TCONS_00017673-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017673-protein
Unique NameTCONS_00017673-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length293

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017673-protein ID=TCONS_00017673-protein|Name=TCONS_00017673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
MDEGDARLNDLVTVSIEVHCPEQEHSFTKAKIHHDVTKEIESTVINNSED
KSGKNLCPFCVTGFARLRDLRTHVTRKHSDMPMPENLNTGKTKCLECNAR
FCRTTELISHLKSEHKMEFQIETLAFQNIEEFEKWKDDFEKRNQCSYTTY
GSKQKSCTYQTYRCSRSGWYRTKITEDDQRQRKMKTSGTSKIGNNCTSTI
KVQDKEDGTIEATINMTHYSHDVDIQHASRKVRDYNIEQGTTDYIYPEGN
DRRRMHGRKRPYKRRVTPAQREEFNNMKHEIQFKLLKIQELVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009885XLOC_009885Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017673TCONS_00017673Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 92..115
e-value: 0.33
score: 20.0
coord: 55..78
e-value: 5.2
score: 15.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 94..115
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 92..120
score: 9.286
NoneNo IPR availableGENE3D3.30.160.60coord: 71..107
e-value: 1.0E-5
score: 25.3
coord: 19..70
e-value: 0.14
score: 12.1
NoneNo IPR availableGENE3D3.30.160.60coord: 108..263
e-value: 0.096
score: 12.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..262

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017673-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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