XLOC_009885 (gene) - C. hemisphaerica

Overview
NameXLOC_009885
Unique NameXLOC_009885
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000273:203633..215137+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009885 ID=XLOC_009885|Name=XLOC_009885|organism=Clytia hemisphaerica|type=gene|length=11505bp|location=Sequence derived from alignment at sc0000273:203633..215137+ (Clytia hemisphaerica)
gattacgattttaccagcttttttgcaatttttgccttgctaacccaaat cttgcaacctctttaccttaaaggaagatcaaaattagagtttttcagcg ttccgaaaaaaacgcaaagcaaaaattttttcatcttcacaggatcgatt ctcaacaacaacaaaatacatcttttggtctttgggtttgtttctgatgt ttttccttcaaagaatatcgatcactttcctctTCCCCtcgagcgcgcga gaaaaaaatgattagctcacattctcgcgcgggcgaataaagatgaggcg gcaatcttgcactggggttgctacttagtttccgcccttttttgcgccca caatagaatggtccaaagacgggggtattccaaatgataaacaatgtcgt tctgtaagtaagtgtttattttctaagagatacaaaatagtatattgaat attattaactctTTAAGTATATATTTatgagcccaaatttaaatatctgg ttaaataaaaaacaaatgatatcagttctgtttttcctcaaaccccaggg aaaagttttttggccgatttagagctattttacaaatttcggaaaagaac tcccataggaattccgatacaaaacccgattggttaatttcggaacNgcc caaatttaaatatctggttaaataaaaaacaaatgatatcagttctgttt ttcctcaaacccccgggaaaagttttttggccGACTTagagctattttac aaatttcggaaaagaactcccataggaattccgatacaaaacccgattgg ttaatttcggaatggcgtcaagaaagtcataatggcagatgattttaaaa gtttctgaggaaatgtgtggaatttatcaatgttgatggcttgttgatta tttaaagaaaaaagataacaggtatagctttttctaatcctggaatatcg aggttccagctacactgcaTGATAGTACAGAACTAGTTTGAAACTGTATT GGTATTGGCACCTGCTGGCATGAATCCCATCTATAACCTCTATCAATACC TAGACCTCTAtatttgattctaaaaaagagatAATTGAATCTTTTCTGAG GCATACAATAACGTTTGTTATAATTTTGTTTCTTACTGCcttttacctta agggaagaaatttttgcgagaagaaatttttgcggaagaaattttcgcgt aATTTAATTTCGCTAATTTGGGCataatttgcaaaattaaattccgggaa acacaccaaaatggctAAACCACGAAatcaaattccgcgaaacacgaata ttctcacaattaaaaaaatcacccctaaaattggtctttttagggtaATA TAGGGCTTTTCGTAGACAAATAATTCCCTCAaccacaaaattaaattccg tgaaacttttgaaattggctcattcgcgaaattaaattccgcgaaacaaa atttgccatttgaaactctgattcgcgaaattaaattccgcaaaaatttc ttcccttaagttaTCATTTTGAATAATATAATTACCTGTCCATACTAGAT TTATTTTCTCTAGATTTTATATTTCCATAGTTATTCATACTGATTCATAG AAATATTACTTAATCTTgattatttcaaaaagaaatccaTGCGAATTAAT TAGAAAGTCGCTCCACAtcaattaaaataacttaaatGAATGTCAGAATG CTCTGGTAGAATGTTTTAGGGGGTGGTATACAAAGATTGTAATTGAAAAA CAGTTAATCCATGTGTGAATTAAGTGCCAGGATGGGTGGGTGGTCCTAAA AATCatccaaaatcagttaatacgGATGATATTTTGGAtcaactgcttga cccccctcCCTGCgcaagggccaaccatggtttgacCCGAggggggaatt ttgaaaatttgagctctagattgcttgaaaatgcactcaaaacatggact ttaaaaaaaagacaattatgacaaattaaaaaagaaaaacttagcatttt gcaaaataaccatttttgaaaaaattattggggggccCCTTGCCCCCCCC ACCAGTTCCTACGGCACTGCTATGTGAgttgttttctatgttttctaact aaCTGAATGACTTATCGATAAATCGcgcctcgcggtgtcactaaacttca gcccctcCCCCCCCCAATATAAAAATGCTTCCTATGGCACTGCATAGAAC Caggaagtcagaaaaactatgaacaagagactggaaagtacgaaataagt caagacatgtctttcgtctttatgaagaagccacaACCTAGGTACCGTAA GTTACggtctaatatcaacatccctCGTTTGTCTAATTCTGACACTCTTC TTTAgttttagagacaggaataatatgaaagcttgaatcacttagtgaaa aaggattattcctctctgaccactcagcaaagaaaaatagttttgaccTT TCTATCAATCTCGGCTGATAAAAAAGGTTTCTGACATATCTCTATATTTG TGTACACTAATAGCCTTACGTTTGTTCATTTTTGAATAACTAAGCAATAT TACTAGGGTGATATTTTATGAGATACTTCAAACAATACTTtttaaatctt ctggacaagaaatATTGAACAGCCAAAAGCTAATCACGACACTTGAactt agaagttttgcggtaaaacacaaattattgtcaaagcaGAATTTCcgaat gagtctaaaaagtttttaaataagataaaataaaatcttttgcaGTTGTT CCCTTAgcttaatgccaatgattagttggctagagaatatcaaccaatat tttgacaagaaTTAACCTttatagccccccccccaagtGGACCTGATTAA GCATTTTAAgagggaaaaaacaacaaagttactgtaagcaaattttcaat cgatcatatctttaaaagaCTTCAAAcccccactgagattttttgaggtt ataaactagacctactaatgAAGCcttactgaaagtttcaaaaaaattta ttgttgCCTTTAAAAAGATAcgacatcttgaattttgctccagatctgcc AAGATAgcaattttttggccatttttgacggttacgcaaaaatagaaatc ctgaaaattttattttcccgccaaaacccaccagtaaaccactccaggtc aaaagtttgcttagATTATggaaagtttgaagccctctacaggaggtgct agagatttcatttaggggaaaattttggagactcgatttgattttttctg attccctacaaaaagttctgtaaagcagctttctaatgtactcaAATAAA AATTCgcaattggctttcaaaatctgctccctaccagagttcatgatttt tagggggtcaattttcgcttagtactaatagcctatctttgagacgctgt atcttcaaaactactcaagatatcaaggtgaaattttcagggtcttattt tcttgtgtgatagaacatttggtccaaatttcagcaaaatccaagagggt gaGTTAGgatactttctttattctgaagatttaaaaaaaaatggctctta atgcCCTAAACACACCACACAAACCACGGCCGCACAACAACCCCCCACAT CactattttcctcttttttttcctcCTAGTAAAGTTCTTCTAAGCAAACT CTTAAAAAACATTTATATCGTTTTATTTTAACTAAACTTGCATCTGAATA GACTCTGGCTATTTACTTTCCTATACTCTTTGTCTTCTTGTTTTgatctt tattattattattttttattattctcTTCCTCTGGTCTGAACTTGCAAAC TCAACTTTAGTAGTTAATGCTAAACCAAGGTTACTCCGTGGGCACTAGTT GGAACTATCTTTGTTGCCTCCCTTCCGTTTCTCATTTACTCCCTGTACTA GTATGAAATATCATAGAGATGTTTTTACAACTTGTGCTAGTATTTTTAAA CCATCCCCTCTTCTGCTGGTCCTCTCTTCTGCGCTGACATTTTTGAGTTT ATTAAATTACTTCCAACATAACTGTCCAGTATTTTTTTTatgttactttt ttctttaacgTTTTAGTGTTTTAGGATAAAAGGGCACCTCCTTCTGTCCT TCCCAGGAAGAAAAAACCCTCTGTCATTAACAGACAGTGTAGCAACTTCA ATCTTCATATGATTCATACTAAATCTTTACAGGacacgcatatttggact ttgtacccagTGCTTCACGTAAGTGTTCTTAAAGCTAAAGTCATACAGgc tattcaaaaagaaaatagtcgaaaatgaaagaaagtttacaaatcttttg aaaacGTTCTCGATCTTTCCCAAAAGTTTCAGTGAGTTTAGAGAGCGTGC CAAAACGCTCTCTGtttaaaaaactaataaataaaAGGGAGGGATCAGGA ACCTTTTGTACAATTTGTTTTACTGGAATGATCCATTCTATTTTTATCTA AAGTCGTTTTGTGATGACACGAATATCAAGGGAGATTTCTAAAAGATAAG AAAGAGAAATTGTCTGTATATAAATGAAGGAATATTGATTTCACTAAATT TTATCCGGTTTTGATCCAAGATGAGCTTCAGAGCGAGCTACCACTGAAGT AAGGAATAGTACACCTTGCATACCATGGTATTGTATTCCATAGGAAGGGA AGGTCTGTGGCTTGGAGAAATTTCTAGAAAGAAGTTTTCCATAAAACCTG AATATTCAGAGTTGTAAATatgaataaaccagccgaggctggaaggtcag ccaatatagtcgcgcggctgaggtcgaaaaaagtggctagaaaatgattt tcgtgatacacctcttagattccacttttttcgatggaaactctcgaatt agtatatgtAGATTCCAAAATCAAAAAGTTTCCACAATATTATCGTGCAA GTAACGAGTAAATGGCGActttttgcgtttccaggcaaaattgtaaggcc tggaaattcatgatttttgggggtcttcaaattaaaaaaagacctatatc acatgatagagctcttcaaactgagcaaaaaagtgtattacaccaaagtc ccaacttctctagattaaaagttatgggcctatttatggtcaaaaaggta tttaattttgcataaattaatgcagattgtggggaaattccctgttttcc atcagttttttaccacaaataggccaataaattttaaTCTAGAGaggttg ggactttggtgtaatacacttttttgctcagtttgaatagctctatcatg tgatataggtctttttttaatttgaagacccccaaaaaatcatgaatttc catgccttgcaattttgcctggaaacgcaaaaaatcgccaattactcgtt acttgcacgataatatcgtggaaactttttgattttggaatctacatNNN CTTAGCTagagatagctttaataagtgggttaacagatgtaagagatgta ctgaaacagagtagactaaaaatgttgaataatgtacaaactgtgaaaca tttgataacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNgtcatctgaccgaccctgatttacggtcagcaggt agagttggagagtcgaaaagcttttccgctgctttgctggatttccactg tcgacctctacacgctctgtgtttacaagatttcaaatcgaagtagcgag ccgcatgctaatggagagtaaactgaaaaccagtttatccacggtttctc aattttttaattcggatcagtccacacgtatttcctttcaacaagatgta gctgcttcttaacagaaaaatattttcgaacgaccgaacgacccccactt tttaaagtagaaatgacgggaaccaaacaattttttgcgattcacCTTAT CATcaaaacacgtccaagtccaaaaaaagcacgattgcatccagtcttta tcaaatttagacagtagctgtgcttttgtaaactttatcaaattccaata acattataacaccatcaataccccctagaggcaaacaagaaaaatatgtt tttattgcaaaaactaataaaaagcagcaataaaaagtatcaaaaaattc aacaaaacaaaaacttgagcaaacggctttaaaccttcaaaagatgtaga aaaagaatccccttgatgaaaatcatgtgtttgatttgccgagttaaaaa aatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNttttttgccgtcttatggtggAAGAAGAActgaattttacc tatttgaatgctcagcttaggctgaccaaaaagGCCTTTTCTAATGTGAT ATTTACAATAAAACCCTTGAATCATTTAAAAACACCAGGGTGAGGGTGCT gtcatcaaaagatttttttttaatctgccTTGAATAAAAATGGATTTGTT TGCACATTAAATGTCTGATCGTGCATTTCAGCTCTAAAAATGGATGAAGG AGATGCTAGATTAAATGATCTAGTGACTGTATCAATTGAAGTGCATTGTC CAGAGCAGGAGCATTCTTTTACCAAAGCAAAAATACATCATGATGTTACT AAAGAGATAGAATCTACTGTAATAAATAATAGTGAAGATAAATCTGGTAA AAATTTGTGTCCTTTTTGTGTTACTGGTTTCGCCAGATTGAGAGATCTTA GAACACATGTAACAAGAAAACATAGTGATATGCCAATGCCAGAGAATCTT AATACAGGAAAAACGAAATGCTTGGAATGTAATGCACGGTTTTGTCGAAC AACAGAGTTGATTTCACATTTAAAATCAGAACACAAAATGGAATTTCAGA TTGAAACGttagcttttcaaaatattgaaggTAGGCTAGATTGTTTTTGA TTAAATAACTCTGATATAAACTGATATAATCACCTTATTATTGTACACGA AAATAAGTAGACATGTATTTAGCGtgaattcaaaaatttcatgttAATTA AAACTCCTTTAATTAGGCgtctttgaaaaagcaaataaaatttatgcTAA TTTTTTGTGTGGTAATTTGAAGGTCGTTAAGTATGTGTCTACTTATTTTC ATGTGATTTTAAGGTACATCTACTGATCTTATGTTTTGTCTATCTATCta cattaaatttaaaaaagtttttttctaatcTAAAAGGTGCTTTTAGTTAG TTGTATTTTCAACCATAGCAATCTGTTATTGTTACATCATCAGGTAGATT TATATCCCCTTAGCCGTAAAAATCTAAAGCTATAcatattgaaaatttat ttatccGTTTCTTCTTTCTATCTCAAAAATTCcagagtttgaaaaatgga aggATGACTTTGAGAAGCGAAATCAATGTAGTTATACTACTTATGGatca aaacagaaaagttgtaCCTACCAAACTTATCGATGCAGTAGGAGTGGTTG GTACCGAACAAAGATAACTGAAGATGACCAAAgacaaaggaaaatgaaaa cttcAGGTGCTTATTTTATGCATATTGTATTGTAACGTGAAGAATTTATT ATGTGTATCCAAATTGTTTTAATACTATTGAAGAAGTTAAACTAGAAAAt agaaagtaataaaaaaagtAGACTTGTGATCTTGTTGTAGGTTAAATGTG ACTCCCCACGCAATTTTTAGTACATGAAAATTGGACTAGTAgcaatcaaa tttaaaatttcaaagtattGCCCAAAAGAATCTGACCTGTCCAATCTTAG GCGACCAGTTGGATGTCCTGGCTGGCTTCTTGCTTATTGGTTCATGTGTT TGTTAGTAACAGTAACTGTAATAACaacattgaaataaattttttcaaag aattttagcCAAACAATTGTTAGAATAAGCGCATCATAATGGCCAATAAA TTTAATTGTTGTCTGATTTACAGGTACTTAAAATACACTTGGAGAGTCAC AAAGTTATCTTATATATTTCATATAATTATATTTCATAGATGAAAATAAT AGAATGAAATTATAAATAATTTGTTGTCTCTTTCGTATCTTTAGGAACTA GTAAGATTGGCAATAATTGTACATCCACAATAAAAGTTCAGGACAAAGAA GATGGAACAATTGAAGCCACCATTAATATGACACATTACTCACATGACGT TGATATACAACACGCTTCACGAAAGTTAGTGActttttgttttgtctttt taggagttcctttttttttaatgtaatgAAAGCCCAACACAACAAAAGCT CACCGTCGCTGATTTCTTTCCTCATTCTCACAAAATCTTATTTTGATATT ATTCAGAGTAAGAGACTACAATATTGAACAGGGAACTACAGATTATATTT ATCCTGAGGGTAACGATCGAAGAAGGATGCATGGCAGAAAGCGTCCTTAT AAACGTAGAGgtttgtattcatgatatgcaacactggagagtcttctgag aacttttaaaattttacaccctatACATCACATAGAAAAAGTAACgtatt ggtttgaaattttttgaaaattctcagaagactctccagtgttgTATATC ATAAATTATTCTAATACTTTTCCAGGATTAAAACTTTCATGGTAAAAGAC AAATTTTACAATAATTActcattttcttgaaatttcacTGGTCATTCAGA CTGTTGGAGGACCAACCAGGTACTTTTAGGGCATACAAACGTTTCTGCTT GCAAAAGTTTGTGCCTAAAAGTACCTTGAATCACTCAGAGAATCACACAT GACTAATCAAACCCTCATTTTACAAATTACACCAAGTTGATTTCATATTT CCAAAGTATGTCTTTTTGTAAAGATTTATTTCGATTTATCTTTCAGTTAC TCCAGCACAACGTGAAGAATTCAACAATATGAAACACGAAATTCAGTTTA AGCTTTTAAAAATACAAGAACTTGTAGAATGAAGCTCAGTTAACAATTtg caaaatgtaaaaatgcttTACGATAAACTTNGGAAGCTCAGTCAACAATT tgcaaaatgtaaaaatgcttTACGATAAACTTGAGACAGCAATTACTGTA TATGAGGAAACAAATGTGCCCTAGTATGAACTGGTTCTTTTATATCATTA TTTATTTTgtacaaagttttgaaatataaaagtttattgacgCTTTACTA TTTGAAAGGTTCTAACACGTGTGCCTTATGGTAAAGCACACAAACCATTG CTGTCATAGGTCAAACTCCTTTCAAACTTGACAGGCATAAAGTTTTCTTG CCTTCATCTGTGTCCAGACAAGATAAATATGCCACATTTTGGATGGGCTT GTTTTTCTGTAAATTCATTATACTGCTAACTTTGAGGCTGTaagttatct ttcca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017673TCONS_00017673Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017673-proteinTCONS_00017673-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273supercontigsc0000273:203633..215137 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.34 12.54 8.69 8.15 10.71 8.14 10.11 11.26 10.13 7.58 13.17 13.25 11.23 12.35 11.19 10.09 10.56 13.3 13.63 12.39 14.86 14.13 17.15 17.58 15.69 17.52 10.14 11.2 10.79 10.62