|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015437 ID=TCONS_00015437|Name=TCONS_00015437|organism=Clytia hemisphaerica|type=transcript|length=885bp
CAGCCAGGCAATCTTGAAGAGATGATGTACCCTAAGTAACAATGAGTGAC
ACTAAATCAAAAAAGTACATTCAAGTTGAAGATGTATTTCCAGAGGAAAC
AGCTCTCCTAGTGCGGGAGATTGGACAAAATGCAGTTTGGTCCTTGTCAT
CTTGCAAAGTTGGATCAGGCGTCAACCAGCTTCGTGATAATGACTTGACG
ACATACTGGCAATCAGATGGGCCGCAGCCACACCTCATCAATATACAATT
TCCAAAGAGAACAATTATCAGTTACATAAGTATTTATACTGAGTATAAAC
AGGATGAAAGTTACACACCAAACAAAATCTCCATCCGGGTTGGCAACGAT
CCCCATGATCTTCAACAGTTCGAGTTATTGGAACTGGATGAGCCAAGTGG
CTGGATCAATACAGAACTGTGTAAAGacaatcaaaatatcaaaactttcA
TGATACAAATTGCTGTGTTAGGTAACCACCAAAATGGGCGTGATACACAC
TTACggcaaatcaaaatatttggtCCAAAACACAATACTGTTGACGTGAA
GGTCCCTTCCATAGAACAATTTGTTTCTGTTGACGTGAAGGTTCCTTCCA
TAGAACAATTTGTTTCTGTTGACATGGCACAGTTCTCATGTATTAGGTGA
CGTAAATGTTTACCGAAATCAATTATTGTACTGAATGTTGTTTTTATCAT
TAGATTAACATCGtcttctttttttgtaaaatattgtaaaGTAACAACCT
CCGTATTATTCTTTCTCGACCTTTTCACTTCAATCAGttctcttgggtac
ctaatttATTGAGTGTGCTTACTCTTAGATAGGTGCCTAATTTATTGGGT
GCATTTACCAAGTTAAAATTCCAATCATAATTGAG Run BLAST on NCBI protein sequence of TCONS_00015437-protein >TCONS_00015437-protein ID=TCONS_00015437-protein|Name=TCONS_00015437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
MSDTKSKKYIQVEDVFPEETALLVREIGQNAVWSLSSCKVGSGVNQLRDN
DLTTYWQSDGPQPHLINIQFPKRTIISYISIYTEYKQDESYTPNKISIRV
GNDPHDLQQFELLELDEPSGWINTELCKDNQNIKTFMIQIAVLGNHQNGR
DTHLRQIKIFGPKHNTVDVKVPSIEQFVSVDVKVPSIEQFVSVDMAQFSC
IR Run BLAST on NCBI transcript from alignment at sc0000211:297326..305936+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015437 ID=TCONS_00015437|Name=TCONS_00015437|organism=Clytia hemisphaerica|type=transcript|length=8611bp|location=Sequence derived from alignment at sc0000211:297326..305936+ (Clytia hemisphaerica)
CAGCCAGGCAATCTTGAAGGTATAATCATTATAAtatgatattttgatat
ttcagtGCTCGAAATAACGTTGACACATTTTAATGCGTAGTTATTATCAA
TCTGGATAAAGTGTGCATTTagttagtttttcattttttacagtacccag
acgatctcaatcgaacggaatcgacgatcgaaccagtcgaaccaaatcga
acgcaatcgaccgattgaaattcgattgtcgaacgcaatcgaatctcaga
cgaatattaccgcaattttcagattcgattgatattcgattgcgttcgat
tgatgttcgattgagttcaattgcgttcgatcgtcgattcattgaccccc
ggactgttcatcgcataatttctacgggaaatcgaaagtaatttcatttg
gcttgtgatgtttgagagcttggatgttgggaagctgcaagaataaagct
agacgatctcaatcgaacggaatcgacgatcgacgaaccagtcgaacaac
aatcgaaccaatcgaatattatcCAAAaatttgacgttcgattgagattc
gattgcgttcgacaatcgaatttcaatcggtcgattgcgttcgatttggt
tcgattggttcgatcgtcgattccgttcgattgagatcgtctggcagTAC
ATAGTTTTATATTGACATTTTGTCTGTTTGATTGAGAACCCTGTTCCACA
CTTTGTACACTTTGTGTCAAAATTTAGATTGTAAAGAATTCTTTAGATAT
ATTTTTTAGGAtcttttattgacaaaattgtACTTATTCGtccttttgaa
caaaaatattatctttgatatgttttttttcaaacaacctTTCCTTTTTG
TACAGACCCGGGCCTTTTCTATGCTGGATGGCActaggccaggcccaatt
gattgtttggtttgtgtcctagaagctttgaaaaatgggtcAGTCGGTCG
gaaccttttttttattttcaaacaaatCGTGCAATCCTctcagttgggtg
tttaagataaaaactgcaattattgctctttttggcAAAGAAATGCCGCG
TCAGCAAAATATATTGTCCttataagggcaaagatgtcaaaggtgtttga
aaattgtgaaattgcATTGAGGAAaaggtttttcagatttttaaaagtga
ttttttcaattttttgttgctCAATATAATAGACAGGCAGCTGTTGtgat
gacatcaaaaaaagtgaataagtGAAAATTTGAGAGACAAATGTTGAgta
cttattttgaaatctttatagtttagtttagagagtcagaaaaatttact
tGGAGTGTTTAATAAAAATCTTTACTGGACGTGTCTGAGAATAATTTatt
gattgatgacgtcacaagcagttacatcaatatcaatatgccaaaaacat
tttgttcaaccaccttcacttcaagaaaggccaccatagaatgaacttcc
ttttataggatgaaccatattcatgtggctttcagccttgcactctatca
cagagcctatttgagatattttactaactagcccagagaaaattttttaa
cctttattatttgaatgcatgcctttgtaatactcaaatataaaaaaatt
aaaaatttttaacttggtcattagtcaaaaaagtcattaaaattgattag
cctctgcgatggagtgcaaggctgaaagccacatgaacatggttcatcct
ataaaaggaagttcattctatggtggcctatcttgaagtgaaggttgttg
aacaaaatgtttttggcattttgatgTATATAACTGacaagcaaaagtga
aaaattgatgttgcaaaatttcaaagttttatataccatttgaagcgttt
tttgatgtagatttcaaatcacatcaatctcaataagtaaaaatttgaat
atgaaaagttattgaggtccgTAGCTCTTCTATGAcgacgtcatttttga
aaaaatgtctcATTTACAatctcaattttctcgagttaggctGAGAAATC
GAATACTGTATACCCGTTTAattgtcttctatatagtttttaatgatttt
ttgaaatttcgacatggaaaaaaagtcagttttttggaaataactttcga
actactttttcaaatttaatgtatgatagctcaaaattNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtatcctctatacaataaaaaaagaatga
acaaaaaatttaaattctgaagctcacaatatctcgacaaagttgtatac
ttttttttggtgcacccggtatatatcattattatatgctgaaatctaat
tttcacttttggtggggacgtcatcatttgacaaattacTACCGGACATG
TCCGTTGAATAAATTTTCTCACCAATCGGCATCTGGTCATTTTGTAGTCA
TATAAAAACCTTTATTACATGATTGAactataaaaacaaacaaaagaaag
cCTGAGAGGATGTTGAGAATTTAAGGTATGTGTAAAGTTAGGTAATCTGA
CGAAAATTGTGGTTTTCAAACTGAAAATCTTAGATTGAGATTAGTAACAA
AATTGAGATTGAACCTTATAATAATAACttatgaaattttaaatatcttg
aaatacaaacaataaaatgttaaattaagattataaataataaataaata
taatgaATAAATGTAGTAAAAACCTTTTACAGCACAATATTGAATAGAGA
CATTACTAGAAAATagttaatttttcctaaaatgTTCAATATATAAGTTT
AGTTCTGAAGAGATCCTCTTTTGCAATCTTTCTCAAATCAGTTGGTCAAT
TATTCCACCATTTTGTGGCTGTTGGGACAAACGAGTTTGTATATGCAAGA
attctgtcaatttttttgctggagTTTAGTACCGTCTCTAGAATGATTTG
GTAGCATACTGAGAGGAATAGCAATTTTCTTGTGTAGAATTTTATGTAGC
ATGACAAGGCTTGAGATTTTATGCTACAGTGCAATTGAAATCCATTCAAG
GTTTTCAATCATTGTTGAAGGACTTGAATTCCAAGACCAGTTGTTGTTGA
TGAAACAGGCTGCTTTACGCTGTACCATTTCCAGATCAGAGCATAGACCT
GCATGGAGGCATACATAACAATTAGTAGAACATAAACTTTGAATGCCTTG
ATTTGTATGTTCTTTCAACATCCCCTCAGCATTCTTTTACGATGTGTTTA
CCCCATTCTGAGTCTTTAATGGATTGTAACGCCTCGGTATTTTGCTGTTT
AACACTTTCGAGTGTCTCTATGTGGATTGTGTATGAGGTGACAACTggtt
tgattttgtttgttattgcgagctgtttacatttttgaggGTGAAATTCC
ATGTCCCAGTTGTGCTCCCAAATTTGCAGTTGATTCAAGTCTTCTTGTAA
GATCTGCATATCTAAAATTGATTTCATAATTCTGTCAGGGGGGGTTGGTA
CTAAGCTGTGGGGGCCAGTGCCGTGTGGTGGTCTgataaggtaagtaaaa
aacaacttagtacATGGTACTAAGTTGTTGTtctaattgaaaaaaacatt
tttgcaactttgTATCAAGGGTCTAAATGGTGGTCTCAATACCCAATATG
AGGCATCAAGTTAATATCTGTTACTCAAAATCctgcaaaatcacaaaaaa
tgttctttcacTTTCTTCTCTTTCTCTTGTTTTAAGTTCTGATACCAGAT
TCTTCATGTAGGTAATGTCTTTATCAGGTGCCAGGTGCCAGGTGGACGAT
ATATGCTACAAACAATTACCAGCTTCTTAAAGGTTTCTATTTTAATAGCA
ATACATTCTGTTTGGGAAGGATTAAAAACAGTATCTGTGATGAGAGATTT
CTTTGCAAAAATAGCTACACCTCCCCAGCCATCTTTGCAATCATTACAAT
ATGAAGCATATCCTGGTAGTTCAAGTTCAAGATTTTTAATCGAAGGATCT
AGGAAGGTTTCTGAAGCAATAACAATGTCTGAGTCTTCGTCTAAAAGCGT
GTTACTGAAGAGTTCTTTTTTACCCCATAAGCCTTGGAGATTCACCACCA
TCAGAGGCAGCATTCTTGCTTTAGTCTTAGGAGTATCAGTGTCTGATTTT
CCACTAGAAGCAGAAGATAGTATACTGTCTGTTAACGGATTGTTGGAACG
TATGGTTGCACAATTAAAGCCATTGCCATTCAAAATCACAGTCTTCTGCG
TGTAGTGTAAATATGTTATCTGACATGTAGACACATTTCTTATGGAATCA
CTTGTCACATGTATCACAGGCAATAGCATCCTGAGTCACTGCTTTCCCAC
ATTCTCGGCATGGGTATTTAATTTTTCGCATCACGTTaagaagaaaattg
ataaatGGATAACAATGGAAGAAAAATGTATAAAGACTGATACCTGCTCA
GCTGCACATGGGAACCCAGGTTCTGACATTCTCATATAATGCTTTCAATT
TAGGATAATCCGGGAATGATCATTTCTTTTCTCCCGTGAATACCCCTTTT
GCAGGTACTGCGTATGACATTTTGACTGGCAAAGGTATCAATATCAGTAA
CACCAACGTTGTGCTTAATGAGGGTATTATCCCCAACGCCCAATTTTTCG
ATCTGACAATCGATCTGCAAGCCCACCACCTAATTGTTTATAGCAGTGGG
CTTGTCAAGAAGGAACCGCTCCTTCACTCGTTCAACGAAGAAGTGATCCA
CCTTCTTCTCCTTCTTGCTCTTTATGTAAATGCATTGACCCATGAGCCAA
TGATGCTTTCCCTGGTGTTTGACGGTTGCTGACAACAAACAGAGGCTGCT
TAAAAAGCTGCTTTATAAATGAAAGGAGAAAATTTCCGTGGCTGATCCAT
GGCCTATAGAAAAAAGAGGCAGGACCAGTTAAAAGTGAAATCTTGGCTGT
TAAAAAGCCGGTATTTTACCGCTTTTTAGACAATTGGTCTTGATTGGCCT
TTTCAAGTGCTAAAAATTGCTTGGTGAGTCACCTTTCAACATATAATATT
TACACAAATCAACTCTGATGTGCTATTTGAAAGAATATATGTATTTACAT
TATATATTTGCTTCCCCCTCCCTCATATAAGTATAAAGAATATCTTCTCT
TCTCCCATTTTGTATAGTTTGTATTGTTCAGAGGTGATTTCCCAAATTAT
TTCTATTCATTcagaaaatattcttttgtatttagaGAAAATTCAGTTCC
TGatcctgtatttttgaaggatagggtagttaaatactaaaatgggtgct
atctatgtgttaaatgttgaaaaaatgttactacctgggtagttaaaact
ggtaaacttagcaaattttagctatttttgtaattcttttaattttttgg
atgacttttctgaaaaaatctgaaaatttttaaaatttgaaaaagttttc
tgttggaaagttgtttgctgcaaacaaaaaattctcgaaattttttgtca
atataaaaaagacttgaattataagggcaaaacattaatttttgcactta
gtgaaaaatgtgtcacaaaaataatcattttttagcttttttcgtaaaat
cagtccgaaaagcaaccaaaaaataggcagtctccatgacaaattgtccc
aaaaactcttactaccagggtagtaaaacaCCTCTTCCAAGAATCcaggt
ggtggtatgtaaaaattggtaaaaatccttttactactcatatatgtctg
agattttactaccaaCCTCCCCCCCTGGTAGAAACTGTCTTAGAAagaaa
aaaggttaaatttaatTAGTTagtaggaaaattttttttttggaattctt
ACAAGCACCTTTTCATTGTCTCGTTAGCTTAAACAAAGTGCTCAAAAAAG
CGCCGATGACACCTTTCTATGTGCACATTTTTATAATATGTCATCTTTTT
TATGTCAATCTATATAAGAATGTCTCAATTCAAATAGGAATTTGTGAATG
TCTGATACTTGATATTGAAAATATGTACTCATACTTTGATTAAGTACATA
TCCCTGTCTCTTGTAAGAACCAAAATCATTCTTGACAATGGTAGGAAAGC
TCTatattcaaaagttatagctatatttaaaataatattttttgcctCAA
AGGAACATTTTGTCAATAGAATAATAATTCTACAGAATTGTTTGCAAGAT
AAATTCTGAAACATGCACCAACGTGGTCTTAAACTGAATACACTCaatta
agtttttttaacttttaatttgatgttcttataaaatcaaaatttacata
AGTCTTTAAGATGAGTATTGAGTGTTTATGCATTTACAGTAAAAGTAAGT
AGTACCGGGTGTGACACTattaagttaccctctttgatttaatattgtag
gcagtagagaagagatttttcaaagattatcTCAGAATCATTCAGGGGAA
AGCCTAAcataaaatttggtgtattactttttaattttacttcattggtt
caaaagttatgttcaaaaacctaaaatgccaattttaaaaattgtcaaaa
aacaaaacaatctctgaaaaatctttcTGCCACTGCCTGCAATATCAtta
tcaaagagggtaacttatttgtggcacacccggtatattAAGTATTAAGT
ATGTTTTGAACTTACCCATTTTTTAACACGAAAAAGTTTTAGATTTTGTC
AGTTTAGACATGCTGGatattttaaagttaatttcaAGACATTGTGCAGC
ACTGTGAGGTATTTTATAGCATAGCAACCAGTAGGCAGTAGGCATTTTTG
ACCTGCCCTGTATGTGAATATTTTGAATTGTGTGATTTATTAGAGAGTAT
GAAACAGGCACAAATATGcaaaaaacatcgatttttatttatttttattt
tttaatctctggaaatatttttgaacttctttttctaaaattgttGTCCT
ACCTTTTGAGCTGCTGAGTTTCAAGTCTTTTTCTTGGCTATATCAAAAGA
TATGATCTGACCTTACTGACATGAAAACAGCTTTTCCAGTACAATCAATG
TTACCTGGACCCATTAGGACCCTCTACTCCAGACCCTCTGAAATCAAAAA
GCCCCTTAAAACGCTATTTTTACTTGTCTTCATTCCGTAAACTAGAGAAG
AGATGTTGAGGAACAAAAAAGTTGTATAGAAAACTACCAACCCTCTAGGC
TGCTCTAAGTGGTGCTACCCGTACTCAGGATCTGGtatatttgaacattt
tttgttAGTAGAATATTGGTTTTAATCTGACACAGAGATGATGTACCCTA
AGTAACAATGAGTGACACTAAATCAAAAAAGTACATTCAAGTTGAAGATG
TATTTCCAGAGGAAACAGCTCTCCTAGTGCGGGAGATTGGACAAAATGCA
GTTTGGTCCTTGTCATCTTGCAAAGTTGGATCAGGCGTCAACCAGCTTCG
TGATAATGACTTGACGACATACTGGCAATCAGATGGGCCGCAGCCACACC
TCATCAATATACAATTTCCAAAGAGAACAATTATCAGTTACATAAGTATT
TATACTGAGTATAAACAGGATGAAAGTTACACACCAAACAAAATCTCCAT
CCGGGTTGGCAACGATCCCCATGATCTTCAACAGTTCGAGTTATTGGAAC
TGGATGAGCCAAGTGGCTGGATCAATACAGAACTGTGTAAAGacaatcaa
aatatcaaaactttcATGATACAAATTGCTGTGTTAGGTAACCACCAAAA
TGGGCGTGATACACACTTACggcaaatcaaaatatttggtCCAAAACACA
ATACTGTTGACGTGAAGGTCCCTTCCATAGAACAATTTGTTTCTGTTGAC
ATGGCACAGTTCTCATGTATTAGGTGACGTATATGTTTACCGAAATCAAT
TATTGTACTGAGTGTTGTTTTTATCATTAGATTAACATCNCAAAATGCAG
TTTGGTCCTTGTCATCTTGCAAAGTTGGATCAGGCGTCAACCAGCTTCGT
GATAATGACTTGACGACATACTGGCAATCAGATGGGCCGCAGCCACACCT
CATCAATATACAATTCCCGAAGAGAACAATTATCAGTTACATAAGTATTT
ATACTGAGTATAAACAGGATGAAAGTTACACACCAAACAAAATCTCCATC
CGGGTTGGCAACGATCCCCATGATCTTCAACAGTTTGAGTTATTGGAACT
GGATGAGCCAAGTGGCTGGATCAATACAGAACTGTGTAAAGacaatcaaa
atatcaaaactttcATGATACAAATTGCTGTGTTAGGTAATCACCAAAAT
GGACGCGATACACACTTACggcaaatcaaaatatttggtCCAAAACACAA
TACTGTTGACGTGAAGGTTCCTTCCATAGAACAATTTGTTTCTGTTGACA
TGGCACAGTTCTCATGTATTAGGTGACGTAAATGTTTACCGAAATCAATT
ATTGTACTGAATGTTGTTTTTATCATTAGATTAACATCGtcttctttttt
tgtaaaatattgtaaaGTAACAACCTCCGTATTATTCTTTCTCGACCTTT
TCACTTCAATCAGttctcttgggtacctaatttATTGAGTGTGCTTACTC
TTAGATAGGTGCCTAATTTATTGGGTGCATTTACCAAGTTAAAATTCCAA
TCATAATTGAG Coding sequence (CDS) from alignment at sc0000211:297326..305936+ >TCONS_00015437 ID=TCONS_00015437|Name=TCONS_00015437|organism=Clytia hemisphaerica|type=CDS|length=1218bp|location=Sequence derived from alignment at sc0000211:297326..305936+ (Clytia hemisphaerica)
ATGAGTGACACTAAATCAAAAAAGTACATTCAAGTTGAAGATGTATTTCC
AGAGGAAACAGCTCTCCTAGTGCGGGAGATTGGACAAAATGCAGTTTGGT
CCTTGTCATCTTGCAAAGTTGGATCAGGCGTCAACCAGCTTCGTGATAAT
GACTTGACGACATACTGGCAATCAGATGGGCCGCAGCCACACCTCATCAA
TATACAATTTCCAAAGAGAACAATTATCAGTTACATAAGTATTTATACTG
AGTATAAACAGGATGAAAGTTACACACCAAACAAAATCTCCATCCGGGTT
GGCAACGATCCCCATGATCTTCAACAGTTCGAGTTATTGGAACTGGATGA
GCCAAGTGGCTGGATCAATACAGAACTGTGTAAAGacaatcaaaatatca
aaactttcATGATACAAATTGCTGTGTTAGGTAACCACCAAAATGGGCGT
GATACACACTTACggcaaatcaaaatatttggtCCAAAACACAATACTGT
TGACGTGAAGGTCCCTTCCATAGAACAATTTGTTTCTGTTGACGTGAAGG
TTCCTTCCATAGAACAATTTGTTTCTGTTGACATGGCACAGTTCTCATGT
ATTAGGTGAATGAGTGACACTAAATCAAAAAAGTACATTCAAGTTGAAGA
TGTATTTCCAGAGGAAACAGCTCTCCTAGTGCGGGAGATTGGACAAAATG
CAGTTTGGTCCTTGTCATCTTGCAAAGTTGGATCAGGCGTCAACCAGCTT
CGTGATAATGACTTGACGACATACTGGCAATCAGATGGGCCGCAGCCACA
CCTCATCAATATACAATTTCCAAAGAGAACAATTATCAGTTACATAAGTA
TTTATACTGAGTATAAACAGGATGAAAGTTACACACCAAACAAAATCTCC
ATCCGGGTTGGCAACGATCCCCATGATCTTCAACAGTTCGAGTTATTGGA
ACTGGATGAGCCAAGTGGCTGGATCAATACAGAACTGTGTAAAGacaatc
aaaatatcaaaactttcATGATACAAATTGCTGTGTTAGGTAACCACCAA
AATGGGCGTGATACACACTTACggcaaatcaaaatatttggtCCAAAACA
CAATACTGTTGACGTGAAGGTCCCTTCCATAGAACAATTTGTTTCTGTTG
ACGTGAAGGTTCCTTCCATAGAACAATTTGTTTCTGTTGACATGGCACAG
TTCTCATGTATTAGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015437-exon-sc0000211-1491911889:297326..297344 | TCONS_00015437-exon-sc0000211-1491911889:297326..297344 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1510915933:297326..297344 | TCONS_00015437-exon-sc0000211-1510915933:297326..297344 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1575043694:297326..297344 | TCONS_00015437-exon-sc0000211-1575043694:297326..297344 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1491911889:304561..305125 | TCONS_00015437-exon-sc0000211-1491911889:304561..305125 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1510915933:304561..305125 | TCONS_00015437-exon-sc0000211-1510915933:304561..305125 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1575043694:304561..305125 | TCONS_00015437-exon-sc0000211-1575043694:304561..305125 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1491911889:305636..305936 | TCONS_00015437-exon-sc0000211-1491911889:305636..305936 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1510915933:305636..305936 | TCONS_00015437-exon-sc0000211-1510915933:305636..305936 | Clytia hemisphaerica | exon |
| TCONS_00015437-exon-sc0000211-1575043694:305636..305936 | TCONS_00015437-exon-sc0000211-1575043694:305636..305936 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000211 | supercontig | sc0000211:297326..305936 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0031145 | anaphase-promoting complex-dependent catabolic process |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005680 | anaphase-promoting complex |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0031145 |
anaphase-promoting complex-dependent catabolic process |
| cellular_component |
GO:0005680 |
anaphase-promoting complex |
Blast
BLAST of TCONS_00015437 vs. Swiss-Prot (Human)
Match: APC10 (Anaphase-promoting complex subunit 10 OS=Homo sapiens GN=ANAPC10 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.947e-52 Identity = 94/150 (62.67%), Postives = 116/150 (77.33%), Query Frame = 3
Query: 111 VREIGQNAVWSLSSCKVGSGVNQLRDNDLTTYWQSDGPQPHLINIQFPKRXXXXXXXXXXEYKQDESYTPNKISIRVGNDPHXXXXXXXXXXXXPSGWINTELCKDNQN-IKTFMIQIAVLGNHQNGRDTHLRQIKIFGPKHNTVDVKVP 557
VREIG AVWSLSSCK G GV+QLRD++L TYWQSDG QPHL+NIQF ++T + + IY +YK DESYTP+KIS+RVGN+ H+LQ+ LEL EPSGWI+ L +++ +TFMIQIAVL NHQNGRDTH+RQIKI+ P + K P
Sbjct: 22 VREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFP 171
The following BLAST results are available for this feature:
|
