TCONS_00016104 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00016104
Unique Name	TCONS_00016104
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1305

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000226:331281..341438+
coding sequence from alignment at sc0000226:331281..341438+

transcript sequence

>TCONS_00016104 ID=TCONS_00016104|Name=TCONS_00016104|organism=Clytia hemisphaerica|type=transcript|length=1305bp
ggaagcttggaaaaaggcCACACGTACGATGTGGTGAAACACAGATTGCA
TCATTGACAGATATACACGATCCCGACGAAACTAATGttcgaaaagaaaa
tgaaaatattgtctgTTCCAGTCCACTTGTGGTGCAAGAATTTCCAGACG
ATAAAAACAATGAAGAAAGTACCACAGAAAATGTAAACTATTTGAAAATC
GGTCGTGGACCTGATAGAGAGAATCCAAAGGTTGATTCTCAAAAGGTTGA
AAATGAACATGATGCTACTCTACAACATAAAGCCCGTGAAGCTACTTCGC
CACATAAAcgtcaaaagaaaaacttagtCAGCATGGACAGCCTTGATACA
GATATCCAAAGCCCACGATCAcggaaaaacagtttttcagaCCTCCAAAA
AGAAGCTGTGCAGAAAATTAAACGTAAAACCTCCAACTTGGTCGCACCAA
ACAATCATGACATCGTGGTGTATTGCAAAACCTTGATTAACGTCAGCTTT
CACGGGCAAGTTGTTTTGAAAGCTAAAATGGAACTGTATCATTTGTTAGA
CGAAGGTGAATCGTTCACCTTGGCAGTATTACTGCAAAGTCTCCACAAGT
TCTTGCAATCCTTCTCCAACGTTGATGACATCACTGGTGAAGAAGAGGAA
TATCGGTATTACATCCAAGGATTAATGGAACGAAGGAACCAAAACGACAT
GGAGAAGTTCTGGAAAGATGCGATGAAATTCATTGATATTTATAAACAAA
GAGGGGTACAATCAGAAGATTTGAATCACACGAATTACTGGGGAACACGC
CAACAATTACTTGCTGGTAAAGTTATTGCTGACCACGTGGACAAAAGCTA
TGGTTCACTGGATCCGATATTTGGTATCCTCTTATGCCCTGTAGCTGGGC
GTGCAGGACCCGGAGACAGTGGTATAGTACACAATATCTTATTCGATGAT
GATGGTCCACTTGCATACCACTCTGCAGCTCACGATGCTTTCGGTTACTT
GATCACCCACCACGATGTTGGTCCTGGTTACAACTACCTTGGTGCATGCG
GTGAGGTTCTGGATGCTTCCAGATGTATGTCTGGTCAAATTTCTGGTTTA
CTGTTTTGGAAAGATGTTCTTAAGACTGATAAAACTGATTACAAGTACGC
TGTAACTTAACACTTTGTTATTCATACGCCAATATGTAAATTTAAATATT
GACACAAATAATATATCTTAtgcaattaatgtaatttaattaCTTTATAT
GATAATAAtacaatttttgaaacaataagGTAAACGATTTTCCTTTATAG
TTTGC

Run BLAST on NCBI

protein sequence of TCONS_00016104-protein

>TCONS_00016104-protein ID=TCONS_00016104-protein|Name=TCONS_00016104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=385bp
KLGKRPHVRCGETQIASLTDIHDPDETNVRKENENIVCSSPLVVQEFPDD
KNNEESTTENVNYLKIGRGPDRENPKVDSQKVENEHDATLQHKAREATSP
HKRQKKNLVSMDSLDTDIQSPRSRKNSFSDLQKEAVQKIKRKTSNLVAPN
NHDIVVYCKTLINVSFHGQVVLKAKMELYHLLDEGESFTLAVLLQSLHKF
LQSFSNVDDITGEEEEYRYYIQGLMERRNQNDMEKFWKDAMKFIDIYKQR
GVQSEDLNHTNYWGTRQQLLAGKVIADHVDKSYGSLDPIFGILLCPVAGR
AGPGDSGIVHNILFDDDGPLAYHSAAHDAFGYLITHHDVGPGYNYLGACG
EVLDASRCMSGQISGLLFWKDVLKTDKTDYKYAVT

Run BLAST on NCBI

transcript from alignment at sc0000226:331281..341438+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00016104 ID=TCONS_00016104|Name=TCONS_00016104|organism=Clytia hemisphaerica|type=transcript|length=10158bp|location=Sequence derived from alignment at sc0000226:331281..341438+ (Clytia hemisphaerica)
ggaagcttggaaaaaggcCACACGTACGGTAGGTAATTTACCTTGAGTGT
CCCCCCCGGTCCTGGTCCCGCCAGTAATATGATTACGTAATATTATGTAT
CACACACAACACATACATGCCACAGGAATTTTTTTAGGTCTACATAAATC
ATTAACTTTTCTTGTGCAACTTTTTGACAGAAGGGAAAAATAAACGAGAA
AAGAATAAGAATAGAAAAGTAGgagaaataaaacaaaccagcaagaaatc
atattttatgcaaaatttatttttcaaatcaaaagttatggttaAAAAAA
GGGGGAGAGAATTTTCCCTTTTCTCTGCTTTactaataaaatagatttaG
ATACTGAAGCTAGGGAAATATAAGAAAAATTGGCAGAAGTGAAGGAAGCA
AAGGGAAATATGGTcactaaaaaaataaagaattgaaaaattgataataa
aGACCTGATGGTTTAGAACAGGGCaaacctttttttcaaataatacaACT
AGATAGTGATTCATATGATTCAGAGTAGAAATCCTTCTGAATTTTTCTCT
AATGATCACCATTTTCTAACGATATGGGGAATGAAGTGTGTAAAGATGGA
GCACTCGATTCTAACTTAATACACCCACAACCCAATAATACCAGTGGTTT
TGCAGAGACTACAAAATTATCTGACAGATGTGGTGAAACACAGATTGCAT
CATTGACAGATATACACGATCCCGACGAAACTAATGttcgaaaagaaaat
gaaaatattgtctgTTCCAGTCCACTTGTGGTGCAAGAATTTCCAGACGA
TAAAAACAATGAAGAAAGTACCACAGAAAATGTAAACTATTTGAAAATCG
GTCGTGGACCTGATAGAGAGAATCCAAAGGTTGATTCTCAAAAGGTTGAA
AATGAACATGATGCTACTCTACAACATAAAGCCCGTGAAGCTACTTCGCC
ACATAAAcgtcaaaagaaaaacttagtCAGCATGGACAGCCTTGATACAG
ATATCCAAAGCCCACGATCAcggaaaaacagtttttcagaCCTCCAAAAA
GAAGCTGTGCAGAAAATTAAACGTAAAACCTCCAACTTGGTCGCACCAAA
CAATCATGACATCGTGGTGTATTGCAAAACCTTGATTAACGTCAGCTTTC
ACGGGCAAGTTGTTTTGAAAGCTAAAATGGAACTGTATCATTTGTTAGAC
GAAGGTATGAATGACCATTTCCGATGGATGATAATTGCTTTTTTGAGACA
TGATGATAATTTCAGGCATTGCCAAAAGGAAATTTGGAATGTTTTGTCCA
TAACACGGGTATCCTTGAAACTTACTCCCAATTACTTACGCTGTAACTTT
TTACCTACTTCGAACAGATTTTGAGTGAGTCGACAGACAGGGACAAAGAT
ATATTATTTTAATAAGTTATATTTTCCCATCGACCATTATATTTAACTCT
CCCAGTTCCCAGTAATATGTGTGTACCTCTCGACTTACAGGGATTATAAA
CACTGTCCAGTCTacgtactcttgtctcccgaatagacggggggNtttca
aatcaaaagttatggttaAAAAAAGGGGGAGAGAATTTTCCCTTTTCTCT
GCTTTactaataaaatagatttaGATACTGAAGCTAGGGAAATATAAGAA
AAATTGGCAGAAGTGAAGGAAGCAAAGGGAAATATGGTcactaaaaaaat
aaagaattgaaaaattgataataaaGACCTGGTGGTTTAGAACAGGGCaa
acctttttttcaaataatacaACTAGATAGTGATTCATATGATTCAGAGT
AGAAATCCTTCTGAATTTTTCTCTAATGATCACCATTTTCTAACGATATG
GGGAATGAAGTGTGTAAAGATGGAGCACTCGATTCTAACTTAATACACCC
ACAACCCAATAATACCAGTGGTTTTGCAGAGACTACAAAATTATCTGACA
GATGTGGTGAAACACAGATTGCATCATTGACAGATATACACGATCCCGAC
GAAACTAATGttcgaaaagaaaatgaaaatattgtctgTTCCAGTCCACT
TGTGGTGCAAGAATTTCCAGACGATAAAAACAATGAAGAAAGTACCACAG
AAAATGTAAACTATTTGAAAATCGGTCGTGGACCTGATAGAGAGAATCCA
AAGGTTGATTCTCAAAAGGTTGAAAATGAACATGATGCTACTCTACAACA
TAAAGCCCGTGAAGCTACTTCGCCACATAAAcgtcaaaagaaaaacttag
tCAGCATGGACAGCCTTGATACAGATATCCAAAGCCCACGATCAcggaaa
aacagtttttcagaCCTCCAAAAAGAAGCTGTGCAGAAAATTAAACGTAA
AACCTCCAACTTGGTCGCACCAAACAATCATGACATCGTGGTGTATTGCA
AAACCTTGATTAACGTCAGCTTTCACGGGCAAGTTGTTTTGAAAGCTAAA
ATGGAACTGTATCATTTGTTAGACGAAGGTATGAATGACCATTTCCGATG
GATGATAATTGCTTTTTTGAGACATGATGATAATTTCAGGCATTGCCAAA
AGGAAATTTGGAATGTTTTGTCCATAACACGGGTATCCTTGAAACTTACT
CCCAATTACTTACGCTGTAACTTTTTACCTACTTCGAACAGATTTTGAGT
GAGTCGACAGACAGGGACAAAGATATATTATTTTAATAAGTTATATTTTC
CCATCGACCATTATATTTAACTCTCCCAGTTCCCAGTAATATGTGTGTAC
CTCTCGACTTACAGGGATTATAAACACTGTCCAGTCTacgtactcttgtc
tcccgaatagacggggggtccgaataagcaggggggtaggaaaattttct
aatttctaataagtgggggatggaataagaggggggggggggaatttttt
tttttttttttttaacattaggggggggggggttttttgggttttttttt
ttttttttttcttaacaattagcggggggacgtttattcgggagacaaga
gtagtatatatctttcttttgatataatttCAGGTGAATCGTTCACCTTG
GCAGTATTACTGCAAAGTCTCCACAAGTTCTTGCAATCCTTCTCCAACGT
TGATGACATCACTGGTGAAGAAGAGGAATATCGGTATTACATCCAAGGAT
TAATGGAACGAAGGAACCAAAACGACATGGAGAAGTTCTGGAAAGATGCG
ATGAAATTCATTGATATTTATAAACAAAGAGGGGGTTAGTATTTCATTGT
TTGCATTTATAACTTTACTCTTACGTTCCAAATAAACGAGAGAGGATTCG
AATAAACCTCCCCGGTGGTTGGGAAGTTTAATagacggggggacctaatt
gtcAGGGGTTTTGTATTActgaaaacctaaaaacaaggtaaacaagacga
ctcagagtcgaaaatttcgcaaagtatttgattatagtaggggccactat
gtTGCGAAAAAGCTTCTCGTGTGCAGCAgattgtgcaaagggattttatg
attgaatattgttccttgagtgtaaagatcaaaatttgagaggtgtgGCC
GGGTGTGACCACCCACTGCCATGAAAACTggcgtcattggttactatggc
aaccaaagtaaaaagtcgttaaaattgaaaaattttgtttcatttgtaag
agcatgaaaaactgataaagaaaaaggtcacaacttCACCattaaaataa
ttcaataaataGAACGGGGCTATATAAAGCTCTAGCCCCGTTCTATTTAT
TGCATTATTTTGTCACCCAAATGTGAACTGTCCCAGTGTGACCAAGTTAG
ATATCAATATCTTtgactatttacaaaaatattaaaatgtttaAACCTTg
taaataaatcaaaaacatagtttctcaatatttcaaaaactttttattca
tATAGATTGGTAACCTCTAATATATCTGTCAaattccaacggtatataac
ttTCTACTTTAGCATAACTTGGTGCTGagaatttgtttgaaaagtaaagt
atctacatacttttgagacgACAGACTTTAATGACAGATACATAATATAT
ACTCAATAAAAGTcaaaatctcaatcaaacaaaatcaaacacaatcaact
tTGGCGGGCATTTATTTTGCTGATgccttgaaaaattaaaattaaaatat
tactTTGAGATCAAAAAATAACTGTTTCAAGGCTCgaaaagcacaaattt
ggaaaattacataaatattttaaatttgatggaaattaatttaaattttt
aaggccaattttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTTTTATCAATAACCAATCAATTTGTTCCAA
TATTCGATAGGTAATGAAGCCcattagaaaattttgagtattgATCATTG
ATTGGATTTGAATGATAGCATAACATTATCGAATACCTATCAATTACTGt
acgttggtctaatgtcaacatcccccctctaatttcaacatccttcttta
aagataggaataattGGAAGGACAGAATCGCTGaaggaaactatttttct
ttgcctaGCTATCAGAGAAGAAAATACCTTTTGTCTATAAGTGATCCCAA
CCtttctattattcctatctgtaaagaaggatgtcggaattagaacaggg
atgtcgacattaaaccaacttacggtaccagAAGGAATCGATATCCAGTC
AATTGATTTGTTATCGATGTGTCATTGATAGAAAATGAATCAATTGTTTT
GAGTGGGAGTCTGGCACTGTATAAAAAAGTTCGTCTTTTGAGTTATATAT
TTGATcaatcaaaactttcaaatccATTGTACAGTATTCAATCATAGTTT
ATACAAATTTTACAGTAAGATTTTGATATAGACTTCAACAACAGTCTTGC
CGTTTTCCCTCGCATCCATATTTGGGTTGACCGAGTGAAGGCTCGTACAC
tttccaagtgaaccgctgtgagtgggaatcgtAAACTTTGACGCCTGCGT
AGCAATCAAGGTAACTTTTTCCAATCGATgactaatcgataaataatcga
tggaTTGAATATCGTTTGATTTAGATAATTGATagacaatacacctttcc
cgtaattcgtaaaactaatgcgcgcaaattattttgatgctctccaccgt
ttggtctctggaggtaaacaaacccgtttttgcctgcgttcccttaggga
aagttggttttttgagcttttcttcagttctgtcgaacaaattcctcaaa
ttttagtatgttcaatctattcatgatattataccacgctgaaaatattt
tgccaaaagaagatcgctgtcaaaagttagaggcttaaatcccactttcc
ctaacccctagcaggcaaaaacgcgttttttacctcccaaacaattttat
acacaaataTTCTAAAGATGTTCGATTCATCACAATTGACAGCCAATTTA
TTCCAATCGATTAAAAAACCAATCTATTATCAGTTAGAATAGTCTTGATG
ATCGAAATCAATCGACATCCAATCAATCGGTTGGTTATCAATTAGTCATC
GATTGACATTTCGAGCCTGGAAAATGACAATTTAACACATCGCACCTACC
TAGCTAGCAAAAGGTAACTTCTATCAGATTGACACCCCTTGCTATAAATT
CTTCTGTGAAATACTGAGTAAATGATTATCTGTCTTACAACACAACttaa
tcaaatatcaacaaataattctACTTGAActtgtaaaaatgaagatcata
cctGTCTGTGTTGTCTGTATTATTGTGTGTAGTGTCGATGGTGTAGTGAT
GTTCAAGAGCAACTCTAATTGTAAGATTCCTAtcactttattggtgcatt
tactaactacacaaacataaaatactatgctaaaagaaatataaacctct
ttaagtactctaaaaacatcaacatgataaaaatacaaaaatccagAGCA
AGTCTGACAGCATAATAGAatctgccattttgaaaaacgatATAAATGTT
TACGAATGCTTGGTTCCACCTACCTTGCACTTTGCAGACtggaatcatta
aattttattttagcgaGTGAGTCCATATGTTAGAATCttcgagaatgttc
tagaagtttcaactactttcgttttctaattttttttccgcacCACCGCC
GCCACCGCGAAAGcctattgtaatactttcgctaagcgaaattaataaag
gCTAAAATTctggctatttagagcaaaatcaGGGACCTTCTCTTtcacag
ctgaaaatattcttaaatccTTAAATAttcggggggttggaaaattctcg
aaaaattaacaagcagtggggcgtttatttggaacctaagagtacgattc
ttttaattttctttcttttcacatttttctaTCTGTCTTCAGTGCTGTGC
TGATCCCTCTGCTTTAAAATATGACTGATTCCGTGTGTTAAGGTAATGAA
ATAACCAAATGTATCCCAAATAGTCGTGGTAATAATTTCGACTTCCATTC
CATTTAAGACCCCATTAAACGTCTGTATTTAGCTAAATAGGATAAGTTAT
TCAATAACTTTCGCGTTGTTGCTACGCTCGTAATCTTTTGAAAGGCGCCA
AAATATCAAAAGTGACTTCGCCTCCCATGTTTTCCCCAATTTTAACAAGT
CATATAGAGTTACTGCATTCATTTGTTACATAAAATTTGTTTGGCAACAC
TTATCATTTCTTTTTAGTACAATCAGAAGATTTGAATCACACGAATTACT
GGGGAACACGCCAACAATTACTTGCTGGTAAAGTTATTGCTGACCACGTG
GACAAAAGCTATGGTTCACTGGATCCGATATTTGGTATCCTCTTATGCCC
TGTAGCTGGTGAGTTAAACATAAGATGAGCTCTTatttacatgtttttat
aaggaaaaactatataagaacataaggcttcgatggccaaattgttaaga
acaagttaagaacattctaaggctttttggactctaaaacagtcaatttc
taaagaaaatcaacaaaaatgttaaaaaatggttaaaataaacaacaaca
attttaggcttgaaactgagAAAGTTAAGACAATCCGAAggcctcaaaaa
ttttgaacgttcttatagaaaaacgtgtattggcTAAAAATTGACGTATA
GTAGAGTCTATATCCTGAGTATCACATCGAGAGTCGATGTTCGATTCATC
GGGAAAAAAGCATCCATGGCAGCCAGATCTTGTTCCAGACTTCAAAATCT
GCCCCTTCAAGTAGTTCAGTATACTAAACTCGATACTAAAGACCATGTTC
ATACGTTACGGCCTCGTATTGTTCCGTAAAAAAACGTTCCTATACATACT
GTGTGAACTTTAAGAATCGAAACATCAAACACCATTACGGAgcgatacga
aaccgtaacTTCTGAAAATGGTCTAATATCTCAGACATCATGatgtttag
tgacgtggtggtacccaaaaagttaaaaatcgaAATCCTTGCACTCTCAC
GCAGTGCTTTTACAAGCCTGGCGTTTTTTTTTGCCGAGAGGTATCACAGC
GCGTAATCACAATTGCCGGTTGACTGAGACAGGAATGTATTGCAATCTGA
ACTGGAAATCAAAAGCAACGGACACGAGATAATTTCATATAGGATCAAGa
ggaaattattatttttttgtttcgtttttgtTGTTGGCTGCATATTGCCT
GCCTGTTTTTAGTCTATTTTGGAGGTTTGTAGCTTTTAaacctttaagtg
ccaatgtcagGTATATcggacatgggctatatagtttaatgcccagtttg
atttagaaatcgtcaaaaaaatgcattaatttgacaaaaatccctttttt
tagagatttttggtcaacgagtgaacCAAGagcctccaaatttggccctg
ttttactttattctgttcTCTAgcaaattgatttgaagttttaccacttt
TACTGGACACCTTTCCGTCATTAATTCCTATAATTCACTCCACACTTAGC
CGCCACCCAccccgcccttcctaaatcggaaaagaaagaagagactctaa
gctctaagctatccaacgagctatgaacGAGCTTCAAAtaccttctagat
ccggagatataagcttTTTTCAGCAAAGACTTATTAAACAGTTTAAATCT
ACTCGGTTGAATAGtgtgattttaaaaatcttaactAAAAGCCGCACAGA
AAGAAGACCATCAAAGCTTCATGCCAAAAACCCTGAGAAAATAAAACAGT
TACCGGAAATTCGATCTGTCATTGTTGTTGTACCTTATGACGTCAGTGAT
TAGAAAAGTTCCCAAAACTGtaatgattttaaaatgatGGCGATTTCGAA
ATCAAAGTCGAAACCACTCAAGATTACCACATTACCCGATTTAAGTAGAG
TCAAGTAGAGTCGTACATAAGTTTTAGCTAAGTGACGTCCGACAAATTAA
CTGTGGGGAATTTTCCAAATTCGcaattttttcgttttctttattCCATT
TGAAGGGAAACTTCACTTTCTGCTATTTCCAGTTTTCTGAAGTACATTTT
ATTAATTTGCTTTATTGCTTTAACATAAAGCTTTAGGTAATCATGTGATT
ATCTGCTATTATTgatctaaattttcaaaaacggaAAATACTAATTTTGG
TAATTTGATGAAAGACTTTTTCATTACGAGCATTTCCATCTTACATCTCA
ATTTAATGCAATATTTTCACAACCAGTAATTCCGGTCAACCCTGATTTGT
TTCCGGAAATAATAATCTGAGTTAGATTCTAAATGGAAAAGACCGTACAA
TTATGTTTAATTTTGGCCATCGAGTTTTCGTCGTACTGTCATTTTCTCTT
CAAAGTTCAATTGATGGTATGTCTGActaaattcttttaaaagacatcat
taaaaaaaaatttaacatctTGGAATTCAatcgaaagtttgactttcagg
ACTCCTGTGGCCATTCAATTGTATCAATCGGTACGCTCAATTTTATGTGA
ATTCCAAAAGTGCtatgaaaaagaaagcaaaactTTCTGTAGTTGCAAAA
ATTGTGGCCCTTTGAAGTTACTACCAGCTACCTGTAATTTGACCCCTCTA
CTACGAGTATACTAGTAACCAGCAGTGAATGTGTCAACATATCTTCTGTC
ATTTGCTTATATAGCACTTTTAAACAAAATGAACAGCAATTTTCACGCGA
ATTTCCCCTTCATGTGTTGCACTTGcacaaattttaaaaaaatatttagt
ttattttgctttgtcagcatGAGGTGCCTCTCCtctctttatattttttt
aattagacATCGCATTTCCTTTGTTTCAATAAGATATCCCAATACAAAAA
CTTAGAGGTTGTTACTCCTGCTTTGTTGGATCGCCAAGTCTTAAGGATAA
TCTTTCCATTCAAGCCCAGGAAGAACCCAGTAGGGTTAACCAGGAATAgt
gaatagtgaatttttttctactttattATTTCTGAACACAAATGTTTTCT
GGACTAACTCGTTTCGATTGACACTTAGAttttatttgtttaattttcAG
GGCGTGCAGGACCCGGAGACAGTGGTATAGTACACAATATCTTATTCGAT
GATGATGGTCCACTTGCATACCACTCTGCAGCTCACGATGCTTTCGGTTA
CTTGATCACCCACCACGATGTTGGTCCTGGTTACAACTACCTTGGTGCAT
GCGGTGAGGTTCTGGATGCTTCCAGATGTATGTCTGGTCAAATTTCTGGT
TTACTGTTTTGGAAAGATGTTCTTAAGACTGATAAAACTGATTACAAGTA
CGCTGTAACTTAACACTTTGTTATTCATACGCCAATATGTAAATTTAAAT
ATTGACACAAATAATATATCTTAtgcaattaatgtaatttaattaCTTTA
TATGATAATAAtacaatttttgaaacaataagGTAAACGATTTTCCTTTA
TAGTTTGC

Coding sequence (CDS) from alignment at sc0000226:331281..341438+

>TCONS_00016104 ID=TCONS_00016104|Name=TCONS_00016104|organism=Clytia hemisphaerica|type=CDS|length=5790bp|location=Sequence derived from alignment at sc0000226:331281..341438+ (Clytia hemisphaerica)
aagcttggaaaaaggcCACACGTACGATGTGGTGAAACACAGATTGCATC
ATTGACAGATATACACGATCCCGACGAAACTAATGttcgaaaagaaaatg
aaaatattgtctgTTCCAGTCCACTTGTGGTGCAAGAATTTCCAGACGAT
AAAAACAATGAAGAAAGTACCACAGAAAATGTAAACTATTTGAAAATCGG
TCGTGGACCTGATAGAGAGAATCCAAAGGTTGATTCTCAAAAGGTTGAAA
ATGAACATGATGCTACTCTACAACATAAAGCCCGTGAAGCTACTTCGCCA
CATAAAcgtcaaaagaaaaacttagtCAGCATGGACAGCCTTGATACAGA
TATCCAAAGCCCACGATCAcggaaaaacagtttttcagaCCTCCAAAAAG
AAGCTGTGCAGAAAATTAAACGTAAAACCTCCAACTTGGTCGCACCAAAC
AATCATGACATCGTGGTGTATTGCAAAACCTTGATTAACGTCAGCTTTCA
CGGGCAAGTTGTTTTGAAAGCTAAAATGGAACTGTATCATTTGTTAGACG
AAGGTGAATCGTTCACCTTGGCAGTATTACTGCAAAGTCTCCACAAGTTC
TTGCAATCCTTCTCCAACGTTGATGACATCACTGGTGAAGAAGAGGAATA
TCGGTATTACATCCAAGGATTAATGGAACGAAGGAACCAAAACGACATGG
AGAAGTTCTGGAAAGATGCGATGAAATTCATTGATATTTATAAACAAAGA
GGGGTACAATCAGAAGATTTGAATCACACGAATTACTGGGGAACACGCCA
ACAATTACTTGCTGGTAAAGTTATTGCTGACCACGTGGACAAAAGCTATG
GTTCACTGGATCCGATATTTGGTATCCTCTTATGCCCTGTAGCTGGGCGT
GCAGGACCCGGAGACAGTGGTATAGTACACAATATCTTATTCGATGATGA
TGGTCCACTTGCATACCACTCTGCAGCTCACGATGCTTTCGGTTACTTGA
TCACCCACCACGATGTTGGTCCTGGTTACAACTACCTTGGTGCATGCGGT
GAGGTTCTGGATGCTTCCAGATGTATGTCTGGTCAAATTTCTGGTTTACT
GTTTTGGAAAGATGTTCTTAAGACTGATAAAACTGATTACAAGTACGCTG
TAACTTAAaagcttggaaaaaggcCACACGTACGATGTGGTGAAACACAG
ATTGCATCATTGACAGATATACACGATCCCGACGAAACTAATGttcgaaa
agaaaatgaaaatattgtctgTTCCAGTCCACTTGTGGTGCAAGAATTTC
CAGACGATAAAAACAATGAAGAAAGTACCACAGAAAATGTAAACTATTTG
AAAATCGGTCGTGGACCTGATAGAGAGAATCCAAAGGTTGATTCTCAAAA
GGTTGAAAATGAACATGATGCTACTCTACAACATAAAGCCCGTGAAGCTA
CTTCGCCACATAAAcgtcaaaagaaaaacttagtCAGCATGGACAGCCTT
GATACAGATATCCAAAGCCCACGATCAcggaaaaacagtttttcagaCCT
CCAAAAAGAAGCTGTGCAGAAAATTAAACGTAAAACCTCCAACTTGGTCG
CACCAAACAATCATGACATCGTGGTGTATTGCAAAACCTTGATTAACGTC
AGCTTTCACGGGCAAGTTGTTTTGAAAGCTAAAATGGAACTGTATCATTT
GTTAGACGAAGGTGAATCGTTCACCTTGGCAGTATTACTGCAAAGTCTCC
ACAAGTTCTTGCAATCCTTCTCCAACGTTGATGACATCACTGGTGAAGAA
GAGGAATATCGGTATTACATCCAAGGATTAATGGAACGAAGGAACCAAAA
CGACATGGAGAAGTTCTGGAAAGATGCGATGAAATTCATTGATATTTATA
AACAAAGAGGGGTACAATCAGAAGATTTGAATCACACGAATTACTGGGGA
ACACGCCAACAATTACTTGCTGGTAAAGTTATTGCTGACCACGTGGACAA
AAGCTATGGTTCACTGGATCCGATATTTGGTATCCTCTTATGCCCTGTAG
CTGGGCGTGCAGGACCCGGAGACAGTGGTATAGTACACAATATCTTATTC
GATGATGATGGTCCACTTGCATACCACTCTGCAGCTCACGATGCTTTCGG
TTACTTGATCACCCACCACGATGTTGGTCCTGGTTACAACTACCTTGGTG
CATGCGGTGAGGTTCTGGATGCTTCCAGATGTATGTCTGGTCAAATTTCT
GGTTTACTGTTTTGGAAAGATGTTCTTAAGACTGATAAAACTGATTACAA
GTACGCTGTAACTTAAaagcttggaaaaaggcCACACGTACGATGTGGTG
AAACACAGATTGCATCATTGACAGATATACACGATCCCGACGAAACTAAT
GttcgaaaagaaaatgaaaatattgtctgTTCCAGTCCACTTGTGGTGCA
AGAATTTCCAGACGATAAAAACAATGAAGAAAGTACCACAGAAAATGTAA
ACTATTTGAAAATCGGTCGTGGACCTGATAGAGAGAATCCAAAGGTTGAT
TCTCAAAAGGTTGAAAATGAACATGATGCTACTCTACAACATAAAGCCCG
TGAAGCTACTTCGCCACATAAAcgtcaaaagaaaaacttagtCAGCATGG
ACAGCCTTGATACAGATATCCAAAGCCCACGATCAcggaaaaacagtttt
tcagaCCTCCAAAAAGAAGCTGTGCAGAAAATTAAACGTAAAACCTCCAA
CTTGGTCGCACCAAACAATCATGACATCGTGGTGTATTGCAAAACCTTGA
TTAACGTCAGCTTTCACGGGCAAGTTGTTTTGAAAGCTAAAATGGAACTG
TATCATTTGTTAGACGAAGGTGAATCGTTCACCTTGGCAGTATTACTGCA
AAGTCTCCACAAGTTCTTGCAATCCTTCTCCAACGTTGATGACATCACTG
GTGAAGAAGAGGAATATCGGTATTACATCCAAGGATTAATGGAACGAAGG
AACCAAAACGACATGGAGAAGTTCTGGAAAGATGCGATGAAATTCATTGA
TATTTATAAACAAAGAGGGGTACAATCAGAAGATTTGAATCACACGAATT
ACTGGGGAACACGCCAACAATTACTTGCTGGTAAAGTTATTGCTGACCAC
GTGGACAAAAGCTATGGTTCACTGGATCCGATATTTGGTATCCTCTTATG
CCCTGTAGCTGGGCGTGCAGGACCCGGAGACAGTGGTATAGTACACAATA
TCTTATTCGATGATGATGGTCCACTTGCATACCACTCTGCAGCTCACGAT
GCTTTCGGTTACTTGATCACCCACCACGATGTTGGTCCTGGTTACAACTA
CCTTGGTGCATGCGGTGAGGTTCTGGATGCTTCCAGATGTATGTCTGGTC
AAATTTCTGGTTTACTGTTTTGGAAAGATGTTCTTAAGACTGATAAAACT
GATTACAAGTACGCTGTAACTTAAaagcttggaaaaaggcCACACGTACG
ATGTGGTGAAACACAGATTGCATCATTGACAGATATACACGATCCCGACG
AAACTAATGttcgaaaagaaaatgaaaatattgtctgTTCCAGTCCACTT
GTGGTGCAAGAATTTCCAGACGATAAAAACAATGAAGAAAGTACCACAGA
AAATGTAAACTATTTGAAAATCGGTCGTGGACCTGATAGAGAGAATCCAA
AGGTTGATTCTCAAAAGGTTGAAAATGAACATGATGCTACTCTACAACAT
AAAGCCCGTGAAGCTACTTCGCCACATAAAcgtcaaaagaaaaacttagt
CAGCATGGACAGCCTTGATACAGATATCCAAAGCCCACGATCAcggaaaa
acagtttttcagaCCTCCAAAAAGAAGCTGTGCAGAAAATTAAACGTAAA
ACCTCCAACTTGGTCGCACCAAACAATCATGACATCGTGGTGTATTGCAA
AACCTTGATTAACGTCAGCTTTCACGGGCAAGTTGTTTTGAAAGCTAAAA
TGGAACTGTATCATTTGTTAGACGAAGGTGAATCGTTCACCTTGGCAGTA
TTACTGCAAAGTCTCCACAAGTTCTTGCAATCCTTCTCCAACGTTGATGA
CATCACTGGTGAAGAAGAGGAATATCGGTATTACATCCAAGGATTAATGG
AACGAAGGAACCAAAACGACATGGAGAAGTTCTGGAAAGATGCGATGAAA
TTCATTGATATTTATAAACAAAGAGGGGTACAATCAGAAGATTTGAATCA
CACGAATTACTGGGGAACACGCCAACAATTACTTGCTGGTAAAGTTATTG
CTGACCACGTGGACAAAAGCTATGGTTCACTGGATCCGATATTTGGTATC
CTCTTATGCCCTGTAGCTGGGCGTGCAGGACCCGGAGACAGTGGTATAGT
ACACAATATCTTATTCGATGATGATGGTCCACTTGCATACCACTCTGCAG
CTCACGATGCTTTCGGTTACTTGATCACCCACCACGATGTTGGTCCTGGT
TACAACTACCTTGGTGCATGCGGTGAGGTTCTGGATGCTTCCAGATGTAT
GTCTGGTCAAATTTCTGGTTTACTGTTTTGGAAAGATGTTCTTAAGACTG
ATAAAACTGATTACAAGTACGCTGTAACTTAAaagcttggaaaaaggcCA
CACGTACGATGTGGTGAAACACAGATTGCATCATTGACAGATATACACGA
TCCCGACGAAACTAATGttcgaaaagaaaatgaaaatattgtctgTTCCA
GTCCACTTGTGGTGCAAGAATTTCCAGACGATAAAAACAATGAAGAAAGT
ACCACAGAAAATGTAAACTATTTGAAAATCGGTCGTGGACCTGATAGAGA
GAATCCAAAGGTTGATTCTCAAAAGGTTGAAAATGAACATGATGCTACTC
TACAACATAAAGCCCGTGAAGCTACTTCGCCACATAAAcgtcaaaagaaa
aacttagtCAGCATGGACAGCCTTGATACAGATATCCAAAGCCCACGATC
AcggaaaaacagtttttcagaCCTCCAAAAAGAAGCTGTGCAGAAAATTA
AACGTAAAACCTCCAACTTGGTCGCACCAAACAATCATGACATCGTGGTG
TATTGCAAAACCTTGATTAACGTCAGCTTTCACGGGCAAGTTGTTTTGAA
AGCTAAAATGGAACTGTATCATTTGTTAGACGAAGGTGAATCGTTCACCT
TGGCAGTATTACTGCAAAGTCTCCACAAGTTCTTGCAATCCTTCTCCAAC
GTTGATGACATCACTGGTGAAGAAGAGGAATATCGGTATTACATCCAAGG
ATTAATGGAACGAAGGAACCAAAACGACATGGAGAAGTTCTGGAAAGATG
CGATGAAATTCATTGATATTTATAAACAAAGAGGGGTACAATCAGAAGAT
TTGAATCACACGAATTACTGGGGAACACGCCAACAATTACTTGCTGGTAA
AGTTATTGCTGACCACGTGGACAAAAGCTATGGTTCACTGGATCCGATAT
TTGGTATCCTCTTATGCCCTGTAGCTGGGCGTGCAGGACCCGGAGACAGT
GGTATAGTACACAATATCTTATTCGATGATGATGGTCCACTTGCATACCA
CTCTGCAGCTCACGATGCTTTCGGTTACTTGATCACCCACCACGATGTTG
GTCCTGGTTACAACTACCTTGGTGCATGCGGTGAGGTTCTGGATGCTTCC
AGATGTATGTCTGGTCAAATTTCTGGTTTACTGTTTTGGAAAGATGTTCT
TAAGACTGATAAAACTGATTACAAGTACGCTGTAACTTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_009005	XLOC_009005	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00016104-protein	TCONS_00016104-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000226	supercontig	sc0000226:331281..341438 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0163389	0	0	2.46784	0.825743	1.71373	0.486355	1.33853	1.2916	0.799701	0.22687	1.7752	0	0.063639	0.0516336	2.94682e-09	0.334478	0.878465	0.325537	0.215638	0.570504	0	0.0403656	1.82839	2.93269e-09	7.22601e-09	0	0	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00016104 vs. Swiss-Prot (Human)

BLAST of TCONS_00016104 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00016104 (transcript) - C. hemisphaerica