TCONS_00015437-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015437-protein
Unique NameTCONS_00015437-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015437-protein ID=TCONS_00015437-protein|Name=TCONS_00015437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
MSDTKSKKYIQVEDVFPEETALLVREIGQNAVWSLSSCKVGSGVNQLRDN
DLTTYWQSDGPQPHLINIQFPKRTIISYISIYTEYKQDESYTPNKISIRV
GNDPHDLQQFELLELDEPSGWINTELCKDNQNIKTFMIQIAVLGNHQNGR
DTHLRQIKIFGPKHNTVDVKVPSIEQFVSVDVKVPSIEQFVSVDMAQFSC
IR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008620XLOC_008620Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015437TCONS_00015437Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004939APC_su10/DOC_dom
IPR008979Galactose-bd-like
IPR016901APC10/Doc1
Vocabulary: Biological Process
TermDefinition
GO:0031145anaphase-promoting complex-dependent catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005680anaphase-promoting complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031145 anaphase-promoting complex-dependent catabolic process
cellular_component GO:0005680 anaphase-promoting complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004939APC10/DOC domainSMARTSM01337APC10_2coord: 24..188
e-value: 3.8E-84
score: 295.5
IPR004939APC10/DOC domainPFAMPF03256ANAPC10coord: 23..174
e-value: 1.7E-64
score: 216.8
IPR004939APC10/DOC domainPROSITEPS51284DOCcoord: 3..186
score: 31.859
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 2..163
e-value: 1.2E-53
score: 181.3
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 14..163
IPR016901Anaphase-promoting complex subunit APC10/Doc1PIRSFPIRSF028841APC10coord: 1..202
e-value: 4.1E-72
score: 239.5
NoneNo IPR availableCDDcd08366APC10coord: 25..161
e-value: 1.22936E-84
score: 248.242

Blast
[Close]
BLAST of TCONS_00015437-protein vs. Swiss-Prot (Human)
Match: APC10 (Anaphase-promoting complex subunit 10 OS=Homo sapiens GN=ANAPC10 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.458e-65
Identity = 95/155 (61.29%), Postives = 117/155 (75.48%), Query Frame = 0 
Query:   19 ETALLVREIGQNAVWSLSSCKVGSGVNQLRDNDLTTYWQSDGPQPHLINIQFPKRTIISYISIYTEYKQDESYTPNKISIRVGNDPHDLQQFELLELDEPSGWINTELCKDNQN-IKTFMIQIAVLGNHQNGRDTHLRQIKIFGPKHNTVDVKVP 172
            E    VREIG  AVWSLSSCK G GV+QLRD++L TYWQSDG QPHL+NIQF ++T +  + IY +YK DESYTP+KIS+RVGN+ H+LQ+   LEL EPSGWI+  L  +++   +TFMIQIAVL NHQNGRDTH+RQIKI+ P   +   K P
Sbjct:   17 ERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFP 171
The following BLAST results are available for this feature:
BLAST of TCONS_00015437-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APC106.458e-6561.29Anaphase-promoting complex subunit 10 OS=Homo sapi... [more]
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