttttcagcg
ttccgaaaaaaacgcaaagcaaaaattttttcatcttcacaggatcgatt
ctcaacaacaacaaaatacatcttttggtctttgggtttgtttctgatgt
ttttccttcaaagaatatcgatcactttcctctTCCCCtcgagcgcgcga
gaaaaaaatgattagctcacattctcgcgcgggcgaataaagatgaggcg
gcaatcttgcactggggttgctacttagtttccgcccttttttgcgccca
caatagaatggtccaaagacgggggtattccaaatgataaacaatgtcgt
tctgtaagtaagtgtttattttctaagagatacaaaatagtatattgaat
attattaactctTTAAGTATATATTTatgagcccaaatttaaatatctgg
ttaaataaaaaacaaatgatatcagttctgtttttcctcaaaccccaggg
aaaagttttttggccgatttagagctattttacaaatttcggaaaagaac
tcccataggaattccgatacaaaacccgattggttaatttcggaacNgcc
caaatttaaatatctggttaaataaaaaacaaatgatatcagttctgttt
ttcctcaaacccccgggaaaagttttttggccGACTTagagctattttac
aaatttcggaaaagaactcccataggaattccgatacaaaacccgattgg
ttaatttcggaatggcgtcaagaaagtcataatggcagatgattttaaaa
gtttctgaggaaatgtgtggaatttatcaatgttgatggcttgttgatta
tttaaagaaaaaagataacaggtatagctttttctaatcctggaatatcg
aggttccagctacactgcaTGATAGTACAGAACTAGTTTGAAACTGTATT
GGTATTGGCACCTGCTGGCATGAATCCCATCTATAACCTCTATCAATACC
TAGACCTCTAtatttgattctaaaaaagagatAATTGAATCTTTTCTGAG
GCATACAATAACGTTTGTTATAATTTTGTTTCTTACTGCcttttacctta
agggaagaaatttttgcgagaagaaatttttgcggaagaaattttcgcgt
aATTTAATTTCGCTAATTTGGGCataatttgcaaaattaaattccgggaa
acacaccaaaatggctAAACCACGAAatcaaattccgcgaaacacgaata
ttctcacaattaaaaaaatcacccctaaaattggtctttttagggtaATA
TAGGGCTTTTCGTAGACAAATAATTCCCTCAaccacaaaattaaattccg
tgaaacttttgaaattggctcattcgcgaaattaaattccgcgaaacaaa
atttgccatttgaaactctgattcgcgaaattaaattccgcaaaaatttc
ttcccttaagttaTCATTTTGAATAATATAATTACCTGTCCATACTAGAT
TTATTTTCTCTAGATTTTATATTTCCATAGTTATTCATACTGATTCATAG
AAATATTACTTAATCTTgattatttcaaaaagaaatccaTGCGAATTAAT
TAGAAAGTCGCTCCACAtcaattaaaataacttaaatGAATGTCAGAATG
CTCTGGTAGAATGTTTTAGGGGGTGGTATACAAAGATTGTAATTGAAAAA
CAGTTAATCCATGTGTGAATTAAGTGCCAGGATGGGTGGGTGGTCCTAAA
AATCatccaaaatcagttaatacgGATGATATTTTGGAtcaactgcttga
cccccctcCCTGCgcaagggccaaccatggtttgacCCGAggggggaatt
ttgaaaatttgagctctagattgcttgaaaatgcactcaaaacatggact
ttaaaaaaaagacaattatgacaaattaaaaaagaaaaacttagcatttt
gcaaaataaccatttttgaaaaaattattggggggccCCTTGCCCCCCCC
ACCAGTTCCTACGGCACTGCTATGTGAgttgttttctatgttttctaact
aaCTGAATGACTTATCGATAAATCGcgcctcgcggtgtcactaaacttca
gcccctcCCCCCCCCAATATAAAAATGCTTCCTATGGCACTGCATAGAAC
Caggaagtcagaaaaactatgaacaagagactggaaagtacgaaataagt
caagacatgtctttcgtctttatgaagaagccacaACCTAGTGTTTTAGG
ATAAAAGGGCACCTCCTTCTGTCCTTCCCAGGAAGAAAAAACCCTCTGTC
ATTAACAGACAGTGTAGCAACTTCAATCTTCATATGATTCATACTAAATC
TTTACAGGacacgcatatttggactttgtacccagTGCTTCACCTCTAAA
AATGGATGAAGGAGATGCTAGATTAAATGATCTAGTGACTGTATCAATTG
AAGTGCATTGTCCAGAGCAGGAGCATTCTTTTACCAAAGCAAAAATACAT
CATGATGTTACTAAAGAGATAGAATCTACTGTAATAAATAATAGTGAAGA
TAAATCTGGTAAAAATTTGTGTCCTTTTTGTGTTACTGGTTTCGCCAGAT
TGAGAGATCTTAGAACACATGTAACAAGAAAACATAGTGATATGCCAATG
CCAGAGAATCTTAATACAGGAAAAACGAAATGCTTGGAATGTAATGCACG
GTTTTGTCGAACAACAGAGTTGATTTCACATTTAAAATCAGAACACAAAA
TGGAATTTCAGATTGAAACGttagcttttcaaaatattgaagagtttgaa
aaatggaaggATGACTTTGAGAAGCGAAATCAATGTAGTTATACTACTTA
TGGatcaaaacagaaaagttgtaCCTACCAAACTTATCGATGCAGTAGGA
GTGGTTGGTACCGAACAAAGATAACTGAAGATGACCAAAgacaaaggaaa
atgaaaacttcAGGAACTAGTAAGATTGGCAATAATTGTACATCCACAAT
AAAAGTTCAGGACAAAGAAGATGGAACAATTGAAGCCACCATTAATATGA
CACATTACTCACATGACGTTGATATACAACACGCTTCACGAAAAGTAAGA
GACTACAATATTGAACAGGGAACTACAGATTATATTTATCCTGAGGGTAA
CGATCGAAGAAGGATGCATGGCAGAAAGCGTCCTTATAAACGTAGAGTTA
CTCCAGCACAACGTGAAGAATTCAACAATATGAAACACGAAATTCAGTTT
AAGCTTTTAAAAATACAAGAACTTGTAGAATGAAGCTCAGTTAACAATTt
gcaaaatgtaaaaatgcttTACGATAAACTTNGGAAGCTCAGTCAACAAT
TtgcaaaatgtaaaaatgcttTACGATAAACTTGAGACAGCAATTACTGT
ATATGAGGAAACAAATGTGCCCTAGTATGAACTGGTTCTTTTATATCATT
ATTTATTTTgtacaaagttttgaaatataaaagtttattgacgCTTTACT
ATTTGAAAGGTTCTAACACGTGTGCCTTATGGTAAAGCACACAAACCATT
GCTGTCATAGGTCAAACTCCTTTCAAACTTGACAGGCATAAAGTTTTCTT
GCCTTCATCTGTGTCCAGACAAGATAAATATGCCACATTTTGGATGGGCT
TGTTTTTCTGTAAATTCATTATACTGCTAACTTTGAGGCTGTaagttatc
tttcca Run BLAST on NCBI protein sequence of TCONS_00017673-protein >TCONS_00017673-protein ID=TCONS_00017673-protein|Name=TCONS_00017673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
MDEGDARLNDLVTVSIEVHCPEQEHSFTKAKIHHDVTKEIESTVINNSED
KSGKNLCPFCVTGFARLRDLRTHVTRKHSDMPMPENLNTGKTKCLECNAR
FCRTTELISHLKSEHKMEFQIETLAFQNIEEFEKWKDDFEKRNQCSYTTY
GSKQKSCTYQTYRCSRSGWYRTKITEDDQRQRKMKTSGTSKIGNNCTSTI
KVQDKEDGTIEATINMTHYSHDVDIQHASRKVRDYNIEQGTTDYIYPEGN
DRRRMHGRKRPYKRRVTPAQREEFNNMKHEIQFKLLKIQELVE Run BLAST on NCBI transcript from alignment at sc0000273:203633..215137+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017673 ID=TCONS_00017673|Name=TCONS_00017673|organism=Clytia hemisphaerica|type=transcript|length=11505bp|location=Sequence derived from alignment at sc0000273:203633..215137+ (Clytia hemisphaerica)
gattacgattttaccagcttttttgcaatttttgccttgctaacccaaat
cttgcaacctctttaccttaaaggaagatcaaaattagagtttttcagcg
ttccgaaaaaaacgcaaagcaaaaattttttcatcttcacaggatcgatt
ctcaacaacaacaaaatacatcttttggtctttgggtttgtttctgatgt
ttttccttcaaagaatatcgatcactttcctctTCCCCtcgagcgcgcga
gaaaaaaatgattagctcacattctcgcgcgggcgaataaagatgaggcg
gcaatcttgcactggggttgctacttagtttccgcccttttttgcgccca
caatagaatggtccaaagacgggggtattccaaatgataaacaatgtcgt
tctgtaagtaagtgtttattttctaagagatacaaaatagtatattgaat
attattaactctTTAAGTATATATTTatgagcccaaatttaaatatctgg
ttaaataaaaaacaaatgatatcagttctgtttttcctcaaaccccaggg
aaaagttttttggccgatttagagctattttacaaatttcggaaaagaac
tcccataggaattccgatacaaaacccgattggttaatttcggaacNgcc
caaatttaaatatctggttaaataaaaaacaaatgatatcagttctgttt
ttcctcaaacccccgggaaaagttttttggccGACTTagagctattttac
aaatttcggaaaagaactcccataggaattccgatacaaaacccgattgg
ttaatttcggaatggcgtcaagaaagtcataatggcagatgattttaaaa
gtttctgaggaaatgtgtggaatttatcaatgttgatggcttgttgatta
tttaaagaaaaaagataacaggtatagctttttctaatcctggaatatcg
aggttccagctacactgcaTGATAGTACAGAACTAGTTTGAAACTGTATT
GGTATTGGCACCTGCTGGCATGAATCCCATCTATAACCTCTATCAATACC
TAGACCTCTAtatttgattctaaaaaagagatAATTGAATCTTTTCTGAG
GCATACAATAACGTTTGTTATAATTTTGTTTCTTACTGCcttttacctta
agggaagaaatttttgcgagaagaaatttttgcggaagaaattttcgcgt
aATTTAATTTCGCTAATTTGGGCataatttgcaaaattaaattccgggaa
acacaccaaaatggctAAACCACGAAatcaaattccgcgaaacacgaata
ttctcacaattaaaaaaatcacccctaaaattggtctttttagggtaATA
TAGGGCTTTTCGTAGACAAATAATTCCCTCAaccacaaaattaaattccg
tgaaacttttgaaattggctcattcgcgaaattaaattccgcgaaacaaa
atttgccatttgaaactctgattcgcgaaattaaattccgcaaaaatttc
ttcccttaagttaTCATTTTGAATAATATAATTACCTGTCCATACTAGAT
TTATTTTCTCTAGATTTTATATTTCCATAGTTATTCATACTGATTCATAG
AAATATTACTTAATCTTgattatttcaaaaagaaatccaTGCGAATTAAT
TAGAAAGTCGCTCCACAtcaattaaaataacttaaatGAATGTCAGAATG
CTCTGGTAGAATGTTTTAGGGGGTGGTATACAAAGATTGTAATTGAAAAA
CAGTTAATCCATGTGTGAATTAAGTGCCAGGATGGGTGGGTGGTCCTAAA
AATCatccaaaatcagttaatacgGATGATATTTTGGAtcaactgcttga
cccccctcCCTGCgcaagggccaaccatggtttgacCCGAggggggaatt
ttgaaaatttgagctctagattgcttgaaaatgcactcaaaacatggact
ttaaaaaaaagacaattatgacaaattaaaaaagaaaaacttagcatttt
gcaaaataaccatttttgaaaaaattattggggggccCCTTGCCCCCCCC
ACCAGTTCCTACGGCACTGCTATGTGAgttgttttctatgttttctaact
aaCTGAATGACTTATCGATAAATCGcgcctcgcggtgtcactaaacttca
gcccctcCCCCCCCCAATATAAAAATGCTTCCTATGGCACTGCATAGAAC
Caggaagtcagaaaaactatgaacaagagactggaaagtacgaaataagt
caagacatgtctttcgtctttatgaagaagccacaACCTAGGTACCGTAA
GTTACggtctaatatcaacatccctCGTTTGTCTAATTCTGACACTCTTC
TTTAgttttagagacaggaataatatgaaagcttgaatcacttagtgaaa
aaggattattcctctctgaccactcagcaaagaaaaatagttttgaccTT
TCTATCAATCTCGGCTGATAAAAAAGGTTTCTGACATATCTCTATATTTG
TGTACACTAATAGCCTTACGTTTGTTCATTTTTGAATAACTAAGCAATAT
TACTAGGGTGATATTTTATGAGATACTTCAAACAATACTTtttaaatctt
ctggacaagaaatATTGAACAGCCAAAAGCTAATCACGACACTTGAactt
agaagttttgcggtaaaacacaaattattgtcaaagcaGAATTTCcgaat
gagtctaaaaagtttttaaataagataaaataaaatcttttgcaGTTGTT
CCCTTAgcttaatgccaatgattagttggctagagaatatcaaccaatat
tttgacaagaaTTAACCTttatagccccccccccaagtGGACCTGATTAA
GCATTTTAAgagggaaaaaacaacaaagttactgtaagcaaattttcaat
cgatcatatctttaaaagaCTTCAAAcccccactgagattttttgaggtt
ataaactagacctactaatgAAGCcttactgaaagtttcaaaaaaattta
ttgttgCCTTTAAAAAGATAcgacatcttgaattttgctccagatctgcc
AAGATAgcaattttttggccatttttgacggttacgcaaaaatagaaatc
ctgaaaattttattttcccgccaaaacccaccagtaaaccactccaggtc
aaaagtttgcttagATTATggaaagtttgaagccctctacaggaggtgct
agagatttcatttaggggaaaattttggagactcgatttgattttttctg
attccctacaaaaagttctgtaaagcagctttctaatgtactcaAATAAA
AATTCgcaattggctttcaaaatctgctccctaccagagttcatgatttt
tagggggtcaattttcgcttagtactaatagcctatctttgagacgctgt
atcttcaaaactactcaagatatcaaggtgaaattttcagggtcttattt
tcttgtgtgatagaacatttggtccaaatttcagcaaaatccaagagggt
gaGTTAGgatactttctttattctgaagatttaaaaaaaaatggctctta
atgcCCTAAACACACCACACAAACCACGGCCGCACAACAACCCCCCACAT
CactattttcctcttttttttcctcCTAGTAAAGTTCTTCTAAGCAAACT
CTTAAAAAACATTTATATCGTTTTATTTTAACTAAACTTGCATCTGAATA
GACTCTGGCTATTTACTTTCCTATACTCTTTGTCTTCTTGTTTTgatctt
tattattattattttttattattctcTTCCTCTGGTCTGAACTTGCAAAC
TCAACTTTAGTAGTTAATGCTAAACCAAGGTTACTCCGTGGGCACTAGTT
GGAACTATCTTTGTTGCCTCCCTTCCGTTTCTCATTTACTCCCTGTACTA
GTATGAAATATCATAGAGATGTTTTTACAACTTGTGCTAGTATTTTTAAA
CCATCCCCTCTTCTGCTGGTCCTCTCTTCTGCGCTGACATTTTTGAGTTT
ATTAAATTACTTCCAACATAACTGTCCAGTATTTTTTTTatgttactttt
ttctttaacgTTTTAGTGTTTTAGGATAAAAGGGCACCTCCTTCTGTCCT
TCCCAGGAAGAAAAAACCCTCTGTCATTAACAGACAGTGTAGCAACTTCA
ATCTTCATATGATTCATACTAAATCTTTACAGGacacgcatatttggact
ttgtacccagTGCTTCACGTAAGTGTTCTTAAAGCTAAAGTCATACAGgc
tattcaaaaagaaaatagtcgaaaatgaaagaaagtttacaaatcttttg
aaaacGTTCTCGATCTTTCCCAAAAGTTTCAGTGAGTTTAGAGAGCGTGC
CAAAACGCTCTCTGtttaaaaaactaataaataaaAGGGAGGGATCAGGA
ACCTTTTGTACAATTTGTTTTACTGGAATGATCCATTCTATTTTTATCTA
AAGTCGTTTTGTGATGACACGAATATCAAGGGAGATTTCTAAAAGATAAG
AAAGAGAAATTGTCTGTATATAAATGAAGGAATATTGATTTCACTAAATT
TTATCCGGTTTTGATCCAAGATGAGCTTCAGAGCGAGCTACCACTGAAGT
AAGGAATAGTACACCTTGCATACCATGGTATTGTATTCCATAGGAAGGGA
AGGTCTGTGGCTTGGAGAAATTTCTAGAAAGAAGTTTTCCATAAAACCTG
AATATTCAGAGTTGTAAATatgaataaaccagccgaggctggaaggtcag
ccaatatagtcgcgcggctgaggtcgaaaaaagtggctagaaaatgattt
tcgtgatacacctcttagattccacttttttcgatggaaactctcgaatt
agtatatgtAGATTCCAAAATCAAAAAGTTTCCACAATATTATCGTGCAA
GTAACGAGTAAATGGCGActttttgcgtttccaggcaaaattgtaaggcc
tggaaattcatgatttttgggggtcttcaaattaaaaaaagacctatatc
acatgatagagctcttcaaactgagcaaaaaagtgtattacaccaaagtc
ccaacttctctagattaaaagttatgggcctatttatggtcaaaaaggta
tttaattttgcataaattaatgcagattgtggggaaattccctgttttcc
atcagttttttaccacaaataggccaataaattttaaTCTAGAGaggttg
ggactttggtgtaatacacttttttgctcagtttgaatagctctatcatg
tgatataggtctttttttaatttgaagacccccaaaaaatcatgaatttc
catgccttgcaattttgcctggaaacgcaaaaaatcgccaattactcgtt
acttgcacgataatatcgtggaaactttttgattttggaatctacatNNN
CTTAGCTagagatagctttaataagtgggttaacagatgtaagagatgta
ctgaaacagagtagactaaaaatgttgaataatgtacaaactgtgaaaca
tttgataacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgtcatctgaccgaccctgatttacggtcagcaggt
agagttggagagtcgaaaagcttttccgctgctttgctggatttccactg
tcgacctctacacgctctgtgtttacaagatttcaaatcgaagtagcgag
ccgcatgctaatggagagtaaactgaaaaccagtttatccacggtttctc
aattttttaattcggatcagtccacacgtatttcctttcaacaagatgta
gctgcttcttaacagaaaaatattttcgaacgaccgaacgacccccactt
tttaaagtagaaatgacgggaaccaaacaattttttgcgattcacCTTAT
CATcaaaacacgtccaagtccaaaaaaagcacgattgcatccagtcttta
tcaaatttagacagtagctgtgcttttgtaaactttatcaaattccaata
acattataacaccatcaataccccctagaggcaaacaagaaaaatatgtt
tttattgcaaaaactaataaaaagcagcaataaaaagtatcaaaaaattc
aacaaaacaaaaacttgagcaaacggctttaaaccttcaaaagatgtaga
aaaagaatccccttgatgaaaatcatgtgtttgatttgccgagttaaaaa
aatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNttttttgccgtcttatggtggAAGAAGAActgaattttacc
tatttgaatgctcagcttaggctgaccaaaaagGCCTTTTCTAATGTGAT
ATTTACAATAAAACCCTTGAATCATTTAAAAACACCAGGGTGAGGGTGCT
gtcatcaaaagatttttttttaatctgccTTGAATAAAAATGGATTTGTT
TGCACATTAAATGTCTGATCGTGCATTTCAGCTCTAAAAATGGATGAAGG
AGATGCTAGATTAAATGATCTAGTGACTGTATCAATTGAAGTGCATTGTC
CAGAGCAGGAGCATTCTTTTACCAAAGCAAAAATACATCATGATGTTACT
AAAGAGATAGAATCTACTGTAATAAATAATAGTGAAGATAAATCTGGTAA
AAATTTGTGTCCTTTTTGTGTTACTGGTTTCGCCAGATTGAGAGATCTTA
GAACACATGTAACAAGAAAACATAGTGATATGCCAATGCCAGAGAATCTT
AATACAGGAAAAACGAAATGCTTGGAATGTAATGCACGGTTTTGTCGAAC
AACAGAGTTGATTTCACATTTAAAATCAGAACACAAAATGGAATTTCAGA
TTGAAACGttagcttttcaaaatattgaaggTAGGCTAGATTGTTTTTGA
TTAAATAACTCTGATATAAACTGATATAATCACCTTATTATTGTACACGA
AAATAAGTAGACATGTATTTAGCGtgaattcaaaaatttcatgttAATTA
AAACTCCTTTAATTAGGCgtctttgaaaaagcaaataaaatttatgcTAA
TTTTTTGTGTGGTAATTTGAAGGTCGTTAAGTATGTGTCTACTTATTTTC
ATGTGATTTTAAGGTACATCTACTGATCTTATGTTTTGTCTATCTATCta
cattaaatttaaaaaagtttttttctaatcTAAAAGGTGCTTTTAGTTAG
TTGTATTTTCAACCATAGCAATCTGTTATTGTTACATCATCAGGTAGATT
TATATCCCCTTAGCCGTAAAAATCTAAAGCTATAcatattgaaaatttat
ttatccGTTTCTTCTTTCTATCTCAAAAATTCcagagtttgaaaaatgga
aggATGACTTTGAGAAGCGAAATCAATGTAGTTATACTACTTATGGatca
aaacagaaaagttgtaCCTACCAAACTTATCGATGCAGTAGGAGTGGTTG
GTACCGAACAAAGATAACTGAAGATGACCAAAgacaaaggaaaatgaaaa
cttcAGGTGCTTATTTTATGCATATTGTATTGTAACGTGAAGAATTTATT
ATGTGTATCCAAATTGTTTTAATACTATTGAAGAAGTTAAACTAGAAAAt
agaaagtaataaaaaaagtAGACTTGTGATCTTGTTGTAGGTTAAATGTG
ACTCCCCACGCAATTTTTAGTACATGAAAATTGGACTAGTAgcaatcaaa
tttaaaatttcaaagtattGCCCAAAAGAATCTGACCTGTCCAATCTTAG
GCGACCAGTTGGATGTCCTGGCTGGCTTCTTGCTTATTGGTTCATGTGTT
TGTTAGTAACAGTAACTGTAATAACaacattgaaataaattttttcaaag
aattttagcCAAACAATTGTTAGAATAAGCGCATCATAATGGCCAATAAA
TTTAATTGTTGTCTGATTTACAGGTACTTAAAATACACTTGGAGAGTCAC
AAAGTTATCTTATATATTTCATATAATTATATTTCATAGATGAAAATAAT
AGAATGAAATTATAAATAATTTGTTGTCTCTTTCGTATCTTTAGGAACTA
GTAAGATTGGCAATAATTGTACATCCACAATAAAAGTTCAGGACAAAGAA
GATGGAACAATTGAAGCCACCATTAATATGACACATTACTCACATGACGT
TGATATACAACACGCTTCACGAAAGTTAGTGActttttgttttgtctttt
taggagttcctttttttttaatgtaatgAAAGCCCAACACAACAAAAGCT
CACCGTCGCTGATTTCTTTCCTCATTCTCACAAAATCTTATTTTGATATT
ATTCAGAGTAAGAGACTACAATATTGAACAGGGAACTACAGATTATATTT
ATCCTGAGGGTAACGATCGAAGAAGGATGCATGGCAGAAAGCGTCCTTAT
AAACGTAGAGgtttgtattcatgatatgcaacactggagagtcttctgag
aacttttaaaattttacaccctatACATCACATAGAAAAAGTAACgtatt
ggtttgaaattttttgaaaattctcagaagactctccagtgttgTATATC
ATAAATTATTCTAATACTTTTCCAGGATTAAAACTTTCATGGTAAAAGAC
AAATTTTACAATAATTActcattttcttgaaatttcacTGGTCATTCAGA
CTGTTGGAGGACCAACCAGGTACTTTTAGGGCATACAAACGTTTCTGCTT
GCAAAAGTTTGTGCCTAAAAGTACCTTGAATCACTCAGAGAATCACACAT
GACTAATCAAACCCTCATTTTACAAATTACACCAAGTTGATTTCATATTT
CCAAAGTATGTCTTTTTGTAAAGATTTATTTCGATTTATCTTTCAGTTAC
TCCAGCACAACGTGAAGAATTCAACAATATGAAACACGAAATTCAGTTTA
AGCTTTTAAAAATACAAGAACTTGTAGAATGAAGCTCAGTTAACAATTtg
caaaatgtaaaaatgcttTACGATAAACTTNGGAAGCTCAGTCAACAATT
tgcaaaatgtaaaaatgcttTACGATAAACTTGAGACAGCAATTACTGTA
TATGAGGAAACAAATGTGCCCTAGTATGAACTGGTTCTTTTATATCATTA
TTTATTTTgtacaaagttttgaaatataaaagtttattgacgCTTTACTA
TTTGAAAGGTTCTAACACGTGTGCCTTATGGTAAAGCACACAAACCATTG
CTGTCATAGGTCAAACTCCTTTCAAACTTGACAGGCATAAAGTTTTCTTG
CCTTCATCTGTGTCCAGACAAGATAAATATGCCACATTTTGGATGGGCTT
GTTTTTCTGTAAATTCATTATACTGCTAACTTTGAGGCTGTaagttatct
ttcca Coding sequence (CDS) from alignment at sc0000273:203633..215137+ >TCONS_00017673 ID=TCONS_00017673|Name=TCONS_00017673|organism=Clytia hemisphaerica|type=CDS|length=4410bp|location=Sequence derived from alignment at sc0000273:203633..215137+ (Clytia hemisphaerica)
ATGGATGAAGGAGATGCTAGATTAAATGATCTAGTGACTGTATCAATTGA
AGTGCATTGTCCAGAGCAGGAGCATTCTTTTACCAAAGCAAAAATACATC
ATGATGTTACTAAAGAGATAGAATCTACTGTAATAAATAATAGTGAAGAT
AAATCTGGTAAAAATTTGTGTCCTTTTTGTGTTACTGGTTTCGCCAGATT
GAGAGATCTTAGAACACATGTAACAAGAAAACATAGTGATATGCCAATGC
CAGAGAATCTTAATACAGGAAAAACGAAATGCTTGGAATGTAATGCACGG
TTTTGTCGAACAACAGAGTTGATTTCACATTTAAAATCAGAACACAAAAT
GGAATTTCAGATTGAAACGttagcttttcaaaatattgaagagtttgaaa
aatggaaggATGACTTTGAGAAGCGAAATCAATGTAGTTATACTACTTAT
GGatcaaaacagaaaagttgtaCCTACCAAACTTATCGATGCAGTAGGAG
TGGTTGGTACCGAACAAAGATAACTGAAGATGACCAAAgacaaaggaaaa
tgaaaacttcAGGAACTAGTAAGATTGGCAATAATTGTACATCCACAATA
AAAGTTCAGGACAAAGAAGATGGAACAATTGAAGCCACCATTAATATGAC
ACATTACTCACATGACGTTGATATACAACACGCTTCACGAAAAGTAAGAG
ACTACAATATTGAACAGGGAACTACAGATTATATTTATCCTGAGGGTAAC
GATCGAAGAAGGATGCATGGCAGAAAGCGTCCTTATAAACGTAGAGTTAC
TCCAGCACAACGTGAAGAATTCAACAATATGAAACACGAAATTCAGTTTA
AGCTTTTAAAAATACAAGAACTTGTAGAATGAATGGATGAAGGAGATGCT
AGATTAAATGATCTAGTGACTGTATCAATTGAAGTGCATTGTCCAGAGCA
GGAGCATTCTTTTACCAAAGCAAAAATACATCATGATGTTACTAAAGAGA
TAGAATCTACTGTAATAAATAATAGTGAAGATAAATCTGGTAAAAATTTG
TGTCCTTTTTGTGTTACTGGTTTCGCCAGATTGAGAGATCTTAGAACACA
TGTAACAAGAAAACATAGTGATATGCCAATGCCAGAGAATCTTAATACAG
GAAAAACGAAATGCTTGGAATGTAATGCACGGTTTTGTCGAACAACAGAG
TTGATTTCACATTTAAAATCAGAACACAAAATGGAATTTCAGATTGAAAC
GttagcttttcaaaatattgaagagtttgaaaaatggaaggATGACTTTG
AGAAGCGAAATCAATGTAGTTATACTACTTATGGatcaaaacagaaaagt
tgtaCCTACCAAACTTATCGATGCAGTAGGAGTGGTTGGTACCGAACAAA
GATAACTGAAGATGACCAAAgacaaaggaaaatgaaaacttcAGGAACTA
GTAAGATTGGCAATAATTGTACATCCACAATAAAAGTTCAGGACAAAGAA
GATGGAACAATTGAAGCCACCATTAATATGACACATTACTCACATGACGT
TGATATACAACACGCTTCACGAAAAGTAAGAGACTACAATATTGAACAGG
GAACTACAGATTATATTTATCCTGAGGGTAACGATCGAAGAAGGATGCAT
GGCAGAAAGCGTCCTTATAAACGTAGAGTTACTCCAGCACAACGTGAAGA
ATTCAACAATATGAAACACGAAATTCAGTTTAAGCTTTTAAAAATACAAG
AACTTGTAGAATGAATGGATGAAGGAGATGCTAGATTAAATGATCTAGTG
ACTGTATCAATTGAAGTGCATTGTCCAGAGCAGGAGCATTCTTTTACCAA
AGCAAAAATACATCATGATGTTACTAAAGAGATAGAATCTACTGTAATAA
ATAATAGTGAAGATAAATCTGGTAAAAATTTGTGTCCTTTTTGTGTTACT
GGTTTCGCCAGATTGAGAGATCTTAGAACACATGTAACAAGAAAACATAG
TGATATGCCAATGCCAGAGAATCTTAATACAGGAAAAACGAAATGCTTGG
AATGTAATGCACGGTTTTGTCGAACAACAGAGTTGATTTCACATTTAAAA
TCAGAACACAAAATGGAATTTCAGATTGAAACGttagcttttcaaaatat
tgaagagtttgaaaaatggaaggATGACTTTGAGAAGCGAAATCAATGTA
GTTATACTACTTATGGatcaaaacagaaaagttgtaCCTACCAAACTTAT
CGATGCAGTAGGAGTGGTTGGTACCGAACAAAGATAACTGAAGATGACCA
AAgacaaaggaaaatgaaaacttcAGGAACTAGTAAGATTGGCAATAATT
GTACATCCACAATAAAAGTTCAGGACAAAGAAGATGGAACAATTGAAGCC
ACCATTAATATGACACATTACTCACATGACGTTGATATACAACACGCTTC
ACGAAAAGTAAGAGACTACAATATTGAACAGGGAACTACAGATTATATTT
ATCCTGAGGGTAACGATCGAAGAAGGATGCATGGCAGAAAGCGTCCTTAT
AAACGTAGAGTTACTCCAGCACAACGTGAAGAATTCAACAATATGAAACA
CGAAATTCAGTTTAAGCTTTTAAAAATACAAGAACTTGTAGAATGAATGG
ATGAAGGAGATGCTAGATTAAATGATCTAGTGACTGTATCAATTGAAGTG
CATTGTCCAGAGCAGGAGCATTCTTTTACCAAAGCAAAAATACATCATGA
TGTTACTAAAGAGATAGAATCTACTGTAATAAATAATAGTGAAGATAAAT
CTGGTAAAAATTTGTGTCCTTTTTGTGTTACTGGTTTCGCCAGATTGAGA
GATCTTAGAACACATGTAACAAGAAAACATAGTGATATGCCAATGCCAGA
GAATCTTAATACAGGAAAAACGAAATGCTTGGAATGTAATGCACGGTTTT
GTCGAACAACAGAGTTGATTTCACATTTAAAATCAGAACACAAAATGGAA
TTTCAGATTGAAACGttagcttttcaaaatattgaagagtttgaaaaatg
gaaggATGACTTTGAGAAGCGAAATCAATGTAGTTATACTACTTATGGat
caaaacagaaaagttgtaCCTACCAAACTTATCGATGCAGTAGGAGTGGT
TGGTACCGAACAAAGATAACTGAAGATGACCAAAgacaaaggaaaatgaa
aacttcAGGAACTAGTAAGATTGGCAATAATTGTACATCCACAATAAAAG
TTCAGGACAAAGAAGATGGAACAATTGAAGCCACCATTAATATGACACAT
TACTCACATGACGTTGATATACAACACGCTTCACGAAAAGTAAGAGACTA
CAATATTGAACAGGGAACTACAGATTATATTTATCCTGAGGGTAACGATC
GAAGAAGGATGCATGGCAGAAAGCGTCCTTATAAACGTAGAGTTACTCCA
GCACAACGTGAAGAATTCAACAATATGAAACACGAAATTCAGTTTAAGCT
TTTAAAAATACAAGAACTTGTAGAATGAATGGATGAAGGAGATGCTAGAT
TAAATGATCTAGTGACTGTATCAATTGAAGTGCATTGTCCAGAGCAGGAG
CATTCTTTTACCAAAGCAAAAATACATCATGATGTTACTAAAGAGATAGA
ATCTACTGTAATAAATAATAGTGAAGATAAATCTGGTAAAAATTTGTGTC
CTTTTTGTGTTACTGGTTTCGCCAGATTGAGAGATCTTAGAACACATGTA
ACAAGAAAACATAGTGATATGCCAATGCCAGAGAATCTTAATACAGGAAA
AACGAAATGCTTGGAATGTAATGCACGGTTTTGTCGAACAACAGAGTTGA
TTTCACATTTAAAATCAGAACACAAAATGGAATTTCAGATTGAAACGtta
gcttttcaaaatattgaagagtttgaaaaatggaaggATGACTTTGAGAA
GCGAAATCAATGTAGTTATACTACTTATGGatcaaaacagaaaagttgta
CCTACCAAACTTATCGATGCAGTAGGAGTGGTTGGTACCGAACAAAGATA
ACTGAAGATGACCAAAgacaaaggaaaatgaaaacttcAGGAACTAGTAA
GATTGGCAATAATTGTACATCCACAATAAAAGTTCAGGACAAAGAAGATG
GAACAATTGAAGCCACCATTAATATGACACATTACTCACATGACGTTGAT
ATACAACACGCTTCACGAAAAGTAAGAGACTACAATATTGAACAGGGAAC
TACAGATTATATTTATCCTGAGGGTAACGATCGAAGAAGGATGCATGGCA
GAAAGCGTCCTTATAAACGTAGAGTTACTCCAGCACAACGTGAAGAATTC
AACAATATGAAACACGAAATTCAGTTTAAGCTTTTAAAAATACAAGAACT
TGTAGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017673-exon-sc0000273-1491911889:203633..205923 | TCONS_00017673-exon-sc0000273-1491911889:203633..205923 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1510915933:203633..205923 | TCONS_00017673-exon-sc0000273-1510915933:203633..205923 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1575043694:203633..205923 | TCONS_00017673-exon-sc0000273-1575043694:203633..205923 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1491911889:207699..207850 | TCONS_00017673-exon-sc0000273-1491911889:207699..207850 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1510915933:207699..207850 | TCONS_00017673-exon-sc0000273-1510915933:207699..207850 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1575043694:207699..207850 | TCONS_00017673-exon-sc0000273-1575043694:207699..207850 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1491911889:212264..212662 | TCONS_00017673-exon-sc0000273-1491911889:212264..212662 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1510915933:212264..212662 | TCONS_00017673-exon-sc0000273-1510915933:212264..212662 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1575043694:212264..212662 | TCONS_00017673-exon-sc0000273-1575043694:212264..212662 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1491911889:213118..213288 | TCONS_00017673-exon-sc0000273-1491911889:213118..213288 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1510915933:213118..213288 | TCONS_00017673-exon-sc0000273-1510915933:213118..213288 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1575043694:213118..213288 | TCONS_00017673-exon-sc0000273-1575043694:213118..213288 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1491911889:213827..213956 | TCONS_00017673-exon-sc0000273-1491911889:213827..213956 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1510915933:213827..213956 | TCONS_00017673-exon-sc0000273-1510915933:213827..213956 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1575043694:213827..213956 | TCONS_00017673-exon-sc0000273-1575043694:213827..213956 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1491911889:214089..214192 | TCONS_00017673-exon-sc0000273-1491911889:214089..214192 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1510915933:214089..214192 | TCONS_00017673-exon-sc0000273-1510915933:214089..214192 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1575043694:214089..214192 | TCONS_00017673-exon-sc0000273-1575043694:214089..214192 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1491911889:214629..215137 | TCONS_00017673-exon-sc0000273-1491911889:214629..215137 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1510915933:214629..215137 | TCONS_00017673-exon-sc0000273-1510915933:214629..215137 | Clytia hemisphaerica | exon |
| TCONS_00017673-exon-sc0000273-1575043694:214629..215137 | TCONS_00017673-exon-sc0000273-1575043694:214629..215137 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000273 | supercontig | sc0000273:203633..215137 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
The following BLAST results are available for this feature:
|
