TCONS_00015421 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015421
Unique NameTCONS_00015421
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3485

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015421 ID=TCONS_00015421|Name=TCONS_00015421|organism=Clytia hemisphaerica|type=transcript|length=3485bp
CTTTTCTCTGTCAATTTTTTCCCCACCATTTTCGATGTTGTTGTCTGGGT
CTTGCAGTTCACTCAATCGCTTTAATTTGTCTTGAATACCCATTGTATAA
AGGttctatttcaaaaaaagaaattggattttaggggtcactcacaaatc
gattttaagttcAAATAACGTCATATGACGTTTGTGGGTGGGTGGGTCAA
GGTAGGATGACGCTTTGAATGGGTTATAAAAAACATCGATTTTGAGATAG
AGCTTTCATCTAATATATTATCTCTTTTCTATTTTGTATAATGAAAGAAT
AAAAAATATAAGTGAAATGATATAAAGTACAGAACAAACAGTCAAACCAT
AACCAGACAAACCAGACCCCTCAAAAGTTAAGTTTGTATAACGACGGCTC
GACTTTGATCGCTGCATTTTGTATTTTGTTGACTGTTGGACTTAGACGAA
GAGCACCTCGAAAATTATCAAATAAAAGGAAAGCTGCGGAAAAGAATACG
GAAGTCTCGGAAAAAAGAATACGGAACTATTTGTCCGCCGAAACATTTTC
ATTTTTTGCACGCGTCACACTCCAGCTGGAAGCAACGAGTACTTTGGGCA
AGCATCGAGCTTTATCAGTCTGGGCAAGTCGGGTCTAGAAACCAGTGGTC
AAAGCGGCGTTGGTTTGGTTGGTTGGTTGCAACGCTCGAGTCGAAAATAT
GGTGATGGCGTTGAGCATGAGTTGGTGTTGGTTTTGACGTTTTGGCTGAA
GAAGTACCAGATTTTTTTGAGTGACGTTAtgtggggtgggtgggtgtgcT
AGCTATCAAAACGTCATATGACGTTATTTgaacttaaaatcgatttgtga
gtgaccccttaatGCCTCCAAAACTGCAAAATTAACTTTCGATTTGAGGT
CACGCTGCTTTGGCTACCATTTTAACTATTCTATGTTCTGCAAAGTACAC
TTTTTCGTAGCAACGTTCGAAGCTTGCCGgtttcaagatggcggttttgt
tttgatttttcatcagCTGATTGTTCACTGAGTAACACATTGGTGTAGGT
GTATGTGCTCTAAGTCAGAGTAAAAAACGTTGGCAAAAAGAGTGGAGATG
ATCCAGAATTGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGACGT
TTGGCAGCTAAATGataattgtaaaaataaaataggTGGTAAAACTTTGC
AGCAGCAAACAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTTGTT
GGATCTTGTAATGATGGACTGAATAACTTATCTaagtttgaagaaaatta
tAAAACTTCTCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACTTTT
CGCCACCTTCGTTATCGAGGAGACAGTTTACAATTTCACTTGATAACGAA
CTTCATAAACGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAACTT
GACATGCTCAACTTCTGTATTTCATAACTGTTCATCATTTACAACAGAAA
ATATCTTGCCAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGGGAG
CCAAAAAACAGAACagtaaaagataaaaaagtaaatggtaaaaagaaaaa
gaaaatccgTATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAAGGA
AAAATAACGACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAATCA
TCCCGAATCACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAACTG
CAACGAGAGGATATCgatcaaatcttttttcaacAAGAAAAAGAACACTG
TTCATGACCCTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCTCCA
TCAAAGAAACGGAATGATTATCCAAATCATAACAATAATAACCATGATTA
CAGAAAAAGTTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGGTTT
ATTATTCAGAAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATGGTG
CCACCAAGTACACCAGccGTTCACGAGAATGAAAATGTAGAATCAATGGC
TGATTTAAAGaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAGGTT
CGAAACGTAAAGAAAAAGAAGCAGAACGCGAtcggaaagaaaaagaaaga
ctGAAACAAGCAGAAGAAGAAAACAGGAAAAACTTGATCGCTTTCCAACG
AAGACAGATATACTACTTGAACAAGATCATGACCAAACTGGAAAGTGata
attttgagaaattcaaactgaCCCAACTCGGTGCACCTGTTTGACTTAAA
GATTAGGATCCATTTataattaataaaatttttttaaagacacaTTAATC
TAGGTATCCTAggttttattatttattttaattaAAGTAATTTATCAACT
AGAATAGAAAATGATAAGGTGAGAAAAAAGATCACCACTTCCGTAGCATT
TTCAGATCTTGACTCTATATCACAATAATTTGACTATATACGGtatattt
tgttataattttttatctaaaacaaaatttacaagTACAATATAAgacaa
aataaattaaaaatgaaatttgtaaaaataaatttacaacatgaaaagtt
tttaaaaaagggaGCAAGCGGATGAATATTTGAAAACAGTTCAATTGTGT
CTTTTTTGCgtttaccatttttcaaaaaccccGAAGGATTTCACACATGG
CTGTATGAACCTTAAAAGGTCTAAAATAAcacagaaaacaaaacaaaaat
gactATAGATTATATCAAacaattaataaataaataatttggCCAGATAA
TTTCTCAGAAAAACCTATCTGTTCTCAACAGTTTTGGTGTCGGGTAGTCG
CCGGTATTCATCATCACAAACAATTATTTAATTAACCTGGGTACTAAAAT
GTGGACTGTCAAGGAGCGCTTCTACATCCTCAAATTATTTGCATACTTTG
AGATCGATTCTAACAACAAAGCATTTGCCCTACTATCCAATTTTCTCCAT
TTCAGGCCATTTTTCGACACGGCGTTTATCAGCAATCGGTAAAGTACCAT
CCATTAACCGATCTAGCCATGCAGGGAGCTCTCTTTTCGATTGGATCGCC
TGGCGAGCAGCCAGTTCATCCTCGCTCTCATCTAAACCGAGAAATTCAGG
AGACATGTTGCTAGTGTTATCTAATTGATTTTTGGGTCGATAAATATAAA
AGTATTTTCGTGAACCGTTGAAAGCGATGACCGATCCAGGAGGGAATTCA
CCGAACTTGTTACTATTAGTCATTTCGTTGCACCACATCAAATGTTCAGC
TAACGATAACCAGGCGAAACGTAACTTTGGATTCCTGAAAAAATGAATTA
GAGGATGTAGTTTTTTGATATCACTCAAAATGGTAAAATGAGGGATttga
aaatttatgtttttttgtgttCCTTGAGAGACCAACCTTCACATACATTG
TTTTTCTTAGGCCTTTGAATAGTCTATGTGGTTac
Run BLAST on NCBI

protein sequence of TCONS_00015421-protein

>TCONS_00015421-protein ID=TCONS_00015421-protein|Name=TCONS_00015421-protein|organism=Clytia hemisphaerica|type=polypeptide|length=398bp
MIQNCRPNKYKSSFSYDVWQLNDNCKNKIGGKTLQQQTDASEKIYHPFLV
VGSCNDGLNNLSKFEENYKTSLSTRSIDRLSRNFSPPSLSRRQFTISLDN
ELHKRRSSGSGRQHPSNLTCSTSVFHNCSSFTTENILPGVECKTITSSKR
EPKNRTVKDKKVNGKKKKKIRIKPKRDISPTSQRKNNDTLDKETKKSSPK
SSRITFSFTKRTTSNNNCNERISIKSFFNKKKNTVHDPSIKFSDPSPCSS
PSKKRNDYPNHNNNNHDYRKSLPTSPQKSSSRRVYYSEKQSLSDANGIPM
VPPSTPAVHENENVESMADLKSQRNIVQKLLKIGSKRKEKEAERDRKEKE
RLKQAEEENRKNLIAFQRRQIYYLNKIMTKLESDNFEKFKLTQLGAPV
Run BLAST on NCBI

transcript from alignment at sc0000211:155483..160285+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015421 ID=TCONS_00015421|Name=TCONS_00015421|organism=Clytia hemisphaerica|type=transcript|length=4803bp|location=Sequence derived from alignment at sc0000211:155483..160285+ (Clytia hemisphaerica)
CTTTTCTCTGTCAATTTTTTCCCCACCATTTTCGATGTTGTTGTCTGGGT CTTGCAGTTCACTCAATCGCTTTAATTTGTCTTGAATACCCATTGTATAA AGGttctatttcaaaaaaagaaattggattttaggggtcactcacaaatc gattttaagttcAAATAACGTCATATGACGTTTGTGGGTGGGTGGGTCAA GGTAGGATGACGCTTTGAATGGGTTATAAAAAACATCGATTTTGAGATAG AGCTTTCATCTAATATATTATCTCTTTTCTATTTTGTATAATGAAAGAAT AAAAAATATAAGTGAAATGATATAAAGTACAGAACAAACAGTCAAACCAT AACCAGACAAACCAGACCCCTCAAAAGTTAAGTTTGTATAACGACGGCTC GACTTTGATCGCTGCATTTTGTATTTTGTTGACTGTTGGACTTAGACGAA GAGCACCTCGAAAATTATCAAATAAAAGGAAAGCTGCGGAAAAGAATACG GAAGTCTCGGAAAAAAGAATACGGAACTATTTGTCCGCCGAAACATTTTC ATTTTTTGCACGCGTCACACTCCAGCTGGAAGCAACGAGTACTTTGGGCA AGCATCGAGCTTTATCAGTCTGGGCAAGTCGGGTCTAGAAACCAGTGGTC AAAGCGGCGTTGGTTTGGTTGGTTGGTTGCAACGCTCGAGTCGAAAATAT GGTGATGGCGTTGAGCATGAGTTGGTGTTGGTTTTGACGTTTTGGCTGAA GAAGTACCAGATTTTTTTGAGTGACGTTAtgtggggtgggtgggtgtgcT AGCTATCAAAACGTCATATGACGTTATTTgaacttaaaatcgatttgtga gtgaccccttaatGCCTCCAAAACTGCAAAATTAACTTTCGATTTGAGGT CACGCTGCTTTGGCTACCATTTTAACTATTCTATGTTCTGCAAAGTACAC TTTTTCGTAGCAACGTTCGAAGCTTGCCGgtttcaagatggcggttttgt tttgatttttcatcagCTGATTGTTCACTGAGTAACACATTGGTGTAGGT GTATGTGCTCTAAGTCAGAGTAAAAAACGTTGGCAAAAAGAGTGGAGATG ATCCAGAATTGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGACGT TTGGCAGCTAAATGataattgtaaaaataaaataggTGGTAAAACTTTGC AGCAGCAAACAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTTGTT GGATCTTGTAATGATGGACTGAATAACTTATCTaagtttgaagaaaatta tAAAACTTCTCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACTTTT CGCCACCTTCGTTATCGAGGAGACAGTTTACAATTTCACTTGATAACGAA CTTCATAAACGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAACTT GACATGCTCAACTTCTGTATTTCATAACTGTTCATCATTTACAACAGAAA ATATCTTGCCAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGGGAG CCAAAAAACAGAACagtaaaagataaaaaagtaaatggtaaaaagaaaaa gaaaatccgTATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAAGGA AAAATAACGACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAATCA TCCCGAATCACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAACTG CAACGAGAGGATATCgatcaaatcttttttcaacAAGAAAAAGAACACTG TTCATGACCCTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCTCCA TCAAAGAAACGGAATGATTATCCAAATCATAACAATAATAACCATGATTA CAGAAAAAGTTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGGTTT ATTATTCAGAAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATGGTG CCACCAAGTACACCAGGTATAAAGCGAAGTTCACTCATTCAAGATTAGGA AATATGTAGTATTTACAGTATCGCTGAAATATCTATTACAGCCATGCATC CCTTTAAAAAACTATCAAATATGTAACTAAAGCTCAATGATTCGATAACg tttaaaaacatttcttttgtttttttagccGTTCACGAGAATGAAAATGT AGAATCAATGGCTGATTTAAAGGTGAATGGGCGAATTTTTATCTTTAATC GAAACCTGACTATGAAATAGTTTGCTGAATCCTGTCTTTCAAATATTCTC AAAGTCTCTCAAAGCATCCTTTTTGAACAATTTGGCTAACGTTAGAGGTG TAAATCTAGAAATGTTCATGTACCCGTCCATGGCAGAAGTAAATtctagt aagtaagtaagtctgcgaccgcagtcggaggcgacccgaaggctcctctt tcgatagctatctacccgaaggtaggggagggcgccactctttctccctN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggcatcaagtaccattttgg gaatctttggtatgacccggctgggggttgaacccacaaccttgcgaacc gtagctggatgctctaccactgtactacggtcgaaGTAAATTCTAAGACT CTATTCTATCGATCAAATCTCCAAAAACAATCGCAATCATACAGTACCAT AAACCaaacatattttcctttttttaattgATATCCTATTAACTTtctgt tttaattttcagaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAGG TAATTTTCTTCTCTCAATCCACTATTTCGACGATAGTTGAAGCAGTCCTG ATTTTGATGAGTTCACCCGTTATTTCTTGATTAGTTAAAATGGTATGAAG GaatttttgaaagactttttcttattttccaaaGCAGTAACATCTATTCC CATTCCCGTAAAGGTTCGAAACGTAAAGAAAAAGAAGCAGAACGCGAtcg gaaagaaaaagaaagactGAAACAAGCAGAAGAAGAAAACAGGAAAAACT TGATCGCTTTCCAACGAAGACAGGTTTGCATACCCAAATGCATTTTTGTG CCAGTATTAttttccactgacctttatcTTTATTAGGAGCAGCCCTTTAC CCCTGTCGTTGTTTCCCTAAAGAACCATGTTTTCCACTCCTTAAACGTCT TTTGATGAGTACAAACAAAATCGAAGATGAAAACGACGAAAATCATTATT GCTctctgaaagaaaaaacattttaaaaacagaCACCAAGCACCAAAACA AAAGATTCATCCCGATTTTCCAAAGCTCTTTTAACTACTGTTATATTTAT GAAAcctatttcatttttgtttcaGATATACTACTTGAACAAGATCATGA CCAAACTGGAAAGTGataattttgagaaattcaaactgaCCCAACTCGGT GCACCTGTTTGACTTAAAGATTAGGATCCATTTataattaataaaatttt tttaaagacacaTTAATCTAGGTATCCTAggttttattatttattttaat taAAGTAATTTATCAACTAGAATAGAAAATGATAAGGTGAGAAAAAAGAT CACCACTTCCGTAGCATTTTCAGATCTTGACTCTATATCACAATAATTTG ACTATATACGGtatattttgttataattttttatctaaaacaaaatttac aagTACAATATAAgacaaaataaattaaaaatgaaatttgtaaaaataaa tttacaacatgaaaagtttttaaaaaagggaGCAAGCGGATGAATATTTG AAAACAGTTCAATTGTGTCTTTTTTGCgtttaccatttttcaaaaacccc GAAGGATTTCACACATGGCTGTATGAACCTTAAAAGGTCTAAAATAAcac agaaaacaaaacaaaaatgactATAGATTATATCAAacaattaataaata aataatttggCCAGATAATTTCTCAGAAAAACCTATCTGTTCTCAACAGT TTTGGTGTCGGGTAGTCGCCGGTATTCATCATCACAAACAATTATTTAAT TAACCTGGGTACTAAAATGTGGACTGTCAAGGAGCGCTTCTACATCCTCA AATTATTTGCATACTTTGAGATCGATTCTAACAACAAAGCATTTGCCCTA CTATCCAATTTTCTCCATTTCAGGCCATTTTTCGACACGGCGTTTATCAG CAATCGGTAAAGTACCATCCATTAACCGATCTAGCCATGCAGGGAGCTCT CTTTTCGATTGGATCGCCTGGCGAGCAGCCAGTTCATCCTCGCTCTCATC TAAACCGAGAAATTCAGGAGACATGTTGCTAGTGTTATCTAATTGATTTT TGGGTCGATAAATATAAAAGTATTTTCGTGAACCGTTGAAAGCGATGACC GATCCAGGAGGGAATTCACCGAACTTGTTACTATTAGTCATTTCGTTGCA CCACATCAAATGTTCAGCTAACGATAACCAGGCGAAACGTAACTTTGGAT TCCTGAAAAAATGAATTAGAGGATGTAGTTTTTTGATATCACTCAAAATG GTAAAATGAGGGATttgaaaatttatgtttttttgtgttCCTTGAGAGAC CAACCTTCACATACATTGTTTTTCTTAGGCCTTTGAATAGTCTATGTGGT Tac

Coding sequence (CDS) from alignment at sc0000211:155483..160285+

>TCONS_00015421 ID=TCONS_00015421|Name=TCONS_00015421|organism=Clytia hemisphaerica|type=CDS|length=5985bp|location=Sequence derived from alignment at sc0000211:155483..160285+ (Clytia hemisphaerica)
ATGATCCAGAATTGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGA
CGTTTGGCAGCTAAATGataattgtaaaaataaaataggTGGTAAAACTT
TGCAGCAGCAAACAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTT
GTTGGATCTTGTAATGATGGACTGAATAACTTATCTaagtttgaagaaaa
ttatAAAACTTCTCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACT
TTTCGCCACCTTCGTTATCGAGGAGACAGTTTACAATTTCACTTGATAAC
GAACTTCATAAACGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAA
CTTGACATGCTCAACTTCTGTATTTCATAACTGTTCATCATTTACAACAG
AAAATATCTTGCCAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGG
GAGCCAAAAAACAGAACagtaaaagataaaaaagtaaatggtaaaaagaa
aaagaaaatccgTATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAA
GGAAAAATAACGACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAA
TCATCCCGAATCACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAA
CTGCAACGAGAGGATATCgatcaaatcttttttcaacAAGAAAAAGAACA
CTGTTCATGACCCTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCT
CCATCAAAGAAACGGAATGATTATCCAAATCATAACAATAATAACCATGA
TTACAGAAAAAGTTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGG
TTTATTATTCAGAAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATG
GTGCCACCAAGTACACCAGccGTTCACGAGAATGAAAATGTAGAATCAAT
GGCTGATTTAAAGaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAG
GTTCGAAACGTAAAGAAAAAGAAGCAGAACGCGAtcggaaagaaaaagaa
agactGAAACAAGCAGAAGAAGAAAACAGGAAAAACTTGATCGCTTTCCA
ACGAAGACAGATATACTACTTGAACAAGATCATGACCAAACTGGAAAGTG
ataattttgagaaattcaaactgaCCCAACTCGGTGCACCTGTTTGAATG
ATCCAGAATTGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGACGT
TTGGCAGCTAAATGataattgtaaaaataaaataggTGGTAAAACTTTGC
AGCAGCAAACAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTTGTT
GGATCTTGTAATGATGGACTGAATAACTTATCTaagtttgaagaaaatta
tAAAACTTCTCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACTTTT
CGCCACCTTCGTTATCGAGGAGACAGTTTACAATTTCACTTGATAACGAA
CTTCATAAACGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAACTT
GACATGCTCAACTTCTGTATTTCATAACTGTTCATCATTTACAACAGAAA
ATATCTTGCCAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGGGAG
CCAAAAAACAGAACagtaaaagataaaaaagtaaatggtaaaaagaaaaa
gaaaatccgTATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAAGGA
AAAATAACGACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAATCA
TCCCGAATCACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAACTG
CAACGAGAGGATATCgatcaaatcttttttcaacAAGAAAAAGAACACTG
TTCATGACCCTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCTCCA
TCAAAGAAACGGAATGATTATCCAAATCATAACAATAATAACCATGATTA
CAGAAAAAGTTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGGTTT
ATTATTCAGAAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATGGTG
CCACCAAGTACACCAGccGTTCACGAGAATGAAAATGTAGAATCAATGGC
TGATTTAAAGaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAGGTT
CGAAACGTAAAGAAAAAGAAGCAGAACGCGAtcggaaagaaaaagaaaga
ctGAAACAAGCAGAAGAAGAAAACAGGAAAAACTTGATCGCTTTCCAACG
AAGACAGATATACTACTTGAACAAGATCATGACCAAACTGGAAAGTGata
attttgagaaattcaaactgaCCCAACTCGGTGCACCTGTTTGAATGATC
CAGAATTGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGACGTTTG
GCAGCTAAATGataattgtaaaaataaaataggTGGTAAAACTTTGCAGC
AGCAAACAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTTGTTGGA
TCTTGTAATGATGGACTGAATAACTTATCTaagtttgaagaaaattatAA
AACTTCTCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACTTTTCGC
CACCTTCGTTATCGAGGAGACAGTTTACAATTTCACTTGATAACGAACTT
CATAAACGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAACTTGAC
ATGCTCAACTTCTGTATTTCATAACTGTTCATCATTTACAACAGAAAATA
TCTTGCCAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGGGAGCCA
AAAAACAGAACagtaaaagataaaaaagtaaatggtaaaaagaaaaagaa
aatccgTATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAAGGAAAA
ATAACGACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAATCATCC
CGAATCACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAACTGCAA
CGAGAGGATATCgatcaaatcttttttcaacAAGAAAAAGAACACTGTTC
ATGACCCTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCTCCATCA
AAGAAACGGAATGATTATCCAAATCATAACAATAATAACCATGATTACAG
AAAAAGTTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGGTTTATT
ATTCAGAAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATGGTGCCA
CCAAGTACACCAGccGTTCACGAGAATGAAAATGTAGAATCAATGGCTGA
TTTAAAGaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAGGTTCGA
AACGTAAAGAAAAAGAAGCAGAACGCGAtcggaaagaaaaagaaagactG
AAACAAGCAGAAGAAGAAAACAGGAAAAACTTGATCGCTTTCCAACGAAG
ACAGATATACTACTTGAACAAGATCATGACCAAACTGGAAAGTGataatt
ttgagaaattcaaactgaCCCAACTCGGTGCACCTGTTTGAATGATCCAG
AATTGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGACGTTTGGCA
GCTAAATGataattgtaaaaataaaataggTGGTAAAACTTTGCAGCAGC
AAACAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTTGTTGGATCT
TGTAATGATGGACTGAATAACTTATCTaagtttgaagaaaattatAAAAC
TTCTCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACTTTTCGCCAC
CTTCGTTATCGAGGAGACAGTTTACAATTTCACTTGATAACGAACTTCAT
AAACGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAACTTGACATG
CTCAACTTCTGTATTTCATAACTGTTCATCATTTACAACAGAAAATATCT
TGCCAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGGGAGCCAAAA
AACAGAACagtaaaagataaaaaagtaaatggtaaaaagaaaaagaaaat
ccgTATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAAGGAAAAATA
ACGACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAATCATCCCGA
ATCACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAACTGCAACGA
GAGGATATCgatcaaatcttttttcaacAAGAAAAAGAACACTGTTCATG
ACCCTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCTCCATCAAAG
AAACGGAATGATTATCCAAATCATAACAATAATAACCATGATTACAGAAA
AAGTTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGGTTTATTATT
CAGAAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATGGTGCCACCA
AGTACACCAGccGTTCACGAGAATGAAAATGTAGAATCAATGGCTGATTT
AAAGaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAGGTTCGAAAC
GTAAAGAAAAAGAAGCAGAACGCGAtcggaaagaaaaagaaagactGAAA
CAAGCAGAAGAAGAAAACAGGAAAAACTTGATCGCTTTCCAACGAAGACA
GATATACTACTTGAACAAGATCATGACCAAACTGGAAAGTGataattttg
agaaattcaaactgaCCCAACTCGGTGCACCTGTTTGAATGATCCAGAAT
TGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGACGTTTGGCAGCT
AAATGataattgtaaaaataaaataggTGGTAAAACTTTGCAGCAGCAAA
CAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTTGTTGGATCTTGT
AATGATGGACTGAATAACTTATCTaagtttgaagaaaattatAAAACTTC
TCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACTTTTCGCCACCTT
CGTTATCGAGGAGACAGTTTACAATTTCACTTGATAACGAACTTCATAAA
CGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAACTTGACATGCTC
AACTTCTGTATTTCATAACTGTTCATCATTTACAACAGAAAATATCTTGC
CAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGGGAGCCAAAAAAC
AGAACagtaaaagataaaaaagtaaatggtaaaaagaaaaagaaaatccg
TATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAAGGAAAAATAACG
ACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAATCATCCCGAATC
ACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAACTGCAACGAGAG
GATATCgatcaaatcttttttcaacAAGAAAAAGAACACTGTTCATGACC
CTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCTCCATCAAAGAAA
CGGAATGATTATCCAAATCATAACAATAATAACCATGATTACAGAAAAAG
TTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGGTTTATTATTCAG
AAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATGGTGCCACCAAGT
ACACCAGccGTTCACGAGAATGAAAATGTAGAATCAATGGCTGATTTAAA
GaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAGGTTCGAAACGTA
AAGAAAAAGAAGCAGAACGCGAtcggaaagaaaaagaaagactGAAACAA
GCAGAAGAAGAAAACAGGAAAAACTTGATCGCTTTCCAACGAAGACAGAT
ATACTACTTGAACAAGATCATGACCAAACTGGAAAGTGataattttgaga
aattcaaactgaCCCAACTCGGTGCACCTGTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008616XLOC_008616Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015421-exon-sc0000211-1491911889:155483..157498TCONS_00015421-exon-sc0000211-1491911889:155483..157498Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1510915933:155483..157498TCONS_00015421-exon-sc0000211-1510915933:155483..157498Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1575043694:155483..157498TCONS_00015421-exon-sc0000211-1575043694:155483..157498Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1491911889:157661..157704TCONS_00015421-exon-sc0000211-1491911889:157661..157704Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1510915933:157661..157704TCONS_00015421-exon-sc0000211-1510915933:157661..157704Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1575043694:157661..157704TCONS_00015421-exon-sc0000211-1575043694:157661..157704Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1491911889:158395..158431TCONS_00015421-exon-sc0000211-1491911889:158395..158431Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1510915933:158395..158431TCONS_00015421-exon-sc0000211-1510915933:158395..158431Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1575043694:158395..158431TCONS_00015421-exon-sc0000211-1575043694:158395..158431Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1491911889:158596..158705TCONS_00015421-exon-sc0000211-1491911889:158596..158705Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1510915933:158596..158705TCONS_00015421-exon-sc0000211-1510915933:158596..158705Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1575043694:158596..158705TCONS_00015421-exon-sc0000211-1575043694:158596..158705Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1491911889:159008..160285TCONS_00015421-exon-sc0000211-1491911889:159008..160285Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1510915933:159008..160285TCONS_00015421-exon-sc0000211-1510915933:159008..160285Clytia hemisphaericaexon
TCONS_00015421-exon-sc0000211-1575043694:159008..160285TCONS_00015421-exon-sc0000211-1575043694:159008..160285Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015421-proteinTCONS_00015421-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:155483..160285 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.64078 1.75958 1.41411 1.55372 15.6175 12.4435 14.0289 15.2986 9.32307 9.12756 8.7137 6.76498 3.42479 3.07213 1.59141 2.61809 2.51966 3.25585 2.41798 2.44013 2.87891 2.25879 3.9377 3.98126 51.9696 32.8494 3.51296 2.8738 2.11788 2.58019
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015421 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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