XLOC_008616 (gene) - C. hemisphaerica

Overview
NameXLOC_008616
Unique NameXLOC_008616
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000211:155483..160285+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008616 ID=XLOC_008616|Name=XLOC_008616|organism=Clytia hemisphaerica|type=gene|length=4803bp|location=Sequence derived from alignment at sc0000211:155483..160285+ (Clytia hemisphaerica)
CTTTTCTCTGTCAATTTTTTCCCCACCATTTTCGATGTTGTTGTCTGGGT CTTGCAGTTCACTCAATCGCTTTAATTTGTCTTGAATACCCATTGTATAA AGGttctatttcaaaaaaagaaattggattttaggggtcactcacaaatc gattttaagttcAAATAACGTCATATGACGTTTGTGGGTGGGTGGGTCAA GGTAGGATGACGCTTTGAATGGGTTATAAAAAACATCGATTTTGAGATAG AGCTTTCATCTAATATATTATCTCTTTTCTATTTTGTATAATGAAAGAAT AAAAAATATAAGTGAAATGATATAAAGTACAGAACAAACAGTCAAACCAT AACCAGACAAACCAGACCCCTCAAAAGTTAAGTTTGTATAACGACGGCTC GACTTTGATCGCTGCATTTTGTATTTTGTTGACTGTTGGACTTAGACGAA GAGCACCTCGAAAATTATCAAATAAAAGGAAAGCTGCGGAAAAGAATACG GAAGTCTCGGAAAAAAGAATACGGAACTATTTGTCCGCCGAAACATTTTC ATTTTTTGCACGCGTCACACTCCAGCTGGAAGCAACGAGTACTTTGGGCA AGCATCGAGCTTTATCAGTCTGGGCAAGTCGGGTCTAGAAACCAGTGGTC AAAGCGGCGTTGGTTTGGTTGGTTGGTTGCAACGCTCGAGTCGAAAATAT GGTGATGGCGTTGAGCATGAGTTGGTGTTGGTTTTGACGTTTTGGCTGAA GAAGTACCAGATTTTTTTGAGTGACGTTAtgtggggtgggtgggtgtgcT AGCTATCAAAACGTCATATGACGTTATTTgaacttaaaatcgatttgtga gtgaccccttaatGCCTCCAAAACTGCAAAATTAACTTTCGATTTGAGGT CACGCTGCTTTGGCTACCATTTTAACTATTCTATGTTCTGCAAAGTACAC TTTTTCGTAGCAACGTTCGAAGCTTGCCGgtttcaagatggcggttttgt tttgatttttcatcagCTGATTGTTCACTGAGTAACACATTGGTGTAGGT GTATGTGCTCTAAGTCAGAGTAAAAAACGTTGGCAAAAAGAGTGGAGATG ATCCAGAATTGTCGTCCAAATAAATATAAGTCGAGTTTTTCATATGACGT TTGGCAGCTAAATGataattgtaaaaataaaataggTGGTAAAACTTTGC AGCAGCAAACAGATGCCTCTGAAAAAATATACCATCCCTTTTTGGTTGTT GGATCTTGTAATGATGGACTGAATAACTTATCTaagtttgaagaaaatta tAAAACTTCTCTTAGTACTCGTTCTATCGACAGGTTATCTCGGAACTTTT CGCCACCTTCGTTATCGAGGAGACAGTTTACAATTTCACTTGATAACGAA CTTCATAAACGAAGGTCCAGTGGTAGTGGAAGACAACATCCTTCAAACTT GACATGCTCAACTTCTGTATTTCATAACTGTTCATCATTTACAACAGAAA ATATCTTGCCAGGAGTAGAGTGCAAAACGATCACATCATCAAAAAGGGAG CCAAAAAACAGAACagtaaaagataaaaaagtaaatggtaaaaagaaaaa gaaaatccgTATCAAACCAAAGAGAGACATTTCTCCTACATCGCAAAGGA AAAATAACGACACGCTCGACAAAGAGACAAAGAAATCATCCCCGAAATCA TCCCGAATCACATTTTCGTTTACGAAAAGAACAACCAGTAACAATAACTG CAACGAGAGGATATCgatcaaatcttttttcaacAAGAAAAAGAACACTG TTCATGACCCTTCAATAAAATTCTCAGACCCTTCTCCATGCTCTTCTCCA TCAAAGAAACGGAATGATTATCCAAATCATAACAATAATAACCATGATTA CAGAAAAAGTTTACCAACTTCACCACAAAAGAGTAGTAGCAGAAGGGTTT ATTATTCAGAAAAACAATCTCTGAGTGATGCAAATGGTATCCCAATGGTG CCACCAAGTACACCAGGTATAAAGCGAAGTTCACTCATTCAAGATTAGGA AATATGTAGTATTTACAGTATCGCTGAAATATCTATTACAGCCATGCATC CCTTTAAAAAACTATCAAATATGTAACTAAAGCTCAATGATTCGATAACg tttaaaaacatttcttttgtttttttagccGTTCACGAGAATGAAAATGT AGAATCAATGGCTGATTTAAAGGTGAATGGGCGAATTTTTATCTTTAATC GAAACCTGACTATGAAATAGTTTGCTGAATCCTGTCTTTCAAATATTCTC AAAGTCTCTCAAAGCATCCTTTTTGAACAATTTGGCTAACGTTAGAGGTG TAAATCTAGAAATGTTCATGTACCCGTCCATGGCAGAAGTAAATtctagt aagtaagtaagtctgcgaccgcagtcggaggcgacccgaaggctcctctt tcgatagctatctacccgaaggtaggggagggcgccactctttctccctN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggcatcaagtaccattttgg gaatctttggtatgacccggctgggggttgaacccacaaccttgcgaacc gtagctggatgctctaccactgtactacggtcgaaGTAAATTCTAAGACT CTATTCTATCGATCAAATCTCCAAAAACAATCGCAATCATACAGTACCAT AAACCaaacatattttcctttttttaattgATATCCTATTAACTTtctgt tttaattttcagaGTCAAAGAAATATTGTTCAAAAGCTTCTAAAGATAGG TAATTTTCTTCTCTCAATCCACTATTTCGACGATAGTTGAAGCAGTCCTG ATTTTGATGAGTTCACCCGTTATTTCTTGATTAGTTAAAATGGTATGAAG GaatttttgaaagactttttcttattttccaaaGCAGTAACATCTATTCC CATTCCCGTAAAGGTTCGAAACGTAAAGAAAAAGAAGCAGAACGCGAtcg gaaagaaaaagaaagactGAAACAAGCAGAAGAAGAAAACAGGAAAAACT TGATCGCTTTCCAACGAAGACAGGTTTGCATACCCAAATGCATTTTTGTG CCAGTATTAttttccactgacctttatcTTTATTAGGAGCAGCCCTTTAC CCCTGTCGTTGTTTCCCTAAAGAACCATGTTTTCCACTCCTTAAACGTCT TTTGATGAGTACAAACAAAATCGAAGATGAAAACGACGAAAATCATTATT GCTctctgaaagaaaaaacattttaaaaacagaCACCAAGCACCAAAACA AAAGATTCATCCCGATTTTCCAAAGCTCTTTTAACTACTGTTATATTTAT GAAAcctatttcatttttgtttcaGATATACTACTTGAACAAGATCATGA CCAAACTGGAAAGTGataattttgagaaattcaaactgaCCCAACTCGGT GCACCTGTTTGACTTAAAGATTAGGATCCATTTataattaataaaatttt tttaaagacacaTTAATCTAGGTATCCTAggttttattatttattttaat taAAGTAATTTATCAACTAGAATAGAAAATGATAAGGTGAGAAAAAAGAT CACCACTTCCGTAGCATTTTCAGATCTTGACTCTATATCACAATAATTTG ACTATATACGGtatattttgttataattttttatctaaaacaaaatttac aagTACAATATAAgacaaaataaattaaaaatgaaatttgtaaaaataaa tttacaacatgaaaagtttttaaaaaagggaGCAAGCGGATGAATATTTG AAAACAGTTCAATTGTGTCTTTTTTGCgtttaccatttttcaaaaacccc GAAGGATTTCACACATGGCTGTATGAACCTTAAAAGGTCTAAAATAAcac agaaaacaaaacaaaaatgactATAGATTATATCAAacaattaataaata aataatttggCCAGATAATTTCTCAGAAAAACCTATCTGTTCTCAACAGT TTTGGTGTCGGGTAGTCGCCGGTATTCATCATCACAAACAATTATTTAAT TAACCTGGGTACTAAAATGTGGACTGTCAAGGAGCGCTTCTACATCCTCA AATTATTTGCATACTTTGAGATCGATTCTAACAACAAAGCATTTGCCCTA CTATCCAATTTTCTCCATTTCAGGCCATTTTTCGACACGGCGTTTATCAG CAATCGGTAAAGTACCATCCATTAACCGATCTAGCCATGCAGGGAGCTCT CTTTTCGATTGGATCGCCTGGCGAGCAGCCAGTTCATCCTCGCTCTCATC TAAACCGAGAAATTCAGGAGACATGTTGCTAGTGTTATCTAATTGATTTT TGGGTCGATAAATATAAAAGTATTTTCGTGAACCGTTGAAAGCGATGACC GATCCAGGAGGGAATTCACCGAACTTGTTACTATTAGTCATTTCGTTGCA CCACATCAAATGTTCAGCTAACGATAACCAGGCGAAACGTAACTTTGGAT TCCTGAAAAAATGAATTAGAGGATGTAGTTTTTTGATATCACTCAAAATG GTAAAATGAGGGATttgaaaatttatgtttttttgtgttCCTTGAGAGAC CAACCTTCACATACATTGTTTTTCTTAGGCCTTTGAATAGTCTATGTGGT Tac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015421TCONS_00015421Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015421-proteinTCONS_00015421-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:155483..160285 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.64 1.76 1.41 1.55 15.62 12.44 14.03 15.3 9.32 9.13 8.71 6.76 3.42 3.07 1.59 2.62 2.52 3.26 2.42 2.44 2.88 2.26 3.94 3.98 51.97 32.85 3.51 2.87 2.12 2.58